Melitaea cinxia (Glanville fritillary): 123657548
Help
Entry
123657548 CDS
T09237
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix04140
Autophagy - animal
mcix04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123657548
04148 Efferocytosis
123657548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcix04131
]
123657548
Membrane trafficking [BR:
mcix04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123657548
Hops complex
123657548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
123657548
NCBI-ProteinID:
XP_045449031
LinkDB
All DBs
Position
11:complement(4521343..4531901)
Genome browser
AA seq
835 aa
AA seq
DB search
MSALLTADWFQLDSYYRKFDLYNMIWSMDEGLGNMIVSGAPYGGPIAVVRDRKQFVRIMS
NAKPVITIYNCVGNTISKILWNSGVLVHMGWSDGEQLLCVQESGDVLIYDMFGAYQKTFS
MGQEVRDTKVCKAQLFSNSYGIGLAVMTTTNRMFLVSNVSEPKIRTVPDVPRANEPIASW
CVLSSGLRSSAVIGFLVCRDKEIYRCQLGESRPILMRPEITSAYTQILTIVPSQNGLHIA
LFTDSGMLWLGSSDFKTKYCEIDTGYIKQPKELLWCGSKAIIGHWDDTMCIYGFNGTTIT
YPYDGPFHLISEIDCVRIISEMTHELIQKVPDVVEKIFRINSTAPGSYLVEASKQFQKRS
HRADEYIRLVKPDLASAVQDCIDAAAFEFNTDVQKMLARAAQFGKGFLSDTVLTEHYVRT
CRWLRVLNAVRDPRVAIPLTSLQVQNLGERILLDRLIWRRLHCLAGHIASYLQLKDGQTR
VLSHWACYKVTQPHLDNESAAREIGEKLRNIPGISYSTIAMKAAEKGRKTLAIKILEYET
RSKLQVPLLLALGEGPTALLKATASGDTDLVYIVLLHLKEKMGKHEFELTIRSFPLAHAL
YIKYCATHNREALRQVYVQEDDFAGQAASHVREALELSEPGAREASLLSARECHRKGRNE
LGVSICEEARKLCKQQSSLQETYGESFVGLSLHDTVKKLLKQGEIKFADKLRSEYKMPDK
RYWWLRILTLAERDEWAQLEVFSKSKKSPVGYEPFVDACLKYGKNDEALKYLPKCRDDIK
VKYYVKAEFYEEAAQVAFEQKDESALFFVQNKCPVRESTKHAKIKALVEQLSTKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccttattgacggcagattggtttcaactagattcctactacaggaaatttgat
ctctacaatatgatctggtcaatggatgaaggtttaggcaatatgatcgtaagcggagca
ccctacggtggaccgatagctgttgtaagagataggaaacaatttgttcgcatcatgtca
aatgctaaaccagtcattacaatttataactgtgtgggaaatactatatctaaaattttg
tggaatagtggtgtgcttgtccacatggggtggtctgatggtgaacaacttctgtgcgtg
caagaaagtggagatgttcttatttatgatatgtttggtgcctatcagaagacatttagt
atggggcaagaagttagagatacaaaggtgtgcaaagctcagttattttcaaactcctat
ggaattggtctcgccgtcatgactacaaccaaccgtatgttcctagtgagcaatgtctcc
gaaccgaaaataaggactgtgccagatgtaccaagagccaatgaaccaatagcatcttgg
tgtgttcttagttccggtttgagatcttcagcagttataggattccttgtttgtagagac
aaagaaatttatagatgtcaacttggcgaatcaagacccattcttatgcgccctgaaata
acaagtgcatatacccaaatactaacaatagtaccgtcacaaaatggacttcatattgct
ctattcactgattctggaatgttatggctcggatcatcagactttaaaacgaagtactgt
gaaattgatacaggatatatcaaacaacctaaagagttactatggtgtggatcaaaagca
ataatcgggcactgggatgatacaatgtgtatctatggctttaatggtaccacaataaca
tatccatatgatggaccattccatctgatatcagagatagattgcgttcggattatatca
gaaatgacacatgaactgatacaaaaagtgccagatgtagtggagaaaatattcagaatt
aatagtactgctccaggatcatatttagttgaagcttcaaaacaatttcaaaagcgcagc
caccgcgctgacgagtacatccgcctcgtgaagccggacctggcgagcgccgtgcaggac
tgcattgacgcggccgccttcgagttcaacaccgacgtgcagaagatgctggcgcgcgcc
gcgcagttcggcaagggcttcctcagcgacaccgtgctcaccgagcactacgtgcgcacg
tgccgctggctgcgcgtgctcaacgccgtgcgcgacccgcgcgtcgccatcccgctcacc
tccctgcaagttcaaaatttaggcgaaaggatcttactagatagattgatatggcgccgc
ttacactgtctagctggtcatatcgcttcctatctacagctgaaagatgggcaaacgaga
gtattgtcacattgggcctgttataaggtaacacagcctcacctagacaacgaaagtgcc
gctcgagaaataggcgaaaagctacgaaacattcctggcatttcgtactccactattgct
atgaaagctgcggaaaaaggaagaaaaacattagccattaagatattagaatatgaaacg
cgtagtaaactgcaagtacctttgctgttggctctcggagaaggtcctactgcccttttg
aaagctacagcgagtggagacacagatttggtctacatcgtccttttacatttaaaggaa
aagatgggaaaacatgagtttgaactaacaatccggagcttcccactagcgcacgcgctg
tacatcaagtactgcgcgactcacaaccgcgaggcgctgaggcaggtgtacgtgcaggag
gacgacttcgcagggcaggccgcctcgcacgtgcgcgaggcgctggagctcagcgagccc
ggcgccagggaggcctcgctgctgtccgcgcgcgagtgccaccgcaagggccgcaacgag
ctaggtgtatctatatgtgaagaagcgagaaaattatgcaaacaacagtcaagtctacaa
gaaacatatggcgagagcttcgtcggtctctcgttacatgacaccgttaagaaactttta
aaacaaggggaaataaaatttgctgataaactaagatctgaatacaagatgcctgacaaa
aggtactggtggctacgaatcctcactttagcagaaagagacgaatgggcgcagttagaa
gtattttctaaatcgaaaaaatctccagttggctacgagccttttgtagacgcttgtctc
aaatatggcaagaacgacgaagctttgaaatatttaccaaaatgtcgagacgatatcaaa
gttaaatactacgttaaagctgaattttatgaagaagctgctcaagtggctttcgaacaa
aaggatgagagtgcattatttttcgtccaaaataaatgtccagtacgggagtccactaaa
cacgctaaaattaaggcacttgtggaacaattgtccaccaaaaaataa
DBGET
integrated database retrieval system
