Melitaea cinxia (Glanville fritillary): 123654087
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Entry
123654087 CDS
T09237
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123654087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123654087
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123654087
Spliceosome [BR:
mcix03041
]
Complex C
Other components
Step II factors
123654087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
GIPC1_GH2
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
PhoH
AAA_30
Motif
Other DBs
NCBI-GeneID:
123654087
NCBI-ProteinID:
XP_045446004
LinkDB
All DBs
Position
5:complement(16661832..16673721)
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AA seq
1259 aa
AA seq
DB search
MDEVAKLEHLSLVSKICTELDNHLGINDKDLAEFIIDLADKNPQFDGFKKALIENGAEFS
DSFMTNLLRIIQHMKPVASESEKIEEKDKKSSNPLASKFPGLAIPNDKPPVFSSDEDSED
EKKNKRVTAKEIFKDESKVKESSSKDAVQEAMAALEALAPSNSHDTNEDTKRNVNKRDHS
RDRKDSRVKRDSSRERKRRRSRSRDKRSRSRERRSRSRDRRSRSKGRRSRSRDRDRRRRS
RSKQRHRSRSRERHRRSRSRNRRSRSRSQSPGRESRSRYRESEYNRKPKKKSPEVAMSDD
PEPGKIYNGRVANIVPFGCFIQMEGLRKRWEGLVHISQLRAEGRVTNVSDVVSRGDKVKV
KVLSVTGQKLSLTMKDVCQETGKDLNPTSHAHLEVSMSSRNPDRPPPAATVLAGLQSGLD
PDEDSSRKRVTRISSPERWEIKQMISSGVVDKSELPDFDEETGLLPKDEDGEADIEIELV
EEEPPFLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMESMP
TGLNKNWIDPLPESDGRALAANMRGTGITPQDLPEWKKHVIGGKKSSFGKKTNLSLLEQR
QSLPIYKLKDELTKAISDNQILIVIGETGSGKTTQITQYVCEVGLAARARVACTQPRRVA
AMSVAKRVAEEFGCRLGQEVGYTIRFEDCTGPDTIIKYMTDGMLLRECLMDLDLKSYSVI
MLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTF
PVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGP
DVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQ
KVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQR
TNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSALDSEGLLTRLGRRMAE
FPLEPNLSKILIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDH
LTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNIVR
IQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYM
REVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtcgcgaaattagaacatctctctctagtatcaaaaatatgtacagaatta
gacaaccatttagggataaatgacaaagatttggcggaatttatcattgatctggctgac
aagaatcctcagtttgatggtttcaaaaaagcacttatcgaaaatggagccgagttttcc
gactcgtttatgacaaatttactccgtataatacagcacatgaaaccagttgctagtgaa
agtgaaaaaattgaggaaaaagataaaaaatctagtaatcccttggcatcgaaatttcct
ggtttagctattcctaatgacaagcctccagttttttcgtccgatgaagacagcgaagac
gaaaagaaaaataaaagagttactgcaaaggaaatatttaaagatgaatcaaaagtaaaa
gaatcttctagtaaagatgctgtgcaagaggcaatggctgcattagaagctttagctcct
tccaacagtcatgacacaaatgaagacaccaaaagaaatgtcaataaaagagatcatagt
agggatcgtaaggacagtcgtgttaaaagggatagctcaagagaaaggaaaagaagaagg
agtcgtagtagagacaaaagaagcagaagcagagaaagacgtagtagaagtagagataga
cgtagcagaagtaagggcagaagaagcagaagtcgagatagagatagacgaagaaggtca
agaagtaaacaacgtcatagatccagatctagagaaaggcataggagatcaagatccaga
aacagaagatctaggtctagatcacaatctcctggtagagaaagtagaagtaggtataga
gagagtgaatataatagaaaaccaaagaagaagagccccgaagttgcgatgagtgatgac
