Melitaea cinxia (Glanville fritillary): 123656225
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Entry
123656225 CDS
T09237
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123656225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123656225
Spliceosome [BR:
mcix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123656225
Complex C
U5 SnRNP specific factors
123656225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
123656225
NCBI-ProteinID:
XP_045447882
LinkDB
All DBs
Position
9:complement(4479033..4503499)
Genome browser
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAAAAAAPPVPPSQPPKPHHIPEEKIK
EKAQKWHQLQTKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIELDPEEDAAVASWFYDHK
PLLGTRHVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHTVKSLDPVPEEEDFLLPEDVSPFLQETAL
YTDNTANGIALLWAPRPFNMRSGRSRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPLWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLSYQDRAAEQAHPIRLYCRYIDRIHIFFRFTAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQNEELSHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTLTEPHHIWPTLSDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
PDNPQVREVHCAVLPPQWGTHQAVHLPRQLPKHPALAHLQPLGWMHTQPNELPQLSPQDI
TTHAKIMSENPSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGAKNTDRGNNPKGYLP
SHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDSTAPTLAADREDHFA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccctatctattggggcccaacccatgggccacgatgatggcccaacag
caattagcagcggcgcagcaggcagcattgcaagctcatgccgccgcggctgcggctgca
cctcctgtgcctccatcacaacctcctaaaccccatcacattcctgaggaaaagattaaa
gaaaaagctcaaaaatggcaccaacttcaaacaaagcgttttgccgaaaaaaggaaattc
ggatttgtagatgcacaaaaagaagacatgccaccagaacatatccgtaaaattatcagg
gaccacggtgacatgacaagtcgaaaataccgtcatgacaaacgagtttaccttggagct
ttgaaatatatgccacacgctgtcatgaaactgttagaaaacatgccaatgccctgggag
caaatccgagatgttaaagttctgtaccatataactggagctatcacatttgtaaatgaa
ataccatgggtcattgaaccagtatatatagcgcaatggggaacaatgtggattatgatg
cgtagagaaaaacgtgatcgtcgccatttcaaacgtatgaggttcccgcctttcgatgat
gaggaacccccgttggactatgctgataacattcttgacgtagaacctttagaacctata
caaattgaattagatcctgaagaagatgcagcagtggcttcttggttttatgaccacaaa
ccactgttaggtactagacatgtaaatgggtctacatacaggaaatggaatttgtcatta
ccacaaatggctactctataccgccttgctaatcaattgttgactgatttagttgatgat
aattatttctatctgtttgattctaaaagcttctttactgcaaaagctttaaatatggcc
atacccggtggaccaaaatttgagccacttgtaaaagataactcagctggtgatgaagat
tggaatgagtttaatgatataaataagatcattattcgccagccaatcagaacagaatac
agaattgcatttccatatctgtacaacaatttgccgcactttgttcaactttcttggtat
catacacccaatgtggtgtacataaaaacggaagatccagatttaccggctttttacttt
gatccattaatcaatccgatctcccatcgccacacagtgaagtccctagacccagtgcct
gaggaagaagatttcctattaccagaagatgtatcaccattccttcaagagactgcattg
tacaccgataatactgcaaatggcattgcacttttatgggctccaagaccattcaacatg
agatcagggcgtagtcgtcgcgctattgacgttccccttgtcaagacttggtacaaagaa
cactgtccgcccggtcaacctgtcaaagtacgagtctcttaccagaaattactcaagtac
tatgtactaaatgcacttaaacatagaccgccaaagccgcaaaagaaaaggtatcttttc
