KEGG   Melitaea cinxia (Glanville fritillary): 123656598
Entry
123656598         CDS       T09237                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
mcix  Melitaea cinxia (Glanville fritillary)
Pathway
mcix03030  DNA replication
mcix03410  Base excision repair
mcix03420  Nucleotide excision repair
mcix03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123656598
   03410 Base excision repair
    123656598
   03420 Nucleotide excision repair
    123656598
   03430 Mismatch repair
    123656598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcix03032]
    123656598
   03036 Chromosome and associated proteins [BR:mcix03036]
    123656598
   03400 DNA repair and recombination proteins [BR:mcix03400]
    123656598
DNA replication proteins [BR:mcix03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123656598
  DNA Replication Termination Factors
   ELG1-RFC complex
    123656598
Chromosome and associated proteins [BR:mcix03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123656598
DNA repair and recombination proteins [BR:mcix03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123656598
  Check point factors
   HRAD17(Rad24)-RFC complex
    123656598
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_14 AAA_22 RuvB_N AAA_11 DUF815 AAA_16 AAA_5 AAA_7 AAA_30 PhoH DEAD ResIII AAA_19 Mg_chelatase Sigma54_activ_2 AAA_24 Gp44_lid bpMoxR DUF7632 AAA_3 LisH_TPL TFIIE_alpha TIP49
Other DBs
NCBI-GeneID: 123656598
NCBI-ProteinID: XP_045448224
LinkDB
Position
9:complement(6504703..6513750)
AA seq 332 aa
MTVDGSQNLPWVEKYRPSKLEDLVSHDDIVKTINQFMKENQLPHLLFYGPPGTGKTSTIL
ACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMT
NDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLQQSQIVPRLQEIVQ
KENVKISEDGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDHVYTCVGHPLRSDVNYIM
NCLLNENDFAACFKQIQDLKIAKGLALGDILTEVHSIIQRVKFPPEVLISLLIKMADSEA
RLASGCSERIELAALIAAFQLCKDQIDVNALI
NT seq 999 nt   +upstreamnt  +downstreamnt
atgactgtcgatggtagtcagaatttaccatgggtagaaaaataccgaccgtccaaatta
gaagatctcgtatctcacgatgacatcgttaaaacgattaatcagtttatgaaagaaaat
caacttccacatctactattttatggtcctccgggtactggaaaaacatctactatacta
gcttgtgccaagcaaatgtatacaccacaacaatttaactctatggtgttagaattaaat
gcttcagatgatagagggataggcattgttcggggtcaaattctgagttttgcctcaaca
cgaactattttcaaagctggaccaaaacttataattcttgatgaagccgatgctatgaca
aatgatgctcaaaatgctttgcgtcgcattatagaaaagtatacagaaaacgtgcggttc
tgcataatatgtaactacctaggcaagataattccagcattgcaatcacgatgcacacgt
tttcgttttgctccgttgcagcagagtcagattgtgccgagacttcaagaaatcgttcag
aaggaaaatgtgaaaatatcagaagacggtatgaaggctctgctgaccctctctggaggt
gacatgcgcaaggtgctgaacacgctgcagagcacgtggctcgcctaccgtgacgtcacc
gaggaccacgtgtacacgtgcgtgggacacccgctccgctctgatgtcaattacatcatg
aactgcctcctcaatgagaacgatttcgctgcgtgctttaaacaaattcaagacctcaag
atcgccaaaggtttagcgctgggagatatactgactgaagttcactcaataatacaacga
gtgaaattcccgccggaagtattgatatcgttgttgatcaagatggctgactcggaagcg
cgtctcgcgagcggttgcagcgaacgaattgaactagccgcccttattgctgccttccaa
ctatgtaaagatcagatcgatgtgaatgctcttatctaa

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