Mycoplasmopsis citelli: NCTC10181_00821
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Entry
NCTC10181_00821 CDS
T07104
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mcit
Mycoplasmopsis citelli
Pathway
mcit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10181_00821 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcit03021
]
NCTC10181_00821 (rpoB)
03400 DNA repair and recombination proteins [BR:
mcit03400
]
NCTC10181_00821 (rpoB)
Enzymes [BR:
mcit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10181_00821 (rpoB)
Transcription machinery [BR:
mcit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10181_00821 (rpoB)
DNA repair and recombination proteins [BR:
mcit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10181_00821 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
VEU74950
UniProt:
A0A449B2Y4
LinkDB
All DBs
Position
1:complement(1054064..1057666)
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AA seq
1200 aa
AA seq
DB search
MSQQNYKIRKFGPKTIRRDYSVTKHSYPVEDILSTSKESFTLFIKKKIQEQLLEIYPIEA
ANKQVSLDYVKNSLRLELPFKKSTSESEEIKKCKAKGINFSVKVYATLKREITGTGEVNT
DEVLIGEIPYMTSGGSFIINGSEKVIVSQLIRSPGAYFGLNVRNKQSDDLFNKVEVLPRI
GSWIEISHKTTSNTLDTVKVKIDKNKNVNLGTFLGSFGLGQDEIIKLFGKSELLEETIRK
NKFISNGEISKEELIDLCQEELFRGLRKGDRISEESKKSLLPGILFDKKRYNLSVTGRYM
LNNKLSVVDRITNTYLAQDVKTKSGEILYHKNTLITINIAKEIAEGFKEGILALETIPGI
DVEHVYHKLIKNNKNLGKRNKIAKIKVYPNKKWMLEKADEPVLVIGNDPRSTEAHLLISD
IVAVVNYYFNLIEGIGQDDDPDALTNKRIVSVGELLEGQLSVALAKLEKTTRERMGAKAP
EKVTGKNVTNNKLVTNQMKTFFNLSKLSQFMDQINPLSEVSNKRRVTSLGPGGLNRDTAQ
FEVRDVHSTHYGRICPIETPEGPNIGLILNYATFAKVNELGFLQTPYFRVKDGIVNYDEV
VYLTAAEEIGYAFAQSSVKVDDNNKIITPTLTIRKDYNYVIGTPLDVDFIEVSSKQIVSL
AATAIPFLENDDANRALMGSNMQRQAVPLLEAEAPYVATGIEADIAKYSSYNLTAKNAGE
VVLVDGSRIHVKQEGGVTDRYFLRNFERSNQGTIIQQKPIVEVGQMVQKGDLLVDGSSFK
DGEMALGKNVLVGFTTWNGYNFEDAIIISERLVKDDVYTSIHIEEQTIQFRSSRAGEDQL
TRDDIPNVSKYSIRHLDEQGIVRVGSEVVAGDVLVGRISPKGEDNPTQEEKLLMAILQQR
PQNVKDTSLKVKNGHNGTVIHVEVLSREKGDVLEDGIDKIVKVSVAQKRKIKVGDKMAGR
HGNKGVISIVLPEEDMPYLEDGTPLDIMLNPQGVPSRMNIGQVLELHLGMAARKLGVKFV
TPSFDGVKKKDIEDALVEAGLDKSGKQTLIDPITGRKFDKPISVGVMYMLKLNHMVDDKM
HARSVGPYSLITQQPLGGKSQNGGQRFGEMETWAIESYGATNVLQEILTYKSDDISGRNA
LYSALVSDTKEIPSPGIPESFNVLSNELKGLGMKLELSQQDSNEEEKINQYLEVAGESYE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaaaactacaaaattcgcaagtttggacctaaaacaataagaagagattat
tcagttaccaagcattcttaccctgttgaagatatcctttcaactagcaaagaaagcttt
acattgtttatcaaaaagaaaattcaagagcaacttcttgaaatttatccaattgaagct
gctaataaacaagtttcacttgattatgttaaaaacagtttacgtttagaattgcctttt
aaaaaatctacttcagaaagtgaagagattaaaaagtgtaaagctaaaggaattaatttt
tcagttaaagtttatgcaactttaaaacgtgaaattactggaacaggagaggttaacacc
gatgaagttttaattggagaaatcccgtacatgacttcaggaggaagttttattatcaat
ggtagtgaaaaagttattgtttctcaacttattcgttcacctggagcttactttggactt
aatgttagaaacaaacaatcagatgatctttttaacaaagttgaagtattacctcgaatt
ggttcgtgaattgaaatttctcacaaaaccacttcaaatacccttgatacagttaaagtt
aaaattgataaaaacaaaaacgttaacttaggaacttttttaggatcatttggacttgga
caagatgaaattatcaaactctttggaaaaagcgaacttttagaagaaaccattagaaaa
aataaattcatttctaatggtgaaatttctaaagaagaacttattgacctttgtcaagaa
gagctttttagaggacttagaaaaggagaccggatttctgaagagtcaaagaaaagtctc
cttccagggattttgtttgataaaaaacgctacaatctttcagttactggaagatacatg
cttaacaataaactttcagtagttgaccgtattactaacacctatttagctcaggatgtt
aaaaccaaaagcggagaaattttataccataaaaatactttaattaccatcaatattgcc
aaagaaattgctgaaggatttaaagaaggtattttagcacttgaaactattccaggaatt
gatgttgaacatgtttatcataagttaattaaaaacaataaaaatcttggtaaaagaaat
aaaattgccaaaattaaagtttatccaaacaaaaaatgaatgcttgaaaaagctgatgaa
ccagttcttgttattggaaatgatcctcgttcaacagaagctcatttacttatttcagat
attgttgcagtagtaaattattactttaatttaattgaaggaattggacaagatgacgat
ccagatgcccttactaataaacggattgttagcgttggagaattacttgaaggacaactt
tctgttgccctagcaaaacttgaaaaaactacccgtgagagaatgggagctaaagcccct
gaaaaagttacagggaaaaatgttactaacaacaaattagtaactaaccaaatgaaaact
ttctttaatttatcaaaactttcgcaatttatggaccaaattaatccactttcggaagtt
tcaaacaaacggagagttacttcacttggacctggtggtttaaatcgtgatactgcccaa
tttgaagttcgggacgtccattcaactcactatggaagaatttgtccaattgaaactcct
gaaggaccaaacattggattaattcttaattacgctacttttgcgaaggttaatgaactt
ggatttttacaaactccttattttagagttaaagacggaattgttaattatgatgaagta
gtttatttaactgctgctgaagaaattggatacgcatttgcacaatcttcagttaaagtt
gatgataataacaaaattattacaccaactttaacaattcgaaaagattataactatgtt
attggaactcctcttgatgttgattttattgaggtatcttcaaaacaaattgtttcccta
gcagctacagctattcctttcttggaaaacgatgatgctaaccgtgcacttatggggtca
aatatgcaacgtcaagcagtaccactattagaagcggaagctccttatgttgctactgga
attgaagcagatattgccaagtattcttcgtataatttaactgcaaaaaatgctggtgaa
gtagttcttgttgatggttcaagaattcacgttaaacaagaagggggagttactgataga
tacttccttagaaactttgaacgttcaaatcaaggtactattattcaacaaaaaccaatt
gttgaagttggacaaatggtgcaaaaaggcgacttgcttgttgatggttcgagttttaaa
gatggagaaatggctcttggtaaaaatgttttagttggttttaccacttgaaatggatat
aactttgaggatgctattattatcagtgagcgtttagttaaagatgatgtttatacatca
attcacattgaagaacaaactatccaatttagatcttcacgtgctggagaagatcaatta
actcgtgatgatattccgaatgtttcaaaatactcaattagacatttagatgaacaagga
attgtacgtgtaggttcagaagttgtggctggagatgttttagttggaagaatttctcca
aaaggagaagataatccaactcaagaagaaaaactgttaatggctattttacaacaacgc
cctcaaaatgttaaagatacttcgcttaaagttaaaaacggacataatgggactgtaatt
cacgttgaagttctttctcgtgaaaaaggtgatgttcttgaagatggaattgacaaaatt
gttaaagtttcagttgctcaaaaacgtaaaattaaagttggagacaaaatggccggtcgt
cacgggaacaaaggggttatttcaatagtgcttcctgaagaagatatgccatatcttgaa
gatggaacaccacttgatattatgcttaaccctcaaggggttccttcacggatgaatatt
ggtcaagttcttgaacttcacttaggaatggctgctcgtaaattaggagttaaatttgtt
acaccttcatttgacggggttaaaaagaaagatattgaagatgctcttgttgaagcgggt
cttgataaaagtggaaaacaaactttaattgatccaattactggtcgtaagtttgataaa
ccaatttcagttggagttatgtacatgcttaaacttaaccacatggttgatgataaaatg
catgctcgtagtgtagggccttattcacttattacccaacaacctcttggtggaaaaagt
caaaacgggggacaaagatttggtgaaatggaaacttgagctattgaatcttatggagct
acaaatgttcttcaagagattttaacttataaatcagatgatatttctgggagaaatgcc
ctttatagtgctttagtttcggatactaaagaaattccaagtcctggaattcctgaatca
tttaacgtgttaagtaatgaacttaaaggattagggatgaaattagaattatcacaacaa
gatagtaatgaagaagagaaaataaatcaatacttagaagttgcaggagaaagttatgag
taa
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