Melitaea cinxia (Glanville fritillary): 123656178
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Entry
123656178 CDS
T09237
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123656178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcix02000
]
123656178
Transporters [BR:
mcix02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123656178
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123656178
NCBI-ProteinID:
XP_045447838
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Position
9:15805664..15823572
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AA seq
596 aa
AA seq
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MSPAPPDSPTAPAPAPTLPPQPSQPPPTTNSHKTRSIVVSLTPDRQRETWAKKAEFLLAV
VGFAVDLGNVWRFPYICYQNGGGAFLIPYCIMLLFGGLPLFFMELALGQYHRCGCLTLWK
RICPALKGVGYAICMIDIYMGMYYNTIIGWAVYYLVASLASINSVLPWTSCDNEWNTPLC
MPVTSPQINPNASTPAKEFFERNVLEQHKSHGLDDMGPIKPSLALCVFGVFVLVYFSLWK
GVRSAGKVVWVTALAPYVVLLILLARGVTLPGATEGIRYYLTPEWHKLQNSKVWIDAASQ
IFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAHVQNK
SIEEVGLEGPGLVFIVYPEAIATMTGSVFWAIIFFLMLITLGLDSTFGGLEAVTTALCDE
YPRVLGRHREMFVAVLLLFIYICALPTTTYGGVYLVDLLNVYGPGLAILFVVFAEAAGVC
WVYGVDKFSEDVRSMLGHTPGWFWRACWSYISPVFLLVLFVFSVLAHEEMLGGEYVFPRW
SIRVGWLMTGTTVACIPLYIVYKFLITPGNCVNRIKAITRPEVTSIPPADHALCSL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgcgccgccggactcgccgaccgcgcccgctcctgcgcccaccctgccgccg
caaccctcgcaacctccacccaccaccaacagccacaagacgcgatcaatcgtggtgtcc
ctgacgcccgatcgtcagcgagagacttgggcaaagaaagcggaatttcttcttgcggta
gtgggattcgctgtcgacctcggtaatgtgtggcgcttcccttatatctgctatcaaaac
ggcggaggtgcattcctcataccgtactgcataatgttgctgttcgggggcctaccgctc
ttctttatggagttggcgctaggacaataccatcgttgtgggtgcttgacgctgtggaag
agaatatgtccagctttaaagggagttggctacgcaatatgcatgatcgacatctacatg
ggtatgtactacaacactatcatcggctgggcggtgtactacctggtagcgtcgctggcg
tccataaactccgtactaccctggaccagttgtgacaatgaatggaacacacccctttgc
atgccggtcacgtctccgcagatcaaccctaacgcttctacacctgccaaagaattcttc
gagcggaacgttctggaacaacacaaatcacatggcttggacgacatgggccccatcaag
ccatctctcgctctctgcgtcttcggcgttttcgtgctggtgtacttctcgctgtggaag
ggtgttcgaagtgctggcaaggtggtgtgggtgacagcgttggcgccgtatgtagttctg
ttgattctgcttgcaagaggagtgaccctacctggtgctactgaaggaattcgatactat
ctaacaccggaatggcacaaactacagaactctaaggtatggattgacgcggcgtcccaa
atcttcttctccctgggcccaggcttcggcacactgttggctctgtccagctacaacaaa
ttcaacaacaattgctatcgcgacgcgctaatcacatcttcaatcaactgcctcactagc
tttctcgccggattcgtcatcttctccgttttaggatatatggcacatgttcaaaacaaa
agtatcgaggaggtaggtctggagggccctggtctggtattcatcgtgtacccggaggcc
atcgctactatgaccggttctgttttctgggctatcatattcttcctcatgctgataact
ctcggacttgatagcacgtttggtggcctagaagctgtgactactgctctatgtgacgag
tacccgcgggttcttggacgacatcgagaaatgtttgtagcggttctgttgctcttcatc
tacatctgtgccctaccgactaccacttacggcggcgtgtatttagtggatctgctgaac
gtgtatggtccggggctggcgattctgttcgtggtattcgcggaggcggcgggcgtgtgc
tgggtgtacggggttgacaagttctcagaagacgtgcgaagcatgctcggacacacgcct
ggttggttctggagagcctgctggtcttatatcagtcccgtgttcctgctcgtgctgttc
gtgttctccgtgctggcgcacgaggagatgctgggcggcgagtacgtgttcccgcgctgg
tccatccgcgtgggctggctcatgaccggcaccaccgtcgcctgcatcccgctctacatc
gtctacaagttcctcatcaccccgggcaattgtgtcaatcgaataaaggctatcacccgt
ccggaagtgacgtccataccaccggccgaccacgcgctatgcagtctgtga
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