KEGG   Melitaea cinxia (Glanville fritillary): 123657766
Entry
123657766         CDS       T09237                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
mcix  Melitaea cinxia (Glanville fritillary)
Pathway
mcix03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mcix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    123657766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcix03400]
    123657766
Enzymes [BR:mcix01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123657766
DNA repair and recombination proteins [BR:mcix03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     123657766
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase BRCT_2
Other DBs
NCBI-GeneID: 123657766
NCBI-ProteinID: XP_045449235
EnsemblRapid: ENSMCXG00005019947
LinkDB
Position
11:complement(11472083..11477099)
AA seq 928 aa
MSDTTPFYVDRAKGGRASCKGCKGNCPSGELRLAKLVFSPYGENQQMKSWHHLDCLMNVL
LKQRPTTKRIDSIDDIGNWENISKEDQEFILKKINEMEQLYAEKNSGKYTAKVLKNESSP
KIDITKTSDIDTKKDTDVEDDKFSTFFSLCQKISKVDAYTEKTAVINNFFTKGCDGKKFQ
GNIKLWCKLLLPQVSKRVYNLKSKQLVKLFSRIFSTDHDDMLTHLEQGDVADTIQHFFTK
SNALKPSTDSVLSIQNVDDFLQELSKFTKEDEQIYHFKKFVKKCTVNDIKMLIRLIKGDL
RINAGPKHILEGVHPDAYNIFRTSRDLDMVLNRVLPQTNDVKHKDAFQKNVQAKLTLMTP
VLPMLAEACKSVEMAMKKCPNGMFSEIKYDGERVQVHKKGNEFKYFSRALKPVMAHKVSH
FKDYLPQAFPKGDDLILDAEVLMVDVKTGKPLPFGTLGIHKQSEFKDAQVCLYIFDCLYY
NGEILMDKPIRKRRKLLHDIMVEVKNHVMFSEQELINKPADLANMIAKVLQLGLEGLVLK
DLESIYEPGKRHWLKVKKDYLFDGAMADSADLVVLGAWFGTGKKGGMMSVFLMGCLDKHR
NKWVTVTKVHTGHDDSTLERLQKELNPLMVKISQDYSRVPSWLDCNKGMVPDFVALDPQK
QPVWEITGTELTKANLHTADGISVRFPRVTRIRDDKNWESATNLEELKHLYKTSKEKTDV
SLLNKLAATASDNYEPPPKKLKKTPIKKEIKAVKAEKSPIKTGILNKFFTKFSTVTSKIE
KEPNSEDKKIIKQEDFDNNSEYLNDTYKNQDIKKEKTHQQTLPEDPLPDVFINKRIGFYP
DFISIPEKERRYFERHWIAYGGTVVKAIKAMDVDYVVHNNDTIDFKKMTKLKNKLPTGVR
HVTKSWLIKCINNVELCETINYTVLVEP
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtctgatacaacacctttttacgttgaccgagcaaaagggggccgagcttcatgtaaa
ggttgcaaagggaactgtcccagtggagaattacgtctggcaaaattagtttttagtcca
tatggagaaaatcaacaaatgaaatcatggcatcacttagattgtctaatgaatgttttg
ttaaaacaacgaccaacaaccaaacgtatcgattcaatagatgatattggaaactgggaa
aatatttctaaggaagatcaggaatttatattgaaaaaaatcaatgaaatggagcaacta
tatgctgaaaaaaatagtggaaaatatactgcgaaagtgttaaaaaatgaatcgtcgccg
aaaatagatattacaaaaaccagtgatatagatacgaaaaaagacactgatgtcgaggac
gataaattctccacattcttttcattgtgccaaaaaatatctaaagttgatgcctataca
gaaaaaactgcagtaattaataatttcttcactaaaggatgcgacgggaaaaagtttcaa
ggaaatattaaattatggtgtaaactactcctgcctcaagtttctaaacgtgtctataat
ttaaaaagtaaacaattagtaaaacttttttcgaggatatttagcacagaccatgatgat
atgttaacacatttagaacaaggtgatgtggcagatactattcaacatttctttacaaaa
tcaaacgccttaaaaccctctacagatagtgtactatcgattcagaatgttgatgatttt
ctccaagaactttcaaaatttacaaaagaagatgaacaaatatatcatttcaagaaattt
gttaaaaagtgtactgtaaatgatataaaaatgctaataagactaatcaaaggtgattta
agaattaacgctgggccaaaacatattctagaaggtgtgcatccagatgcttataatatt
tttcgaacttctcgtgatcttgacatggtacttaatagagtattaccccaaactaatgat
gtaaaacataaagatgctttccaaaaaaatgttcaagccaaattgacccttatgactcct
gttttaccaatgttagctgaggcttgtaagtcggtcgaaatggctatgaagaaatgtccc
aatggcatgttttccgagattaaatatgatggagagagagtccaagttcataaaaaggga
aatgaatttaaatatttttctcgtgctctaaaacctgtgatggcccataaagtcagtcac
tttaaagattatctccctcaagcttttccaaaaggagatgatttaattttggacgcagaa
gttttaatggtagatgtgaagaccggtaaaccattaccatttggtactttgggaatacac
aagcaatctgaatttaaagatgcccaagtttgcctttatatttttgattgcctatattat
aatggtgaaattttaatggacaagcctatcagaaaacgacgaaaattactgcatgatatt
atggttgaagttaaaaatcacgttatgttttctgagcaagaattaatcaataagcctgct
gatttagcaaatatgattgcaaaagtactacaattgggtttagaagggcttgtattaaag
gatctggaatcaatttatgaacctggcaagagacattggttaaaagtaaagaaagactat
ttgtttgatggggcaatggcagactcagcagatcttgtggtacttggagcttggtttggt
accggaaaaaagggaggtatgatgtctgtttttctaatgggttgtttggacaaacatcgc
aataagtgggtcactgtgactaaagttcatacaggacatgatgatagtactttggaaaga
ttacaaaaagagcttaatcctctaatggtaaagatatcacaggattattcgagggtgccg
tcatggttggactgtaataagggcatggtaccagatttcgtggcattagatccccaaaaa
caacctgtttgggaaattacaggtactgaattaacaaaggcgaatttacatacagctgat
ggaatatcagttagatttcctagagtaacaagaatacgtgatgacaaaaattgggaatcg
gcaactaatttggaagaattaaaacatttatacaaaacatctaaagagaaaacggatgtc
tcactcttaaataaattagcagctactgcaagtgataactacgaaccaccgcctaagaaa
ttaaagaaaacaccaataaaaaaagaaattaaagctgtgaaagccgagaaaagccctatc
aaaactgggatattaaataaattctttacgaaattttcaactgtaacaagtaaaatagaa
aaagaaccaaactcggaagataagaaaataataaaacaggaggatttcgataataattcg
gaatatcttaatgatacatacaaaaatcaagatattaaaaaagagaaaacccatcagcag
acattacccgaagatcctttacccgacgtttttataaataaaagaataggtttttatcct
gattttataagtataccggaaaaagagcgaagatattttgaaagacattggatagcatat
ggaggtactgtggttaaagcgatcaaagcaatggacgtagactacgttgttcataataat
gatacgatcgatttcaagaaaatgacaaaattaaagaataagttacccaccggcgttaga
catgtaaccaaaagttggttgataaaatgtatcaataatgtagagctttgtgaaacaata
aattatactgtgttagttgaaccttaa

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