Melitaea cinxia (Glanville fritillary): 123655145
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Entry
123655145 CDS
T09237
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcix04121
]
123655145
Ubiquitin system [BR:
mcix04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
123655145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
123655145
NCBI-ProteinID:
XP_045446938
LinkDB
All DBs
Position
7:8418632..8451414
Genome browser
AA seq
1679 aa
AA seq
DB search
FAEILQRIRSSNFVINSDKVAGASNSNGKGGRAAAPVDVGSPLLDWEEGDHFSFEDSERF
EEDSLCSWSSEPESLCNNWRGWRRPNPQSTFGIRITKKTIQEKTVSSLSELAAKCVASHI
PFELVEHVYPPVPEQLQLQIAFWSFPDSEDDIRLYSCLANGSADEFQRGEHLFRDRAVKD
VLQIGFHLSATVTLSMTRAQYNVAVTFDRQKISSCNCTCSSSAHWCSHIVAVCLYRIHLP
TQVCLRAPVSESLQRLRRDQLQKFAQYLISELPRQVLPTAQRILDELLSAQPNQINTTCG
APDPTAGASAYEYTSWFLDEKTLHNNINKILVKFCVPAPIVFSDVNYLSTSAPPAAAEWS
SLLRPLRGREPEGMWNLLSIVREMFKRSDRNAIPLLEIITEEVMACEQIIVWWYGTKAAL
VAWGGGGKHGAAGNSAAQHACSSLCDEVVVLWRLAALNPGLAPHERDTLHEQFAQWHTKV
LEKVAKNRSNHINTSSHPRHSRAHSHPPYINGISENEVFPGFQPAIEACFLEWDDYQVPG
VTYTKDLNPLYHSPFTIFRHTDKSDSVHQVNSSKAVLNNEMSLSYRLTNPDPSHISHRKL
LHRNNRVTIDIAIPGPSSQPCGSGEGRSDALVRDSGPSDGNHSSVSSEGFCENEEEILQQ
SGGDTDSQESSSAGASSDEVRRVSHDDSVSDDDCNLYYYDASAARRVAVDSGSNQNLHAS
GSGSGGRGGSSSFANWGCGWEVSFARAEGLHAHGHAREACALGARLAAELLASPPALVIE
IAAAEARRARRRHAPSPRLCAASHRLSCLASATLAKCAFLCTVLAEFSEHHELAFRVGLY
ALEMARPPASTKALEVKLNNQETELVALLKKLPTGVEQLVLAREKAEQLRDGTLRNRGPA
LLPIALASFLFDVLVLSATDKENKHPARLPSDEMLGFEAAVAALGLKANVSEADHPLLCE
GTRRQRGELAITLLSFYKDDPVKLARIMNKLLDREIHQLTKSPMVSMYYTNNPRLAAYRS
DVALYNHQAHPVHAQHSTPVIQQSAPACPLVADMERLAVAEGGPSPPAPHAPHVSHQTHA
SHAPHASHQTHAPHASHQTHAPPHQALPRLKDSRYKGKRLYPSVPNQPSEASAHFMFELA
KSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHMAAFQLGLYALGLHNCVSANWLSRTYS
SHVSWITGQAMDIGAPAILFLIDAWEGHLTPPEAAGIADKASSGCDVHMVRAAAELALSV
LPHAHALNYNEIQRAVLQCKEQSDAMLERACLTVEAAAKGGGVYPEVLYTVARYWHELYL
RQASEEDTLDEPAYRAPPPLAVPLPYPLAYPFAYHPYPPPIYQLQVTHPPQFGGAAAAHP
GAQYALQPYFVRGIVAPPHAHPPHHPQHAQHAPLPQHVQHSHAQAIAVSENVVFQQHPAP
IPPSMPAGHAMPAPGVTVGSVGAVGTVTTVSGVSAVSGVSATVGASGVGPPALPPAQLRR
LLAAYRVGMLALETQARRVHDDRPQNKFGRNPPYGEHVKWLLRISKRLGAQYLHQFCVCA
VNSVVSPFVLYELCVESAHWLARGGPHHLVMQHLRGTLAPLVHKCQQMYIQCIHQKLYHL
TSVEYEEFVGIVLSARTAFQLTPEGNTQFKEWLSTLRRSKSCKKDLWTQLNVALQTNGK
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
ttcgctgaaattctccagcgaattcgttcttctaattttgtaattaacagcgataaagtg
gcgggggcatcgaatagcaatgggaaagggggacgagcagccgccccagttgacgtggga
tctcctttactcgactgggaggaaggagatcatttcagttttgaagactctgagcggttc
gaagaagattctctgtgtagttggagttcagaacctgagagtctgtgcaacaattggcga