cctgagccagggaagatttacaatggcagagtggcaaatatagtgccgtttggatgtttc
atacaaatggaagggttacgcaagaggtgggagggactcgttcacatatctcagctgagg
gctgaagggagggtcactaatgtttctgatgtagtctctcgaggagataaagttaaggtt
aaagtgttgtctgtgactggacaaaagttatcactgactatgaaagatgtttgtcaagaa
acaggaaaggacttgaacccaacatctcatgcacatttagaggtaagtatgtcaagtcgt
aaccctgaccgtccgccaccagcagccaccgtactggctggtctacagagtggtctcgat
cctgatgaagattccagtcggaaacgagtcactagaatctctagtcctgagcgatgggaa
attaaacagatgatatcatcaggagtcgttgataaaagtgagctaccagacttcgacgag
gagacaggtctactgccaaaagacgaagacggtgaggctgatatagaaatagaacttgtt
gaagaggaacctcccttcctccaaggtcacggccgagcgttacacgacctatctcccgtt
aggatagtaaagaatccagacggatcgctagcacaggccgccatgatgcaatcggcgctg
gcgaaagagagaagagaacagaagatgttacaaagagagcaggaaatggagagcatgcca
actggcttaaacaaaaactggatagacccattacccgagtccgacggccgggctttggcc
gcaaatatgaggggcaccggtatcaccccccaggatttaccagagtggaagaaacacgta
atcggggggaagaaatcttcgttcggtaaaaagactaatctgtctctcctggagcaaagg
caatccttgcccatttacaagttaaaagatgagctgacgaaggcgatatcggacaaccag
atcctgatcgtgatcggcgagacggggtcgggcaagacgacgcagatcacgcagtacgtg
tgcgaggtggggctggcggcgcgcgcgagagtggcgtgcacgcagccgcgccgcgtggcc
gccatgtccgtggccaagcgcgtggccgaggagttcggctgccggctgggccaggaggtg
ggctacaccatccgcttcgaggactgcacggggcccgacaccatcataaaatacatgaca
gacggtatgttactacgagagtgtctgatggatctggatctcaagagctactctgttatt
atgttggacgaagctcacgagcgcaccatacacacggatgtgctgttcggtctcctgaag
caagccgttcagaaaagacctgaactgaagcttattgtcacctccgctactctagatgcc
gtgaaattctctcaatacttctttgaagcgccaattttcaccatacctggaagaacgttc
ccagttgaagtgctttacacaaaagaaccggagactgactatctggatgcatcgttgata
acagtcatgcaaatacatttgcgagaaccgcctggtgatatactcttgtttctgaccggt
caggaggagatcgatacggcgtgtgagatattatacgagagaatgaaatctttaggaccg
gatgtaccggaacttatcatcctgcccgtgtattcggccttgccgtcggaaatgcaaaca
agaatcttcgaaccagcaccgcctggctctagaaaggtggtcatagctaccaacattgct
gagacctccttgacgatagatggtatatactacgtcgtcgatcctggcttcgttaaacag
aaagtgtacaattctaagaccggtatggactcgttagtcgtcacaccaatatcccaggcg
gcggcgaagcagcgcgcgggccgcgccgggcgcacgggccccggcaagtgctaccgcctg
tacacggagcgcgcctaccgcgacgagatgctgcccacgcccgtgcccgagatccagcgc
accaacctcgccaccaccgtgctacagctgaagacgatgggtattaacgacctgctgcac
tttgacttcatggacgcgccccctgtggagtccctaattatggcgctggagcaattgcac
tctctctctgctctagactccgaaggcctactaactaggcttggccgacggatggctgaa
tttccattggaaccgaacctctcaaaaatcctcatcatgtcagtagcgctacaatgttcc
gatgaaatattgactattgtgtcaatgttgagtgttcaaaacgtgttctaccgaccaaaa
gacaagcaagctctagcagaccagaagaaagcgaagttcaatcaaccagaaggagaccat
cttacattgctagccgtttacaacagttggaaaaataataagttctctaatgcttggtgc
tatgagaactttgtgcaaattaggacattgaaacgggctcaggatgtaaggaaacaattg
cttggaattatggacaggcataaattagacgtcgtatcagccggcaagaacattgtaagg
attcagaaaacaatttgctctggattctttaggaacgctgcgaaaaaagatccacaggaa
ggttacagaaccctagtagacagtcaagttgtttacattcatccctcaagcgcacttttc
aatagacaaccagagtgggtgatttaccatgagttggtacaaacaacaaaagagtatatg
cgtgaagtgaccacgattgaccccaaatggcttgtagagttcgcaccggccttcttcaag
ttctctgaccccacgaaactttctaagttcaagaagaaccagcgattggaaccactatac
aataagtatgaagagcccaacgcgtggagaatatcaagagtccgtcgacgaagaaattaa
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