Melitaea cinxia (Glanville fritillary): 123656863
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Entry
123656863 CDS
T09237
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcix03009
]
123656863
Ribosome biogenesis [BR:
mcix03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123656863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT
HEAT_EF3_GNC1
ChuX_HutX
Motif
Other DBs
NCBI-GeneID:
123656863
NCBI-ProteinID:
XP_045448431
LinkDB
All DBs
Position
10:complement(3557019..3570781)
Genome browser
AA seq
2775 aa
AA seq
DB search
MKNKPVKHKTTNTFRFVPFAERINSIDIRHAALYHIEHAYSSQPGENETHFHLALQKWHG
LNLTEKFKKFKKDVFGIVTVPQLIHKKDEVLCLLEEYLKLEDQLCLQPLLEILVSLAKDL
RSDFYPHFPKFLDILIKLLNTKDAERLEWTLVCLAFLFKTLKPYLKKDIGVIIVRIIPLL
SESQPQYINNFAAESFAFVARDIKDKKKFIELILNYLEKNDNSIAGCGHLFFEILRGVGN
KFHSCIENFLPLLLEHLKNKKAHQDILFRVLTQTFEDCLQGISPKEFNIFWSCIHKFTED
ILKENDDNAALEYILRLAGQVIEHMNGKYLTNPQQFTLLLVKVICEQSSEKVLEVCSQLG
ALMLLSSNISLSQEHAGILVKVLLPLPFPNILINFVESIVNYSQFDVHILPAFVKFVIQS
NFDNDAVATLAKICLTKSPVSMNGLKLFEWIKYPINFGKGLPQLMDYINTVLNEDLENIV
ENPNKLVNVLFCLPHIENLDVEICIKMLSGLISQLLKVLTSYNLDEQQEINKFHCDTTAL
SKCARKIMFLLATTLECSIHISNCKKIKEICDIDTLLPILLPCASDPNYLVALHVVDLYL
TAYEQENGLTYPFLSLVDSYLRINISSPFHIVRLLTTHIYKLFENIEELNKTVQVGGETE
RFSIFSNCFTVESTPSSIQEYRAQLNILQKMTFNTSQYELAKKTEFHLFALNYMLGVLYI
NFKLLWEPVGEFIAGYGNALSAEDFWPTFYKALESSFENAKMNLKVFQFEDDIVTGNDIL
KQLYADHNCIPERPDLHNYRNLILKIMTNCIQVCEAKNRDVVNLFLNFIEDEYKNNASVN
TLRINIEAYDKTKMEADDNEINAEEDTIVEIPEHDFKDSVSGKIVFKTLINVMQVLAHFK
NPRALHKEPEFWELYMEFLKHKNPGLQKFALDCVLNYKNKSLLPYKTNLQNLVDENKFKD
EMTQFKITEDSQAIQPEHRKDVIPIVLRILYGKMTSKLGADKKGGGQARRALVMRYISGC
SENELKMFIEMAFSQLKQYMTMKPREIYTDITNKLDLKSVISPGKIQSILNLFDVVREYF
GGYMKDTLLSDFLKIFFAVSSNLSGVLQNTDKVHVSYIKVMKHLRSMTISILGKLFDQFE
KYVWTNDELFVIFETLVWPLVTRLHIEGIHSPTVLLKLFNIWCQNPRYYVLLITCSEDGS
LLSPLPAIFKLLLAPKTNPGVVNFVLDMIEKLLTLTEDEEEKDIPSIESFSTLKVVGDDK
LDMNFGSKILIPHLPSILEVMKRRIANSAKSNTVNKRDLLILSRVTEMVTTPEMCDELLN
LLLPILVKKVCMNMAEENMEHAVNTIINLLGHSSNPQQYIKNIAVLFNKVGPVEVRKLLI
KLLTSIAESATVDKDKLSKMAHVITEMNAFNKRWIEQPDFDRRLDAYKLIYRMLESEEID
VDLTILIVNNCFFFIRTEKDIGLRDTAGLCLKKILPKLLSKYRSTHDGQFLVRDTVLSLI
STGIRDSKNDILHNESIMLLGELVRECPDADVVLSDLAPLTNKEDREVDFFDNSCHLQLH
RRVRALLKFSKVAKKMIKCPTPRTLTNFILPLASIYICDDKYSDKNSLIDACIEVIATCC
RLLPWYHYEVILKLYLNKMRHSTEHQKQLTRILIGILDAFHFDFSKVKNLELPKSLTVSI
KTNNITGLTKTKKLDEKLDESNKEKDDESKNEEDDSENEIDENEANNKTTERLEELETDL
LTGEEKDEETQTNKEVDNEPAFERITIVSPSVANRIIKSLSAGLLPQLNRAIGKLTEHEE
SHKLNRRRTGMVRLEEDMLRVPIALALVKLLQRLPGDILRSQLPGIIIKLCSFLKSPLKQ
VRITARDIVKKIMLTVGTEYLGVLLEHLTLLLTRGFQVHVLVATIHTVLDALKSDFKPGN
IDQNLDYILDVCTNDLFGSLSEEKEVDKLHYKTPEAKPSKKSYVTLLIVAQNITEKCLIN
LLLPFKEVLQKHHSKKIVVKVQEALMHITSGLVTNKFIEVESLFVFLHGLASESIPEFVL
SAPKRELTEAQREKMLRAKLDCFIVPEIPKRNKEFQARHVKTSSKTNAHVIIEFSLNILY
VILKREKIPRVDCKAFVDPLIPLLVDALKSDHVKVTTVAMKCIATLWTIRVSTPTLEEMA
KDIVKTIFSILHKYATFEISKQNDNYHLVRNAFKAVTVLVRNVKYFTLEAEQLKTLLLYA
EEDCQNDERQSNSFSLLKAILEAKLVSPELHEVMQKVSKICILSESARSREEARGIFVSY
LTHYTPGKRLEKYIQFFITQLNYELQHGRESSLKFLDMIIVKLNVDQLKSHGDYIFLSLG
ACMLNDSAPECRQAAAGCIESMLKKFPAIERNKLFELVLAFFKDTQPIHFELAAQLCIRF
VNVEEDKFQSRLSSVLSTISGKILLLSNNITEGRFVKIKLDESGKDDDEKQKERDHCLIQ
MLNLIDTITIHCPASMNNKKFSSDYDEIAEQCKALLAYPHSWVRLRAVKILGTILSAINV
EELNEISKENECERGFIFDDTENCIKSLVLDLCAQYTPNVSQDMADQVTDVLFRILKLVN
EMPRFKISKKSQSEDTEESKVNIRWILFKLRKAVNVEVVKAPNCMNIRSAIFTMWLHVIS
SLSPQELLTVIDVLLPPIVRELSTGEGMAATPAKQLAGRLGKKLRRKIGDIEYSKMAADA
QTKLNIKRAERKKLLLQEKVNNPEKAAKRKLHLREKKKQAKKIKLEMLHGKRPRAKKRKA
EDIDIEDELLNDNGE
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaacctgtaaagcataaaacaacaaatacctttcgctttgtaccttttgct
gagcgcataaattcaatagatataagacatgctgccttgtatcacattgaacatgcttat
tcaagccagccgggtgaaaacgagacacattttcacttagccttgcaaaaatggcatggt
cttaacctgactgaaaagtttaaaaaatttaaaaaagatgtgtttggtattgtgactgtt
ccgcaactaattcacaaaaaggatgaagtgctgtgtctcctagaagaatatttgaaattg
gaagatcaattgtgcttacaaccattactcgagattttagtatcattagcgaaagattta
cgcagtgacttctatccacattttcctaaattcctagacatactaataaaattattaaac
acaaaagatgcagagagactggaatggacattagtatgcttagcgtttttgtttaagact
ttgaaaccatacttgaaaaaggatataggagtgataattgtaagaatcatacctctgttg
agtgaatctcaaccacaatatataaataattttgcagccgaaagctttgcatttgtggct
agagatataaaggataaaaagaagtttattgaactcattcttaattacttggagaaaaat
gataattccattgcaggctgtggacatctattctttgaaatattgagaggtgttggcaac
aaatttcacagttgcattgaaaatttcttaccactgttacttgaacaccttaaaaacaaa
aaggcacatcaagacattctgttcagagtattgacacagacatttgaagattgtctacaa
ggcatatcacctaaagaattcaacattttctggtcctgtatacataagtttactgaagac
attttaaaagaaaatgacgacaatgcagctttagaatatattctaagattagcgggtcaa
gtaatagaacacatgaatggaaagtatttgacaaacccacaacaatttacacttcttcta
gtaaaagttatttgtgagcaatcatcagagaaagttctggaagtatgttcccagcttgga
gccttaatgctcctttcatccaatatttctctgtcccaggaacatgctggaattttagtg
aaagtactgctccctctgccgtttccaaatattcttataaattttgtggaaagtattgtc
aattattcacaattcgatgtacatattttacccgcgtttgtaaaattcgtaatccagtca
aactttgataatgatgcggtagcgacactcgcaaaaatctgccttaccaagtctccagtt
tctatgaacggcttaaaactatttgagtggattaaatatcctattaactttgggaaaggc
ttgcctcagctgatggattacattaatactgttttaaatgaggatcttgaaaatatagtt
gaaaatcctaataaattggtaaatgtattgttttgcctaccacatatagaaaacctcgat
gttgaaatttgtattaaaatgttgagtggtctgatatcacaacttctaaaagtattaact
agctacaatcttgatgaacaacaagagataaataaattccactgtgacacaactgctttg
tcaaaatgtgcaagaaaaattatgttcctgttagcaacaacattagaatgctccattcat
atatcaaattgcaagaaaataaaggaaatatgtgatattgatactctgctacctattttg
ttgccttgtgcttcagatcctaattatttagtagcattgcatgtagttgatctatattta
actgcatacgaacaagaaaatggtttgacatacccatttttgtcattagtggactcatat
ttgaggataaacatatcatctccttttcacatcgtacgtcttttaactacgcatatttat
aaattatttgaaaatattgaagaattgaacaaaacagtccaagtaggaggcgaaactgaa
agattttctatttttagtaactgttttactgttgagtctacaccatcttctatacaagaa
tacagggcacagttgaatattttacaaaaaatgacatttaatacttcacaatatgaactg
gcaaaaaagacagaatttcatctatttgccttaaattatatgttaggcgttttgtacatt
aattttaaattattatgggagccagtaggagaatttatagctggttatggtaatgcatta
agtgctgaagatttttggcctacattttataaagcattagaatcatcatttgaaaatgct
aaaatgaatttaaaagtttttcaatttgaagacgacattgtaactggtaatgatattcta
aaacaactgtatgcagatcacaactgtatacccgaaagaccagatttgcataattacaga
aatttaattttgaaaataatgacaaattgtatacaagtttgtgaagctaaaaatagagat
gtagttaatttgtttctaaattttatagaagatgaatataagaataatgcttctgtgaat
acacttagaatcaatatagaggcatatgataaaacaaaaatggaagcagatgataatgaa
ataaatgcagaagaagatactattgtagaaattccagaacatgatttcaaagactcagta
tcaggcaaaatagtttttaaaactttgataaatgtaatgcaagttttggcgcactttaaa
aatcccagagctctacataaggaaccagaattttgggaattatatatggaatttttgaaa
cataaaaatccagggcttcagaagtttgctttagattgtgttcttaattataaaaataaa
agtttattaccatacaaaactaatttgcagaatttagttgatgaaaataaatttaaagat
gaaatgacacagtttaaaataactgaagattcacaagccatccaaccagagcatagaaaa
gatgttataccaattgtactgagaatactttatggtaaaatgacatcaaagttaggcgct
gataaaaaaggaggaggacaagctcgaagagctttagtaatgagatacataagtggttgt
agtgaaaatgagctgaaaatgttcatagaaatggcattctctcagttgaagcaatacatg
actatgaaaccaagagaaatatatacggatataacaaataaattagacctaaaatctgtc
ataagtcctggaaaaatacaaagcattttaaatctgtttgatgttgtacgagagtatttt
ggaggttatatgaaggatacattattgtcagacttcttaaaaatattctttgcagtttct
tcaaatctatcaggtgtccttcaaaatactgataaagttcatgttagttatattaaagtt
atgaagcatctccggtcaatgactataagtatattaggaaaattgtttgatcaatttgaa
aaatatgtttggacaaatgatgagttgtttgttatatttgaaactttggtttggcctctt
gttacacgtctgcatattgaaggtatccatagtccaacagtattattaaaactatttaat
atttggtgtcaaaatcctagatattatgtattgttaataacatgctctgaagatggttcc
ttattgagtccactacctgcgattttcaaacttttgctagcaccaaagacaaatcctgga
gttgtcaattttgttttggatatgattgaaaaactgttaaccttgacagaagatgaagaa
gaaaaagatattcctagtatagaatcattttctacattaaaagtagttggagatgataaa
cttgacatgaatttcggtagcaaaattttgattccccatttgccgagtattttagaggtt
atgaagaggcgaattgctaattcagctaaatctaacacggttaataagagagacctttta
attttgtcaagagtaacagaaatggtcaccactcctgaaatgtgtgatgagttactgaat
ctcctactgcctatattagtgaaaaaagtttgtatgaatatggctgaagaaaatatggaa
catgctgtcaataccattattaatttacttggacatagctcaaatcctcaacaatatatt
aaaaatattgcagtcttgtttaataaagtgggaccagtagaagttagaaaacttcttatt
aaattgctgacttcaattgcagagagtgcaactgttgataaagataaattgtctaaaatg
gcgcacgttatcacagaaatgaatgcttttaataaaagatggatagaacaaccagacttt
gatcggcgacttgacgcttataaacttatatatcgaatgttagaatcggaggaaattgat
gtcgatcttacaattttaattgttaacaattgttttttcttcatacgtaccgagaaagac
ataggactacgtgacactgctggcttgtgtctcaaaaagattcttcccaaattattatcc
aaataccgttcgactcacgacggacaatttttagttcgagacacagttctctctctcata
tcaactggtataagagatagcaaaaatgacatattacacaatgaaagtataatgttactg
ggagaattggtacgagaatgtccagatgctgatgtagttttgtcggatttggctccatta
acaaacaaagaagatagagaagttgatttcttcgataattcttgtcaccttcagctacat
agacgtgtaagagcactactgaaatttagcaaagtagccaaaaagatgatcaaatgccct
acacctcgaacacttactaactttatattacctttggcttcaatttatatttgtgatgat
aaatacagtgataaaaattcacttatagacgcgtgcattgaagtcattgcaacttgttgc
agactgttgccatggtatcattatgaagtcatactaaaattgtatttgaacaaaatgaga
cattcaacagaacaccaaaaacaactcacacgtatattaatcggtatactagacgcattc
catttcgacttctctaaagttaaaaatttagaattaccgaaatcattgactgttagcata
aaaactaataatatcactggattaacaaaaactaaaaagctcgatgagaaacttgatgaa
agtaataaagagaaagatgatgaaagtaaaaatgaagaagacgattctgaaaatgaaatt
gatgaaaatgaagcaaataataagacgactgagagattagaagaattagaaacggattta
ctaacgggagaggaaaaagatgaggaaacccaaactaacaaagaagtagacaacgaacca
gcatttgaaagaattacaattgtatcaccttcagttgctaatagaataattaaatcttta
tctgcgggattactaccccaattgaatagggcaattggcaaattaactgaacatgaagag
tctcacaagttaaatagacgtcgtacaggaatggtacgcttagaggaagacatgttaaga
gttcccatagctttagcattagtgaaactcctccaaagattaccgggggatatattaagg
tctcaactacctgggattatcatcaaattatgttcctttttaaaatcacccttaaagcaa
gtgagaataacggcaagagatattgtaaagaagataatgttaacagtcggaacagagtac
ttgggcgtgttattagagcatttaacgcttttacttacacgcgggttccaagttcacgta
ctagttgctacaatccatactgtcttagatgccttaaaatctgactttaaacctggaaat
atagaccaaaatcttgattatatactagatgtttgtaccaatgacttatttggatctctg
tcagaagagaaagaagtagataaactccactataaaaccccagaagcgaaaccgagcaag
aaaagttatgtcaccctcttgattgtagcacagaatattactgaaaaatgtctaataaat
ctccttttacctttcaaagaagtgttgcaaaagcatcattcaaagaaaatcgtggttaaa
gttcaagaagcattaatgcatataacaagtggcttagtgacaaacaagtttatagaagtt
gaatctctttttgtctttctgcacggtctcgcttcagaaagtataccggaatttgttcta
agcgctcccaagcgtgaactaacagaggctcaaagggaaaaaatgttaagagctaaacta
gactgtttcatagtacctgaaataccgaaacgcaataaagaatttcaagcgagacatgta
aagacgtcttctaaaacaaacgcccatgttatcatcgaatttagtttgaatattttgtat
gtgatacttaaaagggaaaaaattccacgagtagattgtaaggcatttgtcgatcctttg
atacctcttctggtcgatgcgttgaaaagcgaccatgtcaaggtaacgacggtggctatg
aaatgtatagcgacattgtggactataagagttagtacaccaactctagaagaaatggct
aaagacattgttaagacgatcttttcgatactacacaagtatgcaacgtttgaaataagc
aaacaaaacgacaattaccatttagttcgaaacgcatttaaggctgtaacagtacttgtt
aggaacgtgaaatatttcacgctagaagcagaacagttaaaaacgctcctactctacgct
gaagaagactgccaaaatgatgaacgtcaatccaattcgttttcattattaaaagcaata
ttagaagcgaagctagtgtcgcctgaattgcatgaagttatgcaaaaagtgtccaaaata
tgcatcctaagcgaatcagctaggtcgagagaagaggcgcgtggaatattcgttagctac
ctaactcattacacgcccggtaaacgattggagaagtacatacaattctttataacacaa
cttaactacgagcttcaacacggcagagagtcctctttgaagtttttagacatgatcatc
gttaaacttaatgtggatcaactaaaaagccacggcgactacatttttctgtctctgggt
gcgtgtatgctaaacgatagtgccccggagtgtcgtcaggccgccgctggttgtatcgaa
tctatgctgaagaagtttccggctatcgagaggaacaaactatttgaattagtgctcgct
ttctttaaagacactcagcctatacattttgaactagcagctcaactgtgtattcgtttc
gttaacgtcgaggaagacaaattccaaagtcgcttaagcagcgtactttcaacaattagc
ggtaaaatacttttactaagcaacaacattacagaaggtcgattcgttaaaataaaacta
gatgaaagcggcaaagacgacgatgagaaacaaaaagaacgcgaccattgcttgatacaa
atgttgaacttaatcgatacgatcacaatacattgcccggcgagtatgaataataagaaa
ttttcgagcgattatgatgaaatagcggagcaatgtaaagcgttgttggcctaccctcat
tcttgggtgaggttgagagcggttaaaattttgggtacaattttgtcagcgataaatgtt
gaagagctaaacgagatttcgaaagaaaatgagtgtgaaagaggcttcatttttgatgat
actgagaattgtataaaaagtcttgtactagatttatgcgcacagtacacgccaaatgta
tctcaagatatggcagatcaggtgacagacgtgttattccgtatattaaaattagtgaac
gaaatgccgagattcaaaatttcgaaaaaatctcaatcggaagatactgaggaatcgaaa
gtcaatataagatggatactgttcaaattgcggaaggctgttaacgtcgaagtggtcaaa
gcacctaattgtatgaacattagatccgccatattcacaatgtggttacacgtcatcagt
tctttatctcctcaagaattactaacagtaatcgatgtattactaccgccgatcgttcga
gaactttcgaccggtgaaggtatggcggctacacctgcgaaacaattggcgggaagattg
ggcaagaaattaagaagaaaaataggtgatattgagtacagcaagatggcggctgatgct
cagactaagctgaatattaaaagagcggaaaggaaaaagttgctgctacaagagaaggtc
aacaatccagaaaaggcagcaaagagaaaactccatttgcgcgaaaagaagaaacaggca
aagaaaattaaattagaaatgttacacggaaagaggccgagagctaagaaacgtaaggcg
gaagatattgacatagaggacgagttgttaaacgataatggggagtga
DBGET
integrated database retrieval system