ggatggagacgacccaatcctcaaagtactttcggtattcgaatcacaaaaaaaactatt
caagaaaaaactgtatcaagcttaagtgaattagcagcaaagtgtgttgcatctcacatc
ccctttgaactagttgaacatgtctatccacctgtgcctgaacaactgcaactgcaaatt
gctttctggagtttccctgatagtgaggatgatatacgcttatattcatgtcttgcaaat
ggatcagcagatgaatttcagagaggtgaacatttattcagggatagagctgttaaagat
gtcttacaaattggtttccatttgtcagcgactgttacactcagtatgactagagctcaa
tacaatgtagcagttacatttgacagacaaaagatatcttcttgcaattgcacttgctca
tcgtcagctcattggtgttctcatattgttgctgtatgcctttacagaatacatttgcca
acacaagtttgtctacgagcacccgtatcagagtcgctacagagattgcgaagagatcag
cttcagaaatttgcacaatacctcatatcggagttaccacgtcaagttttacctactgct
caaaggattttagatgagttgctttcggcacaacctaatcagattaatactacatgcggg
gcgccagatcctactgctggtgcatctgcctatgaatatacatcttggttccttgatgaa
aagacattacataataatatcaacaaaatattagtcaagttttgcgttccagcgccaatt
gtatttagcgatgtgaattatctaagtacgagtgcccctccagccgccgcagaatggtca
tcactactgcgaccactccgtggaagagagcctgaaggaatgtggaatttgctgtctatt
gtgcgtgaaatgtttaaacgaagcgaccggaatgctataccactgcttgaaattattact
gaagaagtgatggcttgcgagcagataatagtgtggtggtacggcacgaaggcggcgctg
gtggcgtggggcggcggcggcaagcacggcgctgcgggcaactccgccgcgcagcacgcc
tgctcctcgctctgcgatgaggtggtagtattgtggcgtttggcggcattaaatccgggt
ctggccccacatgaacgtgacacattacacgaacaatttgcccaatggcacaccaaagtg
cttgaaaaggtggcgaagaaccgcagcaaccacatcaacacgtcatcgcacccgcgccat
tctcgagcccactcgcatcctccctatatcaacggcatcagcgagaacgaggttttcccc
ggcttccaacccgctatagaagcttgcttccttgaatgggacgactaccaagtacccgga
gtcacgtatactaaggacctcaacccgctctaccatagtcctttcactatattccgtcac
acagataagagtgacagcgttcatcaggtcaactcctcaaaagctgtgttaaataatgag
atgtctctgagttatcgtttaacaaatccagatccgtcgcatataagtcatcgcaaattg
cttcatagaaacaaccgtgtgaccattgatatagctatccctggaccatccagtcagcct
tgtggatctggcgaggggcgtagtgatgcattggtacgcgattctggtccaagtgatggt
aatcattccagtgtatcatctgaaggtttctgtgaaaacgaagaggagatcctgcagcag
agcggaggcgacacggactcgcaggagtcgagctcggcgggcgcgtcctcggacgaagtg
cggcgcgtctctcacgacgactcggtgtctgacgatgactgcaacctctactactacgac
gcgagcgccgcccggcgcgtcgctgtcgacagtggctccaaccagaacctacatgcgagt
ggcagcggcagtggaggtcgcggcggttcaagctcgttcgctaactggggctgtggttgg
gaggtgtcgttcgctcgcgcggaggggctccacgcgcacgggcacgctcgcgaggcgtgc
gcactcggggctcgcctcgccgccgaactgctcgctagcccgcctgcgctcgttattgaa
atcgcggcggcggaggcgcggcgcgcgcggcgccgccacgcgccgtcgccgcgcctgtgc
gccgccagccaccgcctgtcctgcctcgcctccgccacgctcgccaagtgcgccttcctc
tgcacagtgctagcagaattcagcgaacatcatgaactggctttccgagttggactttac
gccttagaaatggcgcgacctcctgccagtactaaagctcttgaagtgaagcttaataac
caggaaacggaacttgttgctttactgaaaaagcttcctactggtgtagaacagttagtt
