Mesorhizobium ciceri CC1192: A4R28_26565
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Entry
A4R28_26565 CDS
T08712
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4R28_26565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_26565
Enzymes [BR:
mcic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A4R28_26565
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4R28_26565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AMX96310
LinkDB
All DBs
Position
complement(5500814..5502271)
Genome browser
AA seq
485 aa
AA seq
DB search
MRPAELDLARYRVRLDSETDFAGWRDAARRLALNEVRPEDVDWHVAPGSDQAQLPEVPAG
AQLVVPRDFLGHAETAFCHSDPGRFAFLYRMLWRLRDEAKLLEIASDSDTRRLEAMEKAV
RRDSHKMHAFVRFRKIGDGADERYVAWFEPDHFIVERNADFFVRRFTGMRWTILTPYASA
DWDGERLAIGPGAAKGDAPDQDDTEALWRTYFENIFNPARLKVKTMQKEMPKKYWRNLPE
ASLIPDMIAGADKAAKDMIAKMPTTPAPHHAKVQARHWPKQPVEAPEDDASTIPELREAA
KGCRRCPLWRDATQTVFGEGPDNAKVIFVGEQPGDQEDLAGKPFVGPAGKVFDAILDDAG
VDRQKVYVTNAVKHFKFEPRGKRRIHSKPNSGEIQACRWWIDQEFELIKPNLAVALGATA
AMSLLGKAIPVTKMRGQVIEREDGLRVFITIHPSFILRIREPADKEAERERFLQDMKLVK
RLMAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcggccggcggaactcgatctcgccagatacagagttcggctcgacagcgagacggat
tttgccggctggcgtgacgcggcacggcggctggccttgaatgaggtcaggcccgaggac
gtcgactggcatgtcgcgccaggctctgatcaggcacaattgcctgaagtgcctgcgggc
gcgcaactcgtcgtgccgcgcgacttcctcgggcatgccgaaacggcgttctgccattcc
gatcccggccggtttgcctttctctaccgaatgctgtggcgattgcgcgacgaagctaaa
ctgctggaaatcgcgtcggattccgacaccaggcggctcgaggccatggagaaggcggtg
cggcgcgacagccacaagatgcacgccttcgtacgtttccggaaaatcggcgacggtgcc
gatgagcgctatgtcgcctggttcgagccggatcatttcatcgtcgagcgcaacgccgat
ttcttcgtcagacgtttcaccggcatgcgctggacgatcctgaccccttatgcctctgcc
gactgggatggcgaaaggctggcgatcgggccgggcgcggccaagggcgatgcgcctgat
caggacgataccgaggcgctctggcgcacctatttcgagaacatcttcaacccggcgcga
ttgaaggtgaaaaccatgcagaaggagatgccgaagaaatattggcggaaccttcccgag
gcctcgctcattccagacatgatcgcaggagcggacaaggccgccaaggacatgattgcg
aagatgccgacaacacccgcgccgcaccacgcaaaggtgcaggcacggcattggccgaag
cagcccgtcgaagcaccggaagatgatgcaagcacgattccggaattgcgcgaggcagcg
aaaggctgccgccgctgcccgctgtggcgcgacgcgacgcagaccgtcttcggtgaaggc
cctgacaatgccaaggtgatcttcgtcggcgaacagccgggggatcaggaggacctcgcc
ggcaaacctttcgtgggtccggccggcaaggtgttcgatgcgatcctggacgatgccggt
gtcgaccggcaaaaggtctatgtcaccaacgcggtcaagcacttcaagttcgagccgcgc
ggcaagcgccgcatccactccaaaccgaattccggtgagattcaggcctgccgctggtgg
atcgaccaagaattcgagctgatcaagccgaacctcgccgtggcactcggcgcgacagcg
gcgatgtcgctgctcggcaaggcgattccggtgacaaagatgcgcggacaagtgatcgag
cgcgaggacggattgcgcgtgttcatcaccatccatccctccttcatcctgcgcatccgc
gaacccgcggacaaggaggctgaacgcgaacggttcctgcaggacatgaagctggtgaag
cggctgatggccgcctga
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