Melitaea cinxia (Glanville fritillary): 123654001
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Entry
123654001 CDS
T09237
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcix03400
]
123654001
DNA repair and recombination proteins [BR:
mcix03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123654001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
123654001
NCBI-ProteinID:
XP_045445919
LinkDB
All DBs
Position
5:7302990..7314698
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AA seq
1944 aa
AA seq
DB search
MEGLTQNEKIVWNCWEQKSPREVVREAAAKGTHINLAIKYLKLKNSWSESIARDWFMAEV
KAWTVQLLMRKQIFKVLHILNKCNINPEEHLMALAQTSAEMEYRDFIVEHLHKLSKDMIS
TNLNKWEDFRRHWNLLRYLEKSFEVDGTFKQNKVFGIGSDRVFVNETEIKALTIEKIEKY
STEWKCKIATALFFDTFEFSLLDFSTPVQMWNYLVEHNKAMILVRWINVQMSEVVRDMNA
RYNFFNNDNFVQKLLNVDTRGFQSEVLDTLDEVFRKWPITKEMIQKISVSDCFEYTKMCI
YDTLSSYGIIIESERKDLNKIIGRLSRTQNLKLIDDIFSESCATMGIQEFYLELAKYFVK
NKLYKVLTICIEGNILDTDLSGIEQDVKDCIELWLLFKSIEQTSDRQSHVVPVYKTCQQI
AKDNIDDYISSNPHLVLGMILLEDNAKLFDIFTKEEFLQFKDFKLPNKGYKQKLPHLYNV
YKKHASENSLYECKDVNVYQLLSGYRGLDVSKIFEFQILNTSTSYLPPEKTDRRSLGSLL
SDEVEVRGLKTLSQKSVDMPDFANEKLMKRYGYDAKLNHLYYLKQYRPCNASQAFVSQQY
QSYNRLQEKSIKNACCEAHALALHNWFDPAMTACAISFVAMIGCNPTRCRVHISATKMIK
NHLTTQKGLPENEANKLINDFMAKLIQNNDDTAITILHYLEEITLYRLKKIQEAEGKFDM
SVVLYESQTMVKFALLHNLPLPEVQLREFVKNNSWFHFLLFGDVFRYPLSQMLQLSQEFE
KKSYSEHLKYIMVHRTAEDDKEQKSNSSNGQRRPMRLNSTEPSPTQNVTFDFPPSTYTSR
ELWEVAAACHGPEDPPAALLRAADIYREPLLVLIASCYEPNAVDVLWAHWILSSLEPNAR
SREALQAEIAQNVPAQLFQKVAEICLAEGYITTLYESISIFMPESPLNFLTSFLYRSVRL
LVFDSETMRYLTNFVSHCQRRYSVDANGLSYEMSKESLQRLAVSLVKIALIHNFDMAFHQ
KEFLKCLAETRFAQDFMVPTPNFATLYKIFEISMSTSTVMDISKMLQEDSNDYILERIVI
YTRNKNYDVALKIAKLAGLPVDDILKAEWDKKCNNLIFADDSTVEDKQITYFVAQCSEAF
KNAGVSLDKSIEFLSSIPKHISENDQKFYAYRVIMGWFEGNHVYGEKREQIEHEMWSAYL
SIDSKLNIVLNDYQATLKFVLNNQKEPTASQKMDMMFEEKPFSLTLHEIEVESDVINIEK
VEILEESDDIDRWQNAISKLLELKLLVEAFRLSVLFKTSNEYGYRTPVCPVQIMRTCLKL
AEGTCLPYDLPQELRLVISSPTLQNKLTVSEASETSFEELVVIQERQEGESIPHLAAREE
ADRLSALEALAVRSGLSVAKQVANYFRIALQIGWDYLSVLKYQSRPLDFINLVSGRARMS
LANLVFRTFNVPSKQIAEYLCREMVAAIISPHLVKTSTFRQKEHFQYTLWGYVLDSDIEM
FLNMRPDACSQIGRFILDHLMAFQKIYNATNASKIPENILDDSCLDVETLIDEEYQNVEE
DEVESILTEEGTLMSAETESVYSVSTAYTAGKMSRDARRNLFDVISRSNVHIRYEVKSNI
RKITKGAKLSTKQVNIISIELLVVAHECFSCACDTEGVGVALRSAQALAARLLAARSWRL
MVRLLTGLARYTECAYILQALRDNHQFEFLLGQFDYMLGQQQDKIAEFKYGLLDFLKTHC
PGDTDTYIMVALHFNMYAEAANVKKKQALDLIHDLEKMASDATKTSKKIAQPVWHLIHDN
VSTRSLLDTALNHCTDACELYLQGGCTGFAGEMATLAQQIALQISLLNASPTRLILNRST
EQTYNLVSEYLSFMEGLVFLSTGGASIWRELAYRRVLTNDQVYIRDMAMYRPDIAHDYLN
RYKSEKKKTPTSQAAISELRSLLR
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcttaactcaaaatgaaaagattgtttggaattgctgggagcagaaatcaccc
agagaggtagttcgcgaagcagcagctaagggaactcatattaacctagctataaaatat
ctaaaactcaaaaactcttggagtgagtcaatagcgagagactggtttatggcagaggtt
aaagcatggacagttcagctattgatgaggaaacaaatatttaaagttttgcatattttg
aataaatgcaacataaacccagaagagcatttgatggctcttgcccagacatcagccgaa
atggaatacagagatttcattgtggaacatctacataaactttcgaaggacatgataagt
acaaatctaaataaatgggaggactttaggagacattggaacttgctacgatatttagaa
aaatcatttgaagtagatggtacatttaagcagaacaaagtttttggcataggatcagat
agagtatttgttaatgaaactgaaattaaggctttgacaattgagaagatagagaaatat
tcaacagaatggaaatgcaaaattgcaactgctctattctttgatacttttgaattttct
ttattagatttttcaactcctgttcaaatgtggaactatttggtggaacataataaagct
atgatccttgttcgttggataaatgtccagatgtcagaagtggtccgtgatatgaatgct
agatacaatttctttaacaatgacaattttgtacaaaaactcttaaatgttgatactaga
ggctttcaaagtgaagttcttgatactttggatgaagtttttcgtaaatggcccattact
aaggaaatgattcaaaagatatctgtaagtgattgctttgaatacacaaaaatgtgtatt
tatgatactctgtcatcatatggaataatcatagaaagtgagcgtaaagatttaaataaa
ataattggtagattatcgagaactcaaaatctaaaactaattgatgatatattttctgaa
tcttgtgccacaatgggtatacaagaattttatttggaattggcaaagtattttgtgaaa
aataaattatacaaagtgctgacaatttgtattgaaggtaatatactggacactgatttg
tcgggcatagaacaagatgtcaaagattgtattgagctgtggttgctatttaaaagcata
gagcaaacttctgatagacaaagccatgtagtgccagtatataaaacttgccaacaaata
gccaaagataatattgatgattatatttctagtaatcctcatttggtgttgggtatgatt
ttattagaagacaatgcaaaattatttgatatatttactaaagaagaatttttacaattt
aaagattttaaattaccaaataaaggttataagcaaaaactaccacatttgtacaatgtc
tacaaaaaacatgcaagtgaaaacagtttgtatgaatgtaaagacgtgaacgtctatcaa
ctgctttctggctatcgaggtttagacgtgtcaaaaatatttgaatttcaaatattaaat
acaagcactagttatttaccacccgaaaaaaccgatcgaagaagtttaggcagtctttta
tcagatgaggttgaagtccgtggtctgaaaacattgtcacaaaaatcagttgatatgcca
gactttgctaatgaaaaacttatgaaaagatatggttatgatgcaaaattgaaccattta
tattatttgaaacaatatcgtccttgcaatgcgagccaagctttcgtttcacagcaatac
cagtcatacaaccgcttacaagagaagagcattaaaaatgcgtgctgtgaagcacatgct
ttagctttacataattggtttgatcctgctatgacagcatgcgcaatatccttcgttgca
atgatcggttgtaaccctacgagatgccgagttcacatatcggctactaaaatgataaaa
aatcatttgactactcaaaaaggattgccagaaaatgaggctaataaattaattaatgat
tttatggcaaaacttatacaaaacaatgatgacacggctataacgattcttcactattta
gaggagattactttgtacagattgaaaaaaatacaagaggcagaaggaaaattcgatatg
tctgtagtattatatgaatctcaaaccatggttaaattcgcattactacataatttacct
ttgccagaagttcagctaagagaattcgtcaaaaataactcctggttccattttctactt
tttggagatgtctttagatatccgctctcgcaaatgctgcagttatctcaagaatttgag
aagaaatcgtattcagagcatttaaaatacataatggtgcatcgaacagcggaagatgac
aaggaacagaagtctaattccagcaatggtcaaagaagacctatgaggctcaattcaact
gaaccgagtccaacacaaaacgtaacattcgatttcccacctagcacgtatacgagccgg
gagttatgggaagtggcggcagcgtgtcacggtccggaggacccgccggccgctctgttg
cgagctgctgatatataccgtgaaccattgcttgtgctcattgctagttgttacgagcca
aatgccgtggatgttctttgggcgcattggattctctcctcgcttgaaccaaatgcgaga
agtcgggaagccttacaagccgaaatagctcaaaatgttccggcacagttgttccaaaaa
gtcgcagaaatctgtcttgcagaaggctatataactactctctatgaatcaatttcaata
tttatgccggaaagtcccttgaattttcttacgtcgtttctgtatcgaagtgtccgtctt
ctagtatttgattcggaaactatgagatatttgactaattttgtttctcattgccaaaga
cgatacagtgtagacgcgaatggcttatcctacgaaatgtcgaaagaatcgctgcaaaga
ttggcggtatcgctagtcaaaatagctttaatccacaattttgacatggcatttcatcaa
aaagaatttctgaaatgtttagccgaaactcgtttcgcacaggactttatggttccaaca
ccgaattttgctaccctgtacaaaatattcgaaatatcgatgtcaacttcgacagtaatg
gacatatcaaagatgttgcaagaagattcaaatgattatatccttgagcgcattgttata
tacacacgaaataaaaattacgacgtagcattaaaaatagcgaagttagctgggttgccc
gtagacgacatcttaaaagcagagtgggataagaagtgtaataatcttattttcgccgat
gatagtacagtagaagataaacagattacttatttcgtagcacaatgcagcgaagctttt
aaaaatgctggtgtatctttagataagtccatagaattcctttccagtattccaaaacac
atttcagagaacgatcaaaagttttacgcgtacagagttattatgggctggtttgaagga
aatcatgtatatggagaaaagagagaacaaatcgagcatgaaatgtggtcggcttattta
tcgatagactctaaattgaacatagtccttaacgactatcaggccactttgaaattcgtc
ctcaacaatcagaaagaaccgacggcgtcccaaaagatggacatgatgtttgaagaaaaa
cctttctcattgacattacatgagatagaagttgaatctgatgtcataaatattgagaaa
gttgaaatattggaggagtcggatgatattgatcgttggcaaaatgccatcagtaaactt
ttagaattgaaacttttggtagaggcctttcgcttatcggttctctttaaaacttctaat
gagtatggatataggactccggtatgccctgtacaaatcatgcggacgtgcttaaaacta
gctgaggggacttgtttgccgtatgatttacctcaggaattgcgattggttatttcatca
ccaactctacaaaataaactgactgtttcagaagcgtcagaaacaagtttcgaagagtta
gttgtaatacaagaacgtcaggaaggagaaagtatacctcacttagctgcgcgggaagaa
gcagatagattgtctgctttagaagcacttgctgttagaagtggtctttctgtagctaaa
caggtggcgaactacttccgcattgcgcttcagatcggttgggattatttatcggtgctg
aaataccaaagtcggcctttggatttcatcaacttggttagcggtagagctcgcatgtct
ttagcaaatctcgtattccgtacttttaacgtaccatcgaaacaaattgcagaatacttg
tgtcgagaaatggtagcagcaattatatcaccacatcttgttaaaacttctacatttaga
caaaaagagcattttcagtacactttatggggctacgttctcgactctgatattgaaatg
tttctgaacatgcgtccggacgcttgcagtcaaattggcagatttatactcgaccacttg
atggcctttcaaaagatttataatgcaacaaatgcttcgaaaattcctgaaaatatctta
gatgacagttgcctcgatgtcgaaactttgatcgacgaggaataccaaaacgtagaagaa
gacgaggtcgaatctattttaactgaagagggaacacttatgtcggccgaaacagaatcg
gtgtattcagtttccaccgcgtacaccgcagggaaaatgtctcgtgatgcaagaaggaac
ttattcgatgtcatatcgaggagcaatgtccatattagatatgaagtgaaatcgaatatt
cgaaagataaccaagggtgctaaattgtctacaaagcaggtcaacattatatccatcgag
ttattggtggttgcacacgaatgcttctcttgcgcgtgtgacacggaaggcgtgggcgtg
gcgttacgctccgctcaggcgttggcggcgcgactgctggccgcgcgctcgtggcgcctc
atggtgcgcctgctcaccggcctggcgcgctacaccgagtgcgcctacatactgcaggcc
ttacgtgacaaccaccaatttgaatttctactgggacagttcgactacatgttaggtcaa
caacaggacaaaatagctgagttcaaatatggcttactcgacttcttaaaaacgcactgt
ccaggtgataccgacacatacataatggtcgcgttacatttcaacatgtacgcagaagct
gcaaacgttaagaaaaaacaggcattggaccttatacacgatttagaaaaaatggcgtcg
gatgcgactaaaacatcaaagaaaattgctcaacctgtttggcatcttatccatgataac
gtttcaacgaggtctttactagatacggcactaaatcattgtactgatgcttgtgaactg
tatttacaagggggatgtactggttttgccggtgaaatggcgactcttgcgcaacaaatc
gcgttacaaatatccttactgaacgcttcaccgactaggctaatacttaacagaagcaca
gagcagacgtataatcttgtcagtgaatatttgagttttatggaaggtttggtgtttctg
tcaactggcggagcgtcgatatggcgcgagttggcttaccgaagagttcttaccaacgac
caagtatatatacgagatatggcaatgtaccgcccggacattgcacacgattaccttaac
agatataaatcagaaaagaaaaagactcctacatctcaagctgcgatttcagaacttcgc
tcgctactaagatga
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