Melitaea cinxia (Glanville fritillary): 123657571
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Entry
123657571 CDS
T09237
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03018
RNA degradation
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123657571
09123 Folding, sorting and degradation
03018 RNA degradation
123657571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123657571
03041 Spliceosome [BR:
mcix03041
]
123657571
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123657571
mRNA degradation factors
5'-3' decay
Lsm complex
123657571
Spliceosome [BR:
mcix03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123657571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
123657571
NCBI-ProteinID:
XP_045449053
LinkDB
All DBs
Position
11:10994476..10994945
Genome browser
AA seq
96 aa
AA seq
DB search
MASGLENYINQTVSVITADGRNFIGTLKGFDQTINIILDESHERVFSTSTGVAQVVLGLH
IIRGDNIAIVGQIDESIDSRLDLGNIRAEPLGSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggattagagaattatatcaatcaaacagtgtctgtgataaccgccgatggc
cggaattttattggtaccttgaaagggttcgatcagacaataaacattatattagatgaa
tcccacgaaagagtgttttccacatcaactggagtggcacaagttgtacttggacttcat
atcattcgaggagataatatagcaatcgttggacagatagatgaatccattgacagcaga
ttagacctcggtaacatcagagcagaacccttaggatctattgtacattag
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