Melitaea cinxia (Glanville fritillary): 123656595
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Entry
123656595 CDS
T09237
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03013
Nucleocytoplasmic transport
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123656595
09122 Translation
03013 Nucleocytoplasmic transport
123656595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123656595
03041 Spliceosome [BR:
mcix03041
]
123656595
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123656595
Spliceosome [BR:
mcix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123656595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
123656595
NCBI-ProteinID:
XP_045448221
LinkDB
All DBs
Position
9:6350162..6352815
Genome browser
AA seq
693 aa
AA seq
DB search
MGKDDLSNKKRRKLNTTTSTENTKQSPTDIYKKVVEFEETEAQSRSADKDAVLFKKICQD
VRQLFADIAELKVKGTEEAKEKIAAKRIEASLHLVALKKLNRLEKVRTRAGRDALHKEKQ
RVDSTHLLLQNLLYEADHLNKEVTKCLQFKSKDEEIELIPLEDFYKDAPSEISRPEITKM
NEHQLQLARLEWELRQRRELAGACSELVASKERVAAAIAAARSRLDALAPHLRDVLKATK
PLQECLALRLDEKRDETRAATLLPPPLFLLYANASAYSDALGVKNIIVGISGDEDEAKRL
EQLSNVESELVVSNDSDSDQENNDEDQTETKKKRHHRSTKISKEEKAEAKKKEVLKKHPL
NVQVTIKNNDGTAFNLIFSYMFHLKIVVVKFTMNFSKPVTGVSAADVLSGDCILNELYIG
DTGNDSPHPATAYLLNAAGISEKFQHFIPEVGKPYIWAQRMCGLDFMVVETDTKKYNKNL
QPCQSLSVASVESFIFTLKKRLKARIDLMKELQDLECGKILPAKGSEKACPVRLSGSLTQ
WQTVGWQEYSQASSTLFFISEGLVTADNMLYRAIITRQSAKLVAMVAISCDYPKQAPLFS
LTLHWNGTHHAGTSDDIRDIERVINTDWQSTETRQSSLSSQILKLLICLDILLETTGSSE
FPPDKVMLQSIRGRNRMKPYKFLNQGAGVFVQY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagacgatttatccaacaagaagcgacgcaaattaaatacaacaacatctacc
gaaaatactaaacagtctccaacggatatttacaagaaagtagttgaatttgaggaaaca
gaagcacaatcacgttctgcagacaaagatgcagttttgtttaaaaagatatgccaagat
gtccgtcaactctttgcagatattgctgaattaaaagtcaaaggaacagaagaggctaag
gaaaaaattgcagcaaaaaggattgaagcctcattacacttggttgcattgaaaaagctc
aatcgtttggaaaaagttcgtacaagagctggacgtgatgccttacacaaagaaaagcaa
agagtggattctactcatttactattacaaaacttgttgtacgaagctgatcatcttaat
aaggaagtgacaaaatgtttgcagtttaaatccaaagatgaggaaattgaattgatacca
ctggaagatttttataaagatgcaccaagtgaaatttcacgacctgaaataacaaagatg
aatgaacatcaactacagttagccaggcttgagtgggagttgcgacaacgtagagagctg
gcgggagcatgcagcgagctggtggcctcaaaagaacgtgtggccgctgctatagctgct
gcacgctctagattagatgctttggcaccacatctgagggatgttttaaaggccacgaaa
cctcttcaagaatgtttagctttaagactagatgaaaagcgagatgaaactagagctgca
acacttcttccaccaccattatttctactgtatgccaatgccagtgcatattcagatgct
cttggtgtaaaaaacataattgttggtatatctggagatgaagatgaagccaaaagactt
gagcaattatcaaatgttgagagtgagctagttgtttcaaatgattcagactctgatcag
gagaataatgatgaagatcaaactgaaactaaaaagaagagacatcacaggtcaacaaaa
atatctaaagaagagaaggcagaagctaagaagaaggaagttctaaaaaaacatccattg
aatgttcaagtgactatcaaaaataatgatggcacagcatttaatttaattttttcatac
atgttccatcttaaaattgttgtggttaaatttacaatgaatttttcaaaacctgttact
ggtgtgtctgctgcagatgttttaagcggtgattgtattttaaatgaattgtatattggt
gacactggtaatgactcaccccatccagcaactgcttatttgctaaatgctgcaggcata
tcagaaaagtttcaacatttcattcctgaagttggtaagccatatatatgggcacagaga
atgtgtggcttagattttatggttgtagagactgacacaaagaaatataataaaaattta
cagccttgtcagagtcttagtgtagcaagtgttgagagtttcatattcactttaaagaaa
agacttaaagcaaggattgatttgatgaaagaattgcaagatttagagtgtggaaaaatt
cttcctgccaaaggatctgaaaaagcttgtcctgtgaggttatctggttccttgactcaa
tggcaaactgtggggtggcaggaatatagccaagcctcttcaacattatttttcatatct
gaaggattagtaactgctgacaacatgttgtatcgtgcaattatcacaagacaatctgct
aaacttgttgcaatggtggcaataagttgtgattatccaaagcaggctcctctcttttct
ttaactttacactggaatgggacccatcatgctggcactagtgatgacattagggatatt
gaacgagttattaataccgattggcaaagtacagaaacaagacagtcttccttgtcctca
caaatattgaaattattaatttgtttggacattctgttagaaactacaggctcctcagaa
tttcctcctgataaagtaatgctacaatccattcgagggcgaaataggatgaagccatac
aaatttttgaatcaaggtgctggggttttcgttcagtattaa
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integrated database retrieval system