ctagccagagaaaaggctgaacagttgcgtgatggcactttaagaaatcgtggcccagcc
ttgctacctatagcattagcaagcttcttgtttgatgtacttgttttatcagctactgat
aaggaaaataaacatcctgcaagattgccatcagatgaaatgttaggttttgaagctgct
gtagcagctttaggactaaaggcgaatgtttccgaagcggaccacccattactttgtgag
ggaacacgaagacaacgtggggaattggcaattactttgttatcattctacaaggatgat
ccagtgaaattagctcgaattatgaacaagctattggaccgtgaaattcatcaactaaca
aaaagcccgatggttagcatgtactacacgaacaatccgcgtcttgctgcatatcggtct
gacgtcgctctatacaatcatcaagcccatccagtccatgcgcagcattctacaccagtt
atacaacaatctgccccagcgtgtccactagtagcggatatggagcggctggcggtggcg
gagggcggcccgtccccgcccgcgccgcacgcgccgcacgtgtcgcaccagacacacgca
tcgcacgcaccgcacgcgtcgcaccagacgcacgcaccgcacgcgtcgcatcagacgcac
gctcctccccaccaggcgctacccaggcttaaggactctagatataaaggcaagcgtttg
tatccgtctgtacccaatcaaccttcagaagcttcagcccacttcatgtttgagttggct
aaatctgtgcttttcaaggccggcggttcgtccagtacaagtcttttcacacaaacttca
tgtgcaagagaacatcacggtccacacagaggattacatatggctgctttccagttgggt
ctttatgccttagggcttcacaactgtgtcagcgcaaactggctcagtcgcacatactct
tcacatgtcagctggatcacaggccaagcaatggatattggagcacctgcaattttgttc
ctgatagatgcctgggagggtcatctcacacctccagaagccgccggtatagcagataag
gcgtcgtcgggctgcgacgtgcacatggtgcgcgcggcggccgagctggcgctgtcggtg
ctgccgcacgcgcacgcgctcaactacaacgagatccagcgcgccgtgctgcagtgcaag
gagcagagcgacgccatgctggagcgcgcctgcctcaccgtcgaggcggccgccaaaggc
ggcggcgtatatccagaagtactgtatacggtggctcgctactggcatgagctgtacctg
cggcaggcgagtgaggaggacacactggacgagccggcgtaccgcgccccgccaccgctt
gccgtgccgctgccctacccgctggcctaccctttcgcgtaccatccctaccctccgccc
atctaccagctgcaagttactcacccgcctcagttcgggggcgcggcagcagcgcacccg
ggcgcgcagtacgccctgcagccgtacttcgtgcgcggcatcgtggcgccgccgcacgcg
cacccaccgcaccacccgcagcacgcgcagcacgcgccgctgccgcagcacgtgcagcac
tcgcacgcgcaggccatagccgtcagtgaaaatgttgtattccagcaacacccagctccc
attcctccgtcgatgccagcgggtcacgcgatgcccgcgccgggcgtcacagtgggtagt
gtgggcgcagtgggaacggtgacaaccgtcagtggagtgagcgcggtcagcggagtcagt
gcgaccgtgggggccagcggcgtggggccgcccgccctgccgccggcgcagctgcggagg
ctgctggccgcctaccgcgtgggcatgttggcgctggagactcaggcgaggcgcgtgcac
gatgaccgtcctcaaaataaattcggaagaaacccgccatacggcgagcacgtcaagtgg
ctgctgcgcatatcgaagcgtctgggcgcgcagtacctgcaccagttctgcgtgtgcgcg
gtgaactcggtggtgtcgcccttcgtgctgtacgagctgtgcgtggagtccgcccactgg
ctggcgcgaggcgggcctcaccacctggtcatgcagcacttgaggggcacactagcgcct
ctcgtgcacaagtgccagcagatgtacattcaatgcatacatcagaagttgtatcacttg
acgtcggtggaatacgaagagtttgtaggcatcgttctgtctgcacgcactgcctttcaa
ctcacacccgagggtaacacacagttcaaggaatggctctctactctacgcagatccaag
tcgtgcaagaaggacctgtggacgcagctgaacgtggcgctgcagacgaacggcaaatga
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