Melitaea cinxia (Glanville fritillary): 123656975
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Entry
123656975 CDS
T09237
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix04140
Autophagy - animal
mcix04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123656975
04148 Efferocytosis
123656975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcix04131
]
123656975
Membrane trafficking [BR:
mcix04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123656975
Hops complex
123656975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
DUF4562
zf-C3HC4_2
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-RING_5
zf-RING_Vps41
zf-RING_UBOX
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
123656975
NCBI-ProteinID:
XP_045448539
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All DBs
Position
10:5218090..5227534
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AA seq
987 aa
AA seq
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MTSIFDQYEQASQVSQRSVPASEQMTSSGYINMQLNDNTPMFSKQKMNFNPSDLITHVAV
CSDYLVLAMANGKLFRLDLKMPDQHEEIHYSKFVQPNTKLTSIFLDPLGYHLLLAFTPRN
KDGNPELVYLHRKSSKLKTVTKSRNYEVTEVGWNYENKSINTTGPILLGTSQGHILETEL
EADSDKMFTASQQYWRQLPNYLPLYGGKEIDGLIFDIGKGQDTPITGIQFHRVANTSKYF
IFVTTPTRLYQFIGHAMIADDKPSLQSIFHTYLTTPETGFQEIPSTLKYSKLQFYFDKTN
TPKTFAWLTEPGIFYGQLDPTSQQNSNSLFTQSELINYPSNGTNSKDNTPLSFVLTEFHA
ILMYPDRVKAVSLLNQELVYEDKYSEVHGKLKNIVKDPIRRTIWAVTGNAVFRYKVSREE
RNVWRIYSDKEQFDLAKQYCQNNPAFIDIINVKQAELLFTKGDYEKSAEIYAETQSSFET
VCLKFLEVEQVNALKVYLGKRLNALDDDKTLISMIVIWMTELYLSQLGTMRRTGKDDSQE
YHQIQSDFEVFLLQPKVVKCMQHIKSVVYDLMSSHGDKQNLIKLTVINEDYENVVAQNIY
KKSYMEALKMLTTLKKSDLFYQFAPSLLEEIPKQTINALIAQGPLLSPSKLLPAFLSCKN
DEVHITEIIRYLEFMLQNYNVKDRAIHNYLLTLYVENDQQALMRYLARQGQELTMVNYDV
HYALRLCREKGLSEACVKLSALLGLWESAAELALELDLSLAKSLADMPDDISLQRRLWLG
IAEHVITKNQDIKEAMSLLEECPLIKIEDILPFFSDVVTIDHFREPICQSLQEYNNQIEE
LKAEMEDATKSAEYVRGEIQSFRARAVLVGVADACCLCDIALLLRPFYLFPCGHRFHGDC
LLAEAQPALAPARRKKLTDLQRQLAVLSNIELSTVTSSGLPLREVLRNEVDDIVANECIF
CGEYMIACIDKPFIANEDWDRVMKEWE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatttttgatcaatatgaacaggcctctcaggtttcacagcgttctgtacca
gcctctgaacagatgacgtcttctggatatatcaatatgcagttaaatgataacacacct
atgttttccaagcagaagatgaattttaatccatctgacttgataactcacgttgctgtt
tgcagtgactacttagttcttgctatggctaatggaaagctgtttaggcttgatttaaaa
atgcctgatcaacatgaagaaatacattactcaaagtttgtgcaaccaaatacaaaacta
acgtccatattcctggaccctctcggctaccatctcctcttggccttcactccaaggaac
aaggatgggaaccctgaacttgtatacttacatcgtaagagcagcaagcttaagacagtt
acaaaatctagaaattacgaagtaaccgaagtcggttggaattatgaaaataagtcgata
aacacaactgggcccatattacttggaacatctcaaggacatatattagaaactgaatta
