Melitaea cinxia (Glanville fritillary): 123656549
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Entry
123656549 CDS
T09237
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123656549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123656549
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123656549
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123656549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
123656549
NCBI-ProteinID:
XP_045448174
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All DBs
Position
9:2488867..2519693
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AA seq
690 aa
AA seq
DB search
MAASRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLISSIDALNLQIDLFESEVESLLVGKKKRLDKEKQDRMEELKFKLERHRFHIK
KLETLLRMLDNMSVEVEQIKRIKDDVEYYIVSSLEPGFEENDYIYEDINGLDEIELSGVG
LPSSATTDSNNSNDSPGSPTSILSGTSPITSPSLDVNHTMDSTDVEKKKKEDLAKPVKPL
PLRVSCVSSSPANVSLLNNSATNRLVRGLLYYKNENQNGLYLYINNTGASGASTPSKQPA
PPSPHLTRPSEVVENGPVSGPALPAALPAHAVLAAHAPKAEEQVSHLMTSKSASSTTPAS
SASAATSTVASVVTSALASGATSPLTVNVSVNGPSHARALSPPLIVNNGRVSETPSTPAL
SSGAGAVGSTGTASLKSMAQEAVQRAGLDHHSQSGVSLSRRGLALSQAHIPPLLGVAPLG
PLPLNNDHQVQFQMMEAAFYHMPHPSDSERTRVYLPRNICQTPVYYNQVLLPHSDSVEFF
QRLSTETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGT
YIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcaagaaaattacaaggtgagatagacaggtgtttaaaaaaggtcacagag
ggggtggaaacgtttgaagatatctggcagaaagtacacaatgcgacgaacagtaatcag
aaggagaaatatgaggcagatctcaagaaggagattaaaaaactccagaggctacgagat
caaatcaagtcatggatcgcttcgggcgagattaaggataagagtacacttttagaatat
aggaaactaattgaaacgcaaatggaaaggtttaaagtagttgaacgagaaacaaaaacc
aaggcatactctaaggaaggactgggagctgcacagaagttagaccccgctcagaaggag
cgagaggaaatgtcttcgtggctcatatcctcaattgacgcacttaatttacagattgat
ctttttgagtctgaagtggaatcactattagttggtaagaagaaacggttggacaaggag
aagcaggatcgtatggaagagctcaaatttaaactagagaggcataggttccatataaaa
aaacttgaaactcttctacgaatgctagataacatgtctgtagaagttgaacagataaag
agaataaaagacgacgtagagtactatatagtatcatcgctagagccagggtttgaggaa
aatgactatatctatgaagatattaacggtttagacgagattgaactaagtggagtaggt
ttgccatcatcagcgaccacggatagtaataacagtaatgattcacccggatcacctacc
agcatactttcaggaacaagtccaatcacatctccgtcattagacgtcaaccacacgatg
gattcaacggacgtagagaaaaagaaaaaagaggatttggcaaaaccggtcaaacctctg
ccgctgagggtgtcgtgcgtcagtagtagtccggctaacgttagcttgctcaataactcc
gcaaccaataggttagtccgaggacttttatattacaaaaatgagaaccagaatggcctg
tatctatatataaacaatacgggcgcgtcaggagcttcgacgcccagcaaacaaccagcg
ccgccttcgccacacctcacgcgccccagcgaagtagtggagaatgggccggtgtcgggc
ccggcgctgccggcagcgctgccagcgcacgccgtgctcgccgcgcacgcgcctaaagcg
gaggagcaagtcagccacctgatgacgtcaaagagcgcatcgtcgacgacgcccgcgtcg
agcgcgagcgcggcgacgtcgacggtggcgagcgtggtgacgagcgcgctcgcgtccggc
gcgacgtcgccgctcaccgtcaacgtcagcgtcaacgggccctcgcacgcgcgcgcgctc
tcgccgccgctcatcgtcaacaacgggcgagtgagcgagacgccgagcacgcccgcgctg
agctccggcgcgggcgcggtgggctccacgggcaccgcctcgctcaagagcatggcgcag
gaggccgtgcagcgcgccggcctcgaccaccactcgcagtctggtgtgagtttatcgcga
cgaggactagcactttcacaggcgcacatccctccgctactgggagtcgcgccgcttggg
cctctgccgcttaataatgaccaccaggtgcagtttcagatgatggaggcggcgttctac
cacatgccgcacccctcagactcggaacggacccgcgtctacctacctaggaacatctgc
cagacacccgtctactacaaccaggtgctgctaccacactcggactcggtggagttcttc
cagcggctgtcgacagagactctgttcttcgtgttctactacatggagggcacgaaggca
cagtacctggccgcgaaggctttaaaaaagcagagctggcgcttccacacgaagtacatg
atgtggttccagagacacgaggagcccaaagtcatcaacgaggagtatgaacagggcaca
tacatttacttcgattacgagaagtggggccagcggaagaaggagggcttcacgttcgag
tacaagtacttagaggaccgcgacctcaactga
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