cgttccttcaaatcaacaaaattcttccaaacgacgacccttgactgggtggaagctggt
cttcaagtttgtagacagggctacaatatgctcaacttacttattcatcgaaaaaatctc
aactatctccatcttgactacaactttaatttgaaacctgtcaaaacactcaccactaag
gagagaaagaaatctcgtttcggaaacgcgttccacttgtgtcgtgaaattctcaggctt
actaaactgatagtggactctcacgtccagtatcgactcaataacgtcgattccttccaa
ttggctgatggtctgcaatacattttcgcacacgtcggtcaactgaccggcatgtacaga
tacaagtataagctgatgagacaaattcggatgtgcaaggacttgaaacatctcgtctat
tatagatttaatacaggtccagtatcaaaaggacctgggtgtgggttctgggcaccgggc
tggcgtgtttggctattctttatgcgtggtattacacctctactggagcgatggctcgga
aacttgctgtcgcggcaattcgaaggacgacactcaaaaggtgtcgcaaagacggtgact
aagcagcgcgtagaatcccacttcgacttggagctacgcgcgtctgtcatgcacgacatc
gtcgacatgatgcccgaaggtatcaaacaaaacaaggctagaacaatcttacaacacttg
tctgaagcctggaggtgctggaaagctaatattccctggaaggtaccaggacttccaaca
ccgatagagaacatgattctccgttacgtgaaaatgaaagctgactggtggaccaacact
gcccactacaaccgtgaacgtatccgtcgaggcgccaccgttgataagactgtttgtaag
aagaacttgggacgcctaaccaggctgtatctgaaagcagagcaagaaaggcaacataac
tatttgaaggatggaccctacatttcaccagaggaagctgtggcgatctacacaacaaca
gtccactggctcgaatctcgccgtttcgcgccgattccattccctccactttcatacaaa
cacgacacaaagttgcttatcctagctttggaacggttaaaagaggcctacagtgttaaa
tccaggcttaaccagagtcaaagagaagagttaggtcttatagaacaagcctatgataat
cctcacgaagctctgtcgagaatcaagcgtcacttgcttacacagaggactttcagagag
gtgggcatcgagttcatggacctgtactcgcacctggtgcccgtgtacgacgtggagccg
ctggagaagatcacggacgcctacctggaccagtacctgtggtacgaggcggacaagcgc
cgcctgctgccgctctgggtcaagccggccgacaccgagccctcgccgctgctcgtgtac
aagtggtgccagggtatcaacaacttgcaagacgtgtgggaggtcggtgaaggcgaatgt
aacgtactgctggagtctcgtttcgaaaaactttatgagaagatcgacttgacgctactc
aaccgtctcttgcgtctgatcgtggaccacaacattgctgactacatgactgctaaaaat
aacgtcgttattaattataaggacatgaaccacacaaactcctatggtataattcgtggg
ctccaatttgcatcattcatagtccaatactatggcctagtgctagatttacttgtactg
ggtctacaaagggccagtgagatggctggtccaccacaactgcccaatgacttcctctcc
taccaagatagagctgctgaacaggctcatcctatccgactgtactgcagatatattgat
cgcattcatatattcttcagattcacggcagaagaagctcgtgatctgatccagcggtat
ctcacagagcatcctgatcccaacaatgagaatattgttggctacaacaataagaagtgc
tggccccgagacgctagaatgcgcttgatgaaacatgatgttaacttaggtcgtgcagtg
ttctgggacattaagaaccgtcttccgcgatcggtgacaactatccagtgggagaacagt
ttcgtctctgtctactccaaggataatcctaaccttttgttcaacatggcaggctttgag
tgcagaatattgccaaagtgccgcagccagaacgaggagctgtcgcaccgcgacggcgtg
tggaacctgcagaacgaggtgacgaaggagcgcacggcgcagtgctacctgcgcgtcgac
gacgagtcgctcgcgcgcttccacaaccgcgtgcgccagatcctcatggcgtccggctcc
accaccttcaccaagatcgtcaacaagtggaacacggcgctcatcggcttaatgacatac
ttccgtgaggcggtcgtcaacactcaagaactgctagatctactcgtcaaatgcgaaaac
aaaattcagacccgaatcaaaatcggtctgaactctaaaatgccttcacgtttcccgcca
gttgtgttctacacgccgaaagagttgggtggtcttggaatgttgtctatgggacatgtt
ttgataccacagtctgatctccgttggtctaaacaaacagacgtgggtatcactcacttc
agatcaggaatgtcacatgacgaagatcaacttattcccaacttgtatcgctacatccaa
ccctgggaggcagaatttgttgactcacagagagtgtgggctgagtatgctttgaagaga
caagaagctaatgctcagaacagacgattaacactggaagatttagaagactcgtgggac
agaggtataccaaggatcaatacattgttccaaaaagatcgacacactcttgcctacgat
aaaggatggcgtataagaactgaattcaaacaatatcaggttctaaaacaaaatcctttc
tggtggacgcatcagcgtcacgatggtaaactatggaacttaaataactaccgtacagac
atgatccaagcgctcggtggcgttgaaggcatacttgaacatacactcttcaaggggacg
tacttccccacgtgggagggtttgttctgggaaaaagcgtcaggtttcgaagaatcaatg
aaatacaagaaattgacaaatgcacagcgttctggtttgaaccagattcctaatcgtcgt
ttcactctctggtggtcgccgaccataaacagagctaatgtgtacgtcggtttccaagta
caactggatttaacgggtatattcatgcacggtaaaattcccacattgaaaatctccctt
atccaaatctttagagctcacttgtggcagaaagtccacgaatctattgttatggacttg
tgtcaggtattcgatcaagaactcgacgctttggagatagaaacagttcaaaaagaaacc
attcaccctcgtaagtcatacaaaatgaactcatcttgcgccgacatactccttttctcg
gcttacaagtggaatgtgtcacgtccgtctttgcttgctgatacaaaagacacaatggac
aacacaacaactcagaaatactggttggacatacaactccgatggggagactacgattct
catgatgtagagcgatatgctcgagcgaaattcttagactatactactgataacatgtcc
atatatccatcgcccactggtctgcttattgctatcgacctggcctacaacttgcacagt
gcatatggcaactggttcccgggatgcaagccactcattcaacaagcaatggcaaaaata
atgaaggctaatcctgctttatatgtacttcgagagcgtatacgtaaagcactacagctg
tactcctccgagcctaccgagccatacctctccagtcagaactatggtgaactgttctcc
aatcaaattatttggttcgtcgacgacacaaacgtataccgtgtaacgattcacaagacg
tttgaaggcaacttgactacaaaacccatcaacggagcaatcttcatcttcaacccacgc
actggacaactgttccttaagatcattcacaccagtgtatgggctggtcagaaacgttta
ggacagctcgcaaaatggaaaaccgccgaagaagttgcggctttgattcgttcattgccg
gttgaagagcaacctaaacaaatcattgtcacaagaaaaggaatgttggatcctcttgag
gttcacttgctcgactttccgaacattgtgatcaagggctccgagctgcaactgcccttc
caagcttgccttaaagtagagaagtttggagatctcattttaaaggcgacagaaccgcag
atggtactattcaacttgtacgatgactggctcaagactatatcatcatacacagcattc
agcagactgatcctaatattgcgtgcgttgcacgtgaatacggaaaggacgaaggtttta
ctaaaaccagacaagacaacattaacggaacctcatcatatctggcctactttgtctgat
gatgattggatcaaggttgaggttcaactgaaagatctcattctggccgattatggcaag
aagaacaatgtgaatgtagcgtcactaactcaatctgagattcgagacattatcttgggt
atggagatatcggcaccttcagcccaaaggcaacaaatagctgaaattgagaagcaaagc
aaggagcagagtcaactcacagcaaccaccactcgaactgtaaacaaacacggtgatgag
attattacttcaacaaccagtaactacgagtcacagacctttagttcaaagacggaatgg
agagtacgtgcgatatccgcaacgaacctccacttgcgtacgaaccacatttacgtgagc
tctgacgacatcaaagaaagtggttacacatacatcttaccgaaaaacttgctcaagaag
ttcgtcacaatatcggatttgagagcacagatcgcgtgctacctctatggcacgtcgcct
ccagacaacccacaagtccgagaggtccactgcgccgtactacccccacagtgggggaca
catcaagcggtacatttaccgcgacagctacccaaacacccggctcttgcccatctacag
ccattaggctggatgcacacacaacctaatgaattgccgcaactatctcctcaggacata
acaacacatgctaaaattatgtccgagaatccttcatgggatggtgaaaaaactataata
attacatgttcattcactcctgggtcttgttctctgactgcttacaaactaacacctagt
ggctatgaatggggcgctaagaacacggacaggggtaacaaccctaagggctatttgcct
agtcattatgaaagggtccagatgctgctctcggatcgttttcttgggtacttcatggtt
ccatcgcagggcagttggaattataatttcatgggtgtccgtcacgatccaaatatgaaa
tatggtgtccaacttggaaatccccgtgaattctatcatgaagtgcatcggcctgctcat
ttcatgaactttgcagcaatggaggactcaaccgctcccacacttgccgcagatagggaa
gatcacttcgcttag
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integrated database retrieval system