gaagctgacagtgataaaatgtttacagccagccagcagtactggagacagctgcctaat
tatctgcctttatatggaggcaaggagattgacggtttgatatttgatattggtaaaggt
caggacacaccaataactgggatccaattccatagagtagcaaacacaagcaagtacttc
atatttgttacaacaccaacaagattgtaccagtttataggacatgctatgatagcggat
gataaaccatccctccagtccatattccatacatatctcacaactccagagaccggtttc
caggaaataccatccaccttaaaatattcgaaacttcaattctattttgataaaacaaac
actcctaaaacatttgcttggttgacagagcctggcatattttatggacaattagaccca
acgtcgcaacaaaattctaactcactttttactcaaagtgaactcattaactatccatca
aatggtactaacagcaaagataatacaccactctctttcgtcctaacagaatttcatgcg
attcttatgtaccctgatagagttaaagctgtatccctgttgaatcaagaactcgtctat
gaagacaaatactccgaagttcatggaaaattaaagaacatagtaaaagatccgataaga
cgaactatttgggccgtcacaggcaacgctgtctttagatacaaagtcagtcgagaggag
agaaacgtatggaggatttattcggacaaagaacaattcgatttagcaaaacaatattgt
caaaataatcctgcttttatagatatcataaacgtgaaacaagcggaattgcttttcact
aaaggcgattacgagaaaagcgcagaaatttacgcggaaacacaaagcagttttgaaaca
gtttgcttaaagtttttggaagtggagcaagttaatgcgctaaaagtttacttaggaaag
agactgaatgctttggatgacgacaaaactctaatatcgatgattgtgatttggatgaca
gagctatatttatcgcagttggggacaatgagacgtactggtaaagacgattcacaggag
taccatcaaattcagagtgatttcgaagtatttttacttcagccaaaagtagtcaagtgc
atgcagcatataaaatcagtggtatatgacctgatgtcctcccatggagataaacagaac
cttattaaattgacagtaatcaatgaggactatgaaaatgtagtcgcccaaaacatttac
aagaaatcgtacatggaagctttaaaaatgctgacgactttgaagaaatctgatttgttt
taccaattcgcgccatctctactggaggaaatacccaagcagacgattaacgctctaatc
gctcaaggacctctactaagcccttcaaaattattaccagcatttctttcttgtaagaac
gatgaagtccatattactgaaattataagatatttggagttcatgcttcaaaattacaac
gttaaagatcgagcgatacataattacttgttgacattgtatgtggaaaacgaccagcaa
gctttaatgagatatcttgcaagacagggtcaagaattgacaatggtcaattatgatgtt
cattatgctttgaggctatgtagagagaaaggtctctccgaggcatgtgtgaagctgtca
gctctactaggcttgtgggagtcagcggctgaattagcattagaattggatttatcttta
gcgaaaagtctcgcagatatgccagatgatataagcttgcaaaggcgattatggctgggc
attgctgaacatgttataacgaagaatcaagatataaaagaagcaatgagtctgctcgag
gagtgtccccttattaaaatagaagatatcctgccgttcttcagcgacgtcgttactatt
gatcactttagggaaccaatttgtcaatctttgcaggaatacaacaatcaaatagaggag
ttaaaagctgaaatggaagatgccacaaaatcggctgaatatgtgcgcggcgagatccag
tcgttccgcgcgcgcgccgtgctggtgggcgtggcggacgcgtgctgcctgtgcgacatc
gcgctgctgctgcggcccttctacctgttcccctgcggacaccgcttccacggcgactgc
ctgctggccgaggcgcagcccgccctagctccagcgcgtcgaaagaaacttacagatctc
cagcggcagctcgccgtgctgtcgaacatcgaactgtccacggtgacgtcgagtgggctg
ccccttagagaagtattgaggaatgaagtggacgacattgtggccaacgagtgtatcttc
tgcggcgaatatatgatcgcttgcatcgacaagccgttcatcgctaatgaagactgggac
cgagtcatgaaggaatgggaatga
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