Melitaea cinxia (Glanville fritillary): 123655431
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Entry
123655431 CDS
T09237
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123655431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123655431
Spliceosome [BR:
mcix03041
]
Complex C
Other components
Step II factors
123655431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
PQQ_2
Beta-prop_DCAF12
PEP5_VPS11_N
NBCH_WD40
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
123655431
NCBI-ProteinID:
XP_045447200
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Position
7:15987903..16026668
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AA seq
625 aa
AA seq
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MTSSNVDSPVVFVICYSSVLILFCVSRPKYSNFIHILISSVNTFISVKMLNIKKYGSSSE
DESDNDEETSQIHSNEALLTHLKPVAPDLSLAKKMQICAAPAVVPTTNEDSRVLIHHNQE
LTHNPKFEELYAPSYGPENPFQTQQMKANRNILSGYVEKAHISEFQFENQRRTFTSYGYA
IDPSTEPIVDEKGESVVVSEMVAAPVEAEGKTVFENIKKRPLDKKKRNKNDNPEDVNGFL
GPWGGYEGERRVMKPEGDEAKELEEILAKRQKKGKVEDDKPLEEKSIFHIDQATDYQGRS
WVEAPRSETHLRSDTPPDKCFLPKAHVFTWRGHSKSVCASRWFPRTAHLMLSAGMDCRVK
IWEVYGERRCIRTYFGHRQAVRDINFNNSGQQFLSASYDRYIKLWDTETGECISRFTSRK
VPYCAKFNPDEDKQHLFVAGTSDKKIICWDIRSGEIVQEYDRHLGAVNTITFVDDNRRFV
TTSDDKSLRVWEWDIPVDMKYIADPSMHSLPAVAPAPNGKWLACQSMDNKIVVFSALNRF
KLNRRKTFAGHMVAGYACQPDFSPDMSYLVSGDADGKCYIWDWKTTKLYKKWKAHDGVCI
TAMWHPHEPSRLLTAGWDGLIKYWD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttccaatgtggattctccagtggtgtttgtgatttgttattcttctgtgtta
atattattttgtgttagtaggccaaaatattcaaactttatacacattttaatttcatct
gtaaatacgtttattagtgtaaaaatgttaaatataaaaaagtacggtagtagttcagaa
gatgaatcagacaatgatgaagaaacaagccaaatacatagtaacgaagcattgttgaca
catttaaaacctgttgcaccagatttatcattagctaaaaagatgcagatatgtgcagcc
cctgctgtagtccccacgacaaacgaagacagcagagtactgatacatcacaatcaagaa
ttgactcataatcctaaatttgaggaattatatgcaccatcctatggaccagaaaatcca
tttcaaactcaacaaatgaaagcgaataggaatatactctctggttacgtagaaaaagct
catataagtgaatttcagtttgaaaatcagagacgaacgtttactagttatggttatgcc
attgatccatctacagaacctatagtagatgaaaagggagagtccgttgttgtatcggag
atggtagctgcaccagttgaagcagagggtaaaacagttttcgagaacattaaaaagagg
cccttagataagaagaagagaaataaaaatgacaatccggaggatgtgaatggttttcta
ggaccatggggagggtatgagggtgaacgcagagttatgaaaccagagggtgatgaagca
aaggagcttgaagaaatccttgcaaagagacagaagaaaggcaaagttgaagatgataaa
cccttggaagaaaaatctatattccatattgaccaagccactgactaccagggtcgatcg
tgggtcgaagcccctcgaagtgagactcatttacgtagtgacacaccaccggataaatgt
ttcctgccgaaggcgcacgtgttcacgtggcgagggcacagtaagagcgtgtgcgcgtcg
cgctggttcccgcggacggcgcacctcatgctgtcggccggcatggactgcagggtcaag
atctgggaggtgtatggcgagcgtcgctgtatacgaacatacttcggacacaggcaggct
gtcagagatattaatttcaataattctggacaacagttcttatctgcttcctacgaccgc
tacatcaaactatgggataccgaaactggagagtgtatatcaaggttcacatctcggaaa
gtaccgtattgcgctaaatttaatccggacgaggacaaacagcacttgttcgttgctggt
acctctgacaagaagattatatgttgggatatccgcagcggagagatcgtacaagagtat
gacagacacttgggagcggtcaataccatcacattcgtcgacgacaacaggagattcgtc
accacatctgatgacaagagtttacgtgtgtgggagtgggacatccccgtggacatgaag
tacatcgcggacccgtccatgcactcgctgcccgcggtggcgccggcccccaacggcaag
tggctcgcgtgccagtccatggacaacaagatcgtggtgttcagcgccctcaaccggttc
aagctcaaccgccgcaagaccttcgccggccacatggtcgccgggtacgcctgccagccc
gacttctcgcccgacatgagctatctggtgtccggcgacgcggacggcaagtgttatatt
tgggactggaagacgacgaagctgtacaagaagtggaaggctcacgacggcgtgtgtatt
accgcgatgtggcacccccacgagcctagccgcctactcaccgccggctgggatggactt
atcaagtactgggattaa
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