Melitaea cinxia (Glanville fritillary): 123656942
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Entry
123656942 CDS
T09237
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123656942
03036 Chromosome and associated proteins [BR:
mcix03036
]
123656942
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123656942
Chromosome and associated proteins [BR:
mcix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123656942
SLIK complex
123656942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
123656942
NCBI-ProteinID:
XP_045448509
LinkDB
All DBs
Position
1:11664220..11683894
Genome browser
AA seq
1821 aa
AA seq
DB search
MNLKGSINESGSESMSEKEEKSDSSGSGSGSESDSGSSSSGSGSAGRSGSEKSSNADRSH
LSDGTKSSPKHSNANSSKSDHHTDKDSSDDSISKRKSRNNYGKVKSDLWEDNPDIYGIRR
SARSRKEPDRLKLADSDSSDRGRSHNRRNKKKSGSWNSETSDSDSDMKASPPPPSKRPGQ
RSVPLRKKKPSRRRFTSDEDESSEASDEETRSRTATRRTGAAVSYKEASDEQTDSSDLLE
VEGEGEVEPEPEDHSETIERVLGHRRGKKGVTGNVTTVYYVEENGDPNEGCNPDDEEATE
SQYLIKWKGWSHIHNTWESEKSLNEQKVKGLKKLENYIKKEAELSWWRQQAGPEDIDYFE
CQSELQQELVKTYNFVERIFAEQTRELEGGGTAHEYFCKWESLPYADATWEDSALIEKRW
PEEVATFKSREAAKTTPSRHCPVLKRRPKFHQLKEQPEYMGKDQSYELRDYQMDGLNWLI
HSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQREFTQWA
PDINVVTYIGDVTSRNIIRQFEWSFASSKRLKFNAILTTYEILLKDRQFLRSFSWACLLV
DEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEEFEK
DHEDAATRGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKN
YSALRKGVKGSMNTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGKLL
LLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEIRKQALDHFN
AEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYR
LVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASGTNANNPFNKEDLNAIL
KFGAEELFKDDDENDEDPVCDIDEILQRAETRDEGPTMAGDELLSAFKVASFAFDEEKAV
MEVKKESTEEEGKDWDDIIPENVRKTIAEQEKTKEMEDLYLPPRRKNNQQSNVDSKGGRK
RRGRSGVDGVEGGDGADGEGDVESDISDADVSADDDRPRKRGRPPASHREKIKGFTDQEI
RRFVKSFKKFSAPLKHLDSIACDAELQEKPLADLKKLGEILQERCKAVLNDTKESINENN
DGRKNARKTFKLGGVPVNAKTMAACQDELAPLDEFLPQTKEERLKWQLDFRTRPANFDVE
WGVEDDSKLLAGIYQYGMGSWEAIKMDSSFVIGDKILTNEDKKPQAKHLQSRAEYLLKLI
KKLLDQKHGKQKQRKPRMKKGAKEPVTKDTIDDDMSSGNENKKINKSVKNDKGEKGKSKL
EDTLTHDETSNDRKEKDKKRTRKEGKDRTKNDKVRGRKKPAGPMHFTANNEPRALEVLGD
LDPSVFEECKEKMRPVKKALRALDNPDQTLSETEQVSRTRACLTQIGNQIDICLSEYPDP
EKKVEWRSNLWYFVSKFTNFDAKQLYRLYKYGLKKNVESKKDGKHKENKLNAKNNISSTN
NHVKSYKKEVKHDDNNRKEKRPKFDKDKTDKNNEKVPHASGLKRKLEEGECDPDSNENKR
HERHKLKHKERRDREGSLKRDDLMYRERSRTDRERERDRDRDRERDRDRERDRDRERDRD
RDRDRDRERSRTRRDSGGVGPPRVRPPYAPHAHADHAAHPAHPAHPAWTPPAYPGPRQYR
GGDRNARLHDKRRFGGYAAMGGPYSGYYDGAAMPGGMGFPPVRPYPDDWRGYTAQSDYTY
DERDYEREVYRRDYDRRAPPT
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaagggctctattaatgaatctgggagtgagtctatgagtgagaaagaagag
aaaagtgattctagtggatcaggctcgggaagtgaaagtgatagtggatcgagctcttct
ggatcagggtcagctgggaggtcgggatctgagaaatcttctaatgcagataggtcacat
cttagcgatggcacgaaatcttcaccaaaacacagtaatgccaattcttctaaatctgat
catcacaccgataaagattcttctgatgactctatatctaaacgaaaatcaagaaataat
tatggaaaggtcaaatcagacctctgggaagataatccagacatatatgggattagaaga
tcggcaaggtcgagaaaagaaccagatcgattaaaactcgctgatagtgactcaagtgat
agaggacgtagtcacaacagacgaaataaaaaaaagagtggttcctggaactctgagact
tctgatagtgatagtgatatgaaagcttccccacctcccccctcaaagcgaccaggccaa
agaagcgtccctcttagaaaaaagaaaccatctagaagaagatttactagtgatgaagat
gaaagttcagaagcttctgatgaagaaactaggagccgcacggctacacgacggactggc
gcagctgttagttataaagaagcgagtgatgaacaaactgactcttctgatttattagaa
gttgaaggagaaggtgaagttgaacctgaacctgaagaccacagtgagacaattgaaagg
gtactaggccacaggcgaggcaaaaaaggagtcactggaaatgtgactacagtttactat
gtagaagagaatggggatccaaatgaaggttgcaatcctgatgatgaagaggcaactgaa
tcgcagtacctgatcaaatggaaaggctggtctcatatacacaatacatgggagtccgaa
aaaagtcttaatgaacaaaaagtaaagggactaaaaaagttagaaaattatataaaaaaa
gaagcagaattaagttggtggagacaacaggcggggcctgaagacattgattattttgag
tgtcagtctgagttacaacaggaattagttaagacctacaattttgtagaaaggatattt
gctgaacagacacgtgaactagaaggcggtggtactgcacatgagtacttttgtaaatgg
gagtcattaccttatgcggacgcaacttgggaagattctgctctaatagaaaaaaggtgg
ccagaagaagttgctacttttaaaagtagagaagctgctaaaaccactccatccaggcat
tgccctgttttaaaacgacggccaaaatttcatcaacttaaagaacaacctgaatatatg
ggcaaagaccagtcctatgagttgagagattatcaaatggatggcttaaactggttaata
cattcctggtgtaaagataattccgtcatactagctgatgaaatgggcttaggaaaaacc
atacagacaatatgttttttatattatctatttaaatctcaacaactttatggaccattc
ctttgcgtggtaccattaagtacaatgacagcatggcaaagagaatttacacagtgggca
cctgatattaatgtcgtaacttacattggtgatgtcactagcagaaatatcatcaggcaa
tttgaatggagttttgctagttcaaaaagattaaaatttaatgctatcctaactacatat
gaaatattattaaaggatagacaatttctaaggtcttttagttgggcctgtcttttagta
gatgaagcacacaggttaaaaaatgatgattcccttttatacaaagcattaaaggaattt
gatactaatcataggttattagttactggaactccattacaaaactccttaaaagaatta
tgggctttgctacattttataatgccatacaaatttgaatcttgggaagaatttgaaaaa
gatcatgaagatgcagcaactagaggctacgaaaaattgcataagcaactggaacctttt
atattacgaaggcaaaagaaagatgttgaaaagtctttgcctgcaaaggtagaacaaata
ttaagggtagaaatgacttccatacagaagcaatattataaatggatacttacaaaaaat
tacagtgctttacgaaaaggtgttaaaggctcaatgaacacatttattaatattgtgatc
gaacttaaaaagtgttgtaaccatgcactcttgacaaaacctgaagactttgaatcaaga
gcatctcttgcaactacagatgctgttgagaaactactaagaggttccgggaaactgcta
ttgttagataaattattgtgtaggttgaaagaaactggtcacagagttcttatattttct
caaatggttagaatgttggacatccttgccgaatatttgcaaaggcgacattttccgttt
caacgactagatggaagcataaaaggtgaaataagaaaacaagcccttgatcattttaat
gcagaagggtcccaagatttctgttttttactgtcgacacgtgccggtggacttggtatt
aacttggccacagccgacactgttattatatttgactctgattggaatccacaaaatgac
ttacaagcacaagctcgcgctcatcgtataggacaaaaaaatcaggtcaatatttatcga
ttagtaactgctagatctgttgaagaagatatagtagaaagagctaaaaggaaaatggtt
cttgatcatctagtcattcaaagaatggatacaacaggtagaacagtccttaacaaacga
gatgcgtcaggtacaaatgcaaacaatcctttcaataaagaagatttaaatgcaattctt
aaatttggtgcagaggagttgtttaaagatgatgatgaaaatgatgaggacccagtttgt
gacattgacgaaatcttgcaaagagcagaaaccagagatgagggaccaaccatggcagga
gatgaactactttctgcatttaaagttgctagctttgcatttgatgaagaaaaagctgtg
atggaagtgaaaaaagagagtactgaagaagaaggcaaagattgggacgacattattcca
gaaaatgtgagaaaaactattgcagagcaagaaaaaactaaagaaatggaagatttatat
ttaccacctaggcgaaaaaataatcaacaaagtaatgttgatagcaaaggtggtcgtaag
cgacgaggtcgtagcggtgtggatggcgttgaaggcggtgacggagcggatggcgagggt
gacgtagagagtgacatttcggacgccgatgtgagcgccgacgacgaccggccgaggaag
agaggccgtccaccagcgtcgcacagagaaaagataaaaggattcactgatcaagaaatt
cgtaggttcgtcaaaagctttaagaagttctcggcacccctaaaacatctcgacagcata
gcttgtgatgcagagcttcaggagaagccattggcggatctgaagaagttaggagaaatt
ctccaagagagatgtaaagctgtgttaaatgacacaaaagagagtattaatgaaaacaat
gatggccgcaaaaacgcaagaaagacatttaagcttgggggtgttcctgttaatgctaag
actatggcagcctgtcaggatgaacttgcacctttggatgaatttttgccacaaactaaa
gaagaacggttaaaatggcaactggatttcaggacaaggcctgcaaactttgatgtggag
tggggagttgaagatgattctaaactattggctggtatatatcagtatggcatgggatca
tgggaggccattaaaatggactcatcattcgttattggtgacaaaattcttaccaatgaa
gacaagaaaccgcaggccaaacatttacaatcaagagcagagtatttactgaaacttatt
aaaaagttgcttgatcagaaacatggtaagcagaaacaaagaaagcctcgaatgaagaaa
ggagctaaggagcccgtgactaaagatacaattgatgatgatatgagttctgggaacgaa
aataaaaaaataaataaaagtgtaaaaaacgataaaggagaaaagggtaagtcaaaactt
gaggatacactaacgcacgacgaaacatcaaatgacagaaaagaaaaggataagaaacgt
acaaggaaagaaggaaaagatcgaaccaaaaatgataaggttaggggtcgtaaaaaaccg
gctggtcctatgcattttacagctaacaatgagcccagggctttagaggttttaggcgat
ttagatccgtcagtgtttgaagaatgtaaagaaaaaatgagacctgtcaaaaaagctctt
cgagctcttgacaaccctgatcaaactttgtcagaaactgaacaagtatccagaacgaga
gcttgcctaacacaaataggaaatcaaatagatatatgtttatctgaatatccagacccc
gagaaaaaagttgaatggaggagtaatctctggtattttgtttcaaaatttactaatttt
gatgctaaacaactatataggctatataaatacggtcttaagaaaaatgtagaatcgaag
aaagatggtaaacataaggaaaacaagttaaatgctaaaaataacataagcagtactaat
aatcatgttaaatcttataagaaggaagtgaaacacgatgataacaatagaaaagaaaag
agaccgaaattcgacaaggataaaacagataaaaacaatgaaaaggtacctcacgcttct
ggattaaaaagaaaacttgaggaaggtgaatgtgatccagattcaaatgaaaacaaaagg
catgaaagacataaactcaaacacaaggaacgcagagatagggaagggagtttgaagcga
gacgatttgatgtacagagaacgaagccggacggatcgcgagagggaacgagatcgagac
cgagaccgcgagcgtgatcgagatcgagagcgcgaccgcgatcgagaacgcgaccgggat
cgggatcgcgaccgtgatcgtgagcggtctcggacgcggagggacagtgggggcgtgggg
ccgccgcgggtgcgtccaccctacgcgccgcacgcgcacgccgatcacgccgcgcaccca
gcgcaccctgcgcaccccgcctggacgccacccgcctatcccggcccgcgacaataccgt
ggtggtgaccgtaacgcgaggctgcacgataagagacggtttggaggatatgcggccatg
ggtggtccttacagtggatattatgatggcgcagcgatgccggggggtatgggttttcca
cccgtgcgaccttacccggacgattggcgtggctacacggcgcaatcggattatacctac
gacgagcgagattatgagcgcgaagtctaccgaagagattacgatcggcgggcaccaccg
acttag
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