Melitaea cinxia (Glanville fritillary): 123657865
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Entry
123657865 CDS
T09237
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin
KO
K16469
rootletin
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcix03037
]
123657865
Cilium and associated proteins [BR:
mcix03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123657865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
CENP-F_leu_zip
ERM_helical
ATG16
USHBP1_PDZ-bd
DUF6746
Leu_zip
Taxilin
TPR_MLP1_2
SHE3
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
123657865
NCBI-ProteinID:
XP_045449318
LinkDB
All DBs
Position
11:14798364..14827775
Genome browser
AA seq
1907 aa
AA seq
DB search
MDSPVGSISSDLRRQNEELRARLAGENADHKRRLDAYRRAQQGQAALVSRLQAKVLQYKQ
RCAELENQMLEATPRSETSYKPSGSKSIALPSPAALPASDSRQDERIGDLETALRRLDEE
KRKCDKLVSQNNLLRDQLEESHQLNEALTNDLQKLTNDWEALRDEMTIKEDEWKDEEQAF
NDYYSNEHNRLLNLWREVVSVKRFFSELQSSTERDLYKVKNDIDSAARELVGTISGYAIN
TYASQGTKPEAQQNATTSTAVENLRSELHNVTTQRDSAIAELRERDARIQRLLGELQGLE
ERCDTAETMCSDANIMRSALEEVARVLIKDSEPDSAPQHLHLSERXTKQXSITPATGGAL
FAESTLSALQAALHNYRIRVHELQVKLQNAREQLGTSRKQCEVADSSIITLESKVQDLQG
KLDQANADLNQLLQEKESMQKTLEALRIDKNNLERNRVEINAMVESLTSDYEKLQKINAR
LEKNIETLEEEKRTLNTEVDHLKHEAANRESVLRAEEERSSRLRSELVSVREDLHKTALA
RDLLDQQKLEADAVLTQLEKNRSDLEIELERILLERGDLQDLVDKLQSLVRNLEADKKKL
QEDVKNLEDEKSSLSNQSSEQQGDLNSLRKELLAAEQNRMELEADKASLYEKIKFLEGER
EKVEMELRQVMRERGELSSQLTAMARKKDALNEEIIRLQQRLEQANETIGRLNRSLDDHV
KDAEEKQILIDNLDKDKQHLQEQLAGVRSEKDALEAVLFDTANMLEDAESKRSKLEQDLQ
ECLVQQENYKGQISRLTKDLENSERKLRETRNSMSQQSGKKEAEYQQVITNLNRTTNENI
TKLKEEKEQLRQSLEQKLSQTIAALTSEKDTLEAGAREREKKLLALRDQLILQHDEALLR
AENDKQQALLMAHQEHQALLERLEDAKRSLCCEQNKLERVRRDAQARSEQDRNNINQLKD
DLATLKTRLEEAKAAAEDECARLGNRIKELHLEKEAVTRECVEARAQLALAEDRRDALHV
QLQDALRRMKELENESDSLRKELTDVRRQLSNCTAERDKYNSACRELRDHVKRSELERRE
AARARDEAYHKIAGLEENRTSLELELSRVQTMLKESESGGEHAERSLRATEAQLKRERAA
LEQAQHDIKELQSRLQNENEERERCAGDAATAKRHGAELEAMLGAARADLAAARQRAAEL
DEACRARDQELVLRLEDCRSKERRLEELKHNLEVCLADATQQIQELKTRLGGCEGRCRGV
EAALAHSEAARRDAEARLSSVALALRRVCGVQPDGSVQPQARRRLASPARRYSPHRGRDH
SEDRNEIIDVDPELIKKGIRNLMHEVCQIEREKDDYKSQLTVLKKQLKDVTEQQGKGEGR
LQSLNNNLRGLQEEKSRLQTALGQKEAQMTALNESVQTKTVEISNLRDKITSLEAALSST
SEDKVQNENKSESLRVQLAERVQEVGQLREALAAAEGRAARLDVRRAQLEGDVQRAAVAA
RDRDQALKKLQERCEGYQRTIASLEDRCTSLKGTVEQLSTSLQKAATAESELRAELSKTQ
RLLNEAKNNEGNAMDKLRQLQKNVANCENERRVLTEKLESAKSALSELKRLNCTLEDQVH
RLTNQLANIEAQRADLESQLRMTTWDGKESNDSGELERELHTLQRERSELKAKNDALQDT
VRKLEAERRMTRPSVLRSKSHDRTEKSVYYSSDLDSGADSTKDSRGYKDYKDYKEVPCKD
KSYSSDFSLLELENRELKMKIRRLEKELADKESELAMARNRYFSDKSSCSGNRQDIEQYR
QAALQAERLLEAREASHRQQIMRLENQLSSLRAQLSAELRRRAAYVSRSGRAARDVQRLR
AALGDSLRAVEQDPALDSYTLEHEARKLDNTLTHSLPPLNDSFGSSK
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggattcaccggtaggtagtatcagcagcgacctgcgacggcagaacgaagagctccga
gcacgtctggctggcgagaacgctgaccataagcgaagacttgatgcttatcgccgggcg
cagcagggccaagctgctttagtatccaggcttcaagcgaaggtacttcaatacaagcaa
cgatgcgccgagttagagaatcaaatgctagaagcaacgcctcgcagcgagacaagctac
aagccaagtggcagcaaaagtatcgcgctcccgtcgcctgccgctctgcccgcgtctgac
tcgcgtcaggatgagagaatcggagatctggaaaccgcattacggcgactcgatgaggag
aaacgcaaatgtgacaagttggtgtctcaaaacaacttattacgagatcagttagaggaa
tcccaccagctcaacgaggctctcacaaatgatctgcagaagcttacaaacgactgggag
gctttgagggacgagatgactatcaaggaagatgagtggaaggatgaagaacaagccttc
aacgactactactcaaatgaacacaatcgtctcctcaatctttggcgtgaagtggtttct
gttaagcgtttcttctcggagcttcagagcagtactgagcgtgacttgtacaaagttaag
aatgacattgactctgctgcgagggaacttgttggaacaatcagtggatatgctattaat
acttatgcatctcagggtactaagccagaagctcagcagaatgcaacaacaagtacagca
gtggaaaacctccgttccgaattgcacaatgtaacaactcaacgagattcagcaattgca
gaattacgggagcgagacgcgcgcatacaacgcttgttgggagagttgcaaggactggag
gaacgctgcgatactgctgaaacgatgtgctcagacgcgaatataatgcggtctgcttta
gaagaggtcgctcgtgtgctgataaaggactccgagcctgatagtgcaccgcaacattta
catctatctgaaaