Mesorhizobium ciceri CC1192: A4R28_28315
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Entry
A4R28_28315 CDS
T08712
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4R28_28315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcic03019
]
A4R28_28315
03016 Transfer RNA biogenesis [BR:
mcic03016
]
A4R28_28315
Enzymes [BR:
mcic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4R28_28315
Messenger RNA biogenesis [BR:
mcic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4R28_28315
Transfer RNA biogenesis [BR:
mcic03016
]
Prokaryotic type
tRNA degradation factors
A4R28_28315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5343
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AMX96623
UniProt:
A0AB38TAE8
LinkDB
All DBs
Position
5886917..5889064
Genome browser
AA seq
715 aa
AA seq
DB search
MFNHHKVEIEWGGRPLILETGKIARQADGAVLATYGETKVLATVVSMKEPKPGLDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFASGYKNDTQIVVTVVQH
DLENDPDILSIVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHVDEMQESKLDLVVA
GTADAVLMVESEAKELGEELMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPRDFTAPDYSA
LEAEMLKIVGDELSNAYKNVDKQKRYAAVDAVKAKVKAAFAPAEGEDAKYTSEQIGSVFK
ELQAKVVRWNILDTGSRIDGRDLKTVRKIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYVDSLTGMYKEKFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSA
DQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTANGITSLQMDIKIEGITEEIMKIALDQAKDGRQHILGEMA
HALTGARSELGEFAPRIEVMHIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNAKEIEAAKKWIHTIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLANDR
VAKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKELARDKKTEGEENAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaccacaaagtggaaatcgaatggggcggtcgtccgctcatcctcgaaacc
ggcaagatcgcgcgccaggctgatggcgcggtgctcgccacctacggcgagaccaaggtc
ctcgccaccgtcgtttcgatgaaggagccgaagcccggcctcgatttcttcccgctgacc
gtcaactaccaggaaaagacctacgccgccggcaagatcccgggtggctatttcaagcgt
gaaggccgtccgagcgagaaggaaacgctggtttcccgcctcatcgaccgcccgatccgc
ccgctcttcgcctccggctacaagaacgacacccagatcgtcgtcaccgtcgtccagcat
gatctcgagaacgatcccgacatcctgtcgatcgttgccacttcggccgccctgacgctc
tccggcgtccccttcatgggcccggtcggcggcgcccgcgtcggctacatcaacggcgaa
tacgttctgaacccgcatgtcgacgagatgcaggaatccaagctcgacctcgttgtcgcc
ggcaccgccgacgctgtgctgatggttgagtccgaagccaaggaattgggcgaagagctg
atgctcggcgccgtcatgttcggccacaagggcttccagccggtcatcgacgccatcatc
aagctggccgaagtcgccgccaaggagccgcgcgacttcaccgcgccggactattccgcg
cttgaagccgagatgctgaagatcgtcggcgacgaactcagcaacgcctacaagaacgtc
gacaagcagaagcgttacgccgccgtcgacgccgtcaaggcgaaggtcaaggcagcgttt
gccccggccgaaggcgaagatgccaagtacacttccgagcagatcggttcggtattcaag
gaactccaggccaaggtcgtgcgctggaacatcctcgacaccggttcgcgcatcgatggc
cgtgacctcaagacggtccgcaagatcgtctccgaagtcggcgtcctgccgcgcacccac
ggttcggcgctgttcacccgcggcgagacccaggcgctggtcgttgccacgctcggcacc
ggcgaggatgagcagtatgtcgattcgctgaccggcatgtacaaggagaagttcctcctt
cactacaacttccctccctattccgtcggcgagaccggccgcatgggttcgccgggtcgc
cgcgaaatcggccatggcaagctcgcctggcgcgccattcgcccgatgctgccgagcgcc
gaccagttcccctacacgctgcgtgtcgtctcggagatcaccgagtccaacggttcgtcg
tcgatggccaccgtctgcggcacctcgctggcgctgatggatgccggcgtgccgctggcc
aagcccgtcgccggtatcgccatgggcctgatcaaggaaggcgagcgtttcgccgttcta
tccgacatcctcggtgacgaggatcacctcggcgacatggacttcaaggtcgccggcacc
gccaacggcatcacctcgctgcagatggatatcaagatcgaaggcatcaccgaggagatc
atgaagatcgcgctggaccaggccaaggatggccgccagcacatcctcggcgagatggcg
catgctctgaccggcgcgcgttcggaactgggtgagttcgcaccgcgcatcgaagtgatg
cacatcccgaccgacaagatccgtgacgtgatcggctcgggcggcaaggtgatccgcgag
atcgtcgaaaagaccggcgccaagatcaacatcgaggacgacggcacggtcaagatcgct
tcgtccaatgccaaggagatcgaggcggcgaagaagtggatccacaccatcgtcgccgag
ccggaagtcggcgagatctacgaaggtacggtcgtcaagaccgcggacttcggcgctttc
gtcaacttcttcggcccgcgtgacggcctcgtccacatctcgcagcttgccaacgaccgg
gtcgccaagacctcggacgtggtcaaggaaggcgacaaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaggtccgcctgtcgatgaaggtcgtcgaccaggccaccggcaag
gaactcgcccgcgacaagaagaccgaaggcgaagaaaacgccgcctga
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