Mesorhizobium ciceri CC1192: A4R28_26080
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Entry
A4R28_26080 CDS
T08712
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mcic
Mesorhizobium ciceri CC1192
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_26080
Enzymes [BR:
mcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R28_26080
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A4R28_26080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
DEAD
OSBS_N
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AMX96222
LinkDB
All DBs
Position
5397034..5400552
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AA seq
1172 aa
AA seq
DB search
MKKAYPIPSDTATSQARAADPGNSAWVSANAGSGKTHVLAQRVIRLLLRGTDPSKILCLT
YTRAAAANMSNRVFSTLSEWTTLGDVDLAAKVEALEGRRPDLETMRRARRLFAEALETPG
GLKIQTIHAFCESVLHQFPLEANIPAHFEMLDGQMEASLFAAARREMISGTSAGDRDLAE
AFASILDRGGEAGLDALLGEIVRKRDGLRHFIEAVGRDGTHFQALFDEFHFHPGQTAEGI
AASVWPLPGFLPDYFAGFAHAAEATDARSVLNNILPYARQAFAEGDPIRRLQLLARAFLK
TDGDAYDPAKAFKKALVDRLPDLAERYLSAANAIVETTDRLALFRMLEGTAAALTIADWL
IARYEMLKRSRGFLDFNDLITRTVNLLARPDAGPWVQYKLDQGIDHILLDEAQDTSPDQW
EVVKRLAEEFFAGFGARDRVHRTVFAVGDEKQSIYSFQGAAPDSFADSRLLFAGRVRDAE
ASFADLKLTWSFRSTDDVLTAVDRVFADPAVRRGISHDPDPLRHQAIRTDAPGYVEVWPS
VGADVVDEPDDWTQAIDHAHAPAVRVAENVAATIAGWIGSGEIIEGRGKRLRPGDVLVLV
RKRDRFVHALTRALKRRDIPVAGADRLSLPGHIAVKDLIALGHLLIQPQDDLSLAAVLRS
PIFDLPEEALFTLAAQRPAGLSLIASLRQHAGESERLAKIVAQVDIWTNEAAFKPVFEFY
AALLARDGVRRKMIARLGPEAGDILDEFLSFCLAEERTGLPGLEAFLSTLENAGPEIKRE
MDQTRDEVRVMTVHAAKGLEAPVVFLVDGGSAPFSDQHLPRLMPFDGSGANWDGKGYLWR
SASEVANGFSKAAASRARELADDEYRRLLYVGMTRAEDRLIVCGYHGKRAPNAGTWHSIV
SRALIGASESEQRAHPAGGEPVHRFHVTKLPPVAPSSADQLRQADAFAPLPATLFRPLLP
FEDLPRPLSPSGASALIDEGKQAVVDKASPVLDADAEPGFAVLRGLALHKLLQMLPGIAE
PERAGAAERYLLRTGADWPPSEREKALASVTSILADPGFGQLFAPSSRAEVAIMGSLEVK
GKKRSISGKIDRLAVTPDTVSIVDYKTNRPAPASLAEVPPAYVLQLALYRALLQPLYPGR
TVKAALLFTEAPRLIELPASALDDALARLTGA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcctatcccattcccagcgacaccgcgaccagccaggcccgcgccgccgac
cccggcaattccgcctgggtgtcggccaatgccggctccggcaagacccatgtgctggcg
cagcgcgtaatccggctgctgctgcgcggcaccgatccgtcgaagatcctgtgcctgacc
tatacgcgcgccgccgccgccaacatgtcgaaccgggtcttttcgacactgtcggagtgg
acgacgcttggtgacgtggatctggcggcaaaggtcgaggcgctggaggggcgccggccc
gatctcgagaccatgcgccgggcgcggcgcctgttcgccgaggcgctggaaacgcccggc
gggctgaagatccagaccattcacgccttctgcgaatcggtgctgcaccagttcccgctg
gaggccaacatcccggcccatttcgagatgctcgacggccagatggaggcatcgctgttt
gccgcggcgcgccgcgagatgatttcgggcacgtccgccggtgacagggatctggccgag
gcttttgcctccattctcgatcggggcggcgaagccgggctcgacgccttgctgggtgag
attgtgcgcaagcgcgacggcttgcgccatttcatcgaggcggtcgggcgcgatggcacg
catttccaggccctgttcgacgaattccatttccatccaggccagacggccgagggcata
gccgcttcggtatggccgttgccgggcttcctgcccgactattttgccggcttcgcccac
gccgccgaggccaccgacgccagatcggtactgaacaacatcctgccctatgcgcggcag
gcttttgccgagggcgatcccattcgccgcctgcaactgctcgcgcgagccttcctcaag
accgatggcgacgcttacgacccggcaaaggccttcaagaaggccctggtcgaccggttg
ccggatctggcggagcgttatctctcggccgccaacgccatagtcgaaaccaccgatcgg
ctggccctgttccggatgcttgaaggcacggctgccgcgctgaccatcgccgactggctg
atcgcccgctacgaaatgctcaagcgcagccgcggcttcctcgatttcaacgacctgatc
acccgcaccgtcaacctgctggcgcggccggacgccggcccctgggtgcagtacaagctc
gaccagggcatcgaccacatcctgctcgacgaggcgcaggacaccagtccggaccaatgg
gaagtggtgaaacggctggcggaggaattctttgccggctttggcgcacgcgacagggtc
catcgcacggtgttcgccgtcggcgacgagaagcagtcgatctattcgttccagggtgcg
gccccggactccttcgccgacagccggctgttgtttgccggacgagtgcgtgacgccgag
gcgtccttcgccgacctcaagctgacctggtcgttccgctcgaccgacgatgttctgacc
gcggtcgaccgcgtcttcgccgatccagccgtgcggcgcggcatcagtcatgatcccgat
ccgcttcgccaccaggcgatccgcaccgacgcgccgggctatgtcgaggtgtggccgtcg
gtcggcgccgatgttgtcgatgagcccgacgactggacgcaagccatcgaccatgcccac
gcgccggcggtgcgcgtggccgagaacgtcgccgccaccatcgccggctggatcggcagt
ggcgaaatcatcgaaggccgcggcaagcggctgcggccgggcgatgtgctggtgctggtg
cgcaagcgcgatcgcttcgtccatgccctgacccgcgcactcaaacgccgcgacattccg
gttgccggcgccgaccggttgagcctgcccgggcacatcgcggtcaaggacctgatcgcg
ctcggtcacctcctcatccagccgcaggacgatttgtcgcttgccgccgtgttgcgcagc
ccgatcttcgatctgccggaagaggcgcttttcacgctcgccgcgcagaggccggccggc
ctgtcattgatcgcatcgctgcgacagcacgccggcgaaagcgagagactggcgaagatc
gtcgcccaggtcgacatctggacgaacgaagccgcgtttaagccagtgttcgaattctac
gccgccctgctggcgcgcgatggcgtgcgccgcaagatgatcgcgcggctcgggcccgaa
gctggcgatattctcgacgagttcctcagcttctgccttgccgaggagcgaaccggcctg
ccggggctggaagccttcctgtcgacactggaaaacgccggtcccgagatcaagcgcgag
atggaccagacccgcgacgaggtccgggtcatgaccgtgcacgccgccaagggcttggaa
gcgcccgtcgtgttcctggtcgatggcggttccgcgccgttcagcgaccagcatttgccg
cgcctgatgcccttcgatggctccggcgcgaactgggacggcaagggctatctctggcgc
tcggccagcgaggtcgccaacggtttttcgaaagcggcggcctcaagggcacgggaactc
gccgacgacgaataccgccggctgctctatgtcggcatgacccgtgccgaggaccggctg
atcgtctgcggctatcatggcaagcgggcgccgaacgccggcacctggcactcgatcgtc
agccgcgcgctgatcggcgcgtcggagagcgagcagcgtgcgcatcccgccggcggcgag
ccggtgcaccgtttccatgtcaccaagctgccccccgtcgcgccaagttccgccgatcag
ctacggcaggccgacgctttcgcgcctttgccggcgacgctgttccggcccttgctgccc
ttcgaggatctgccgcgtccgttgtcgccatcgggcgcctcggcgctgatcgacgaaggc
aagcaagccgttgtcgacaaggcgtcgccggtgctcgacgccgacgccgagcccggcttt
gccgtgctgcgtgggctcgccctccacaaactgctgcagatgctgcccggtattgccgag
cccgaacgtgcgggagcggcagaacgctatctcttgcgaaccggtgcggactggccgcca
tcagagcgtgaaaaggccctggcgtcggtcacatcgatccttgccgatcccggcttcggt
cagctgtttgcgccatcgtcgcgtgccgaggttgcgatcatgggcagcctggaggtcaag
ggcaagaagcgctcgatttccggcaagatcgaccggctggcggtaacgccggacacggta
tcgattgtcgactacaagaccaaccggccggcgcccgccagtctggccgaggtgccgccg
gcctatgtcctgcagttggcgctctaccgcgcgctgttgcagccgctctatcccggccgc
acggtcaaggcggccttgctgttcaccgaggcgccgcggctgatcgaactgcctgccagc
gccttggacgacgcccttgctcgactcacgggagcgtga
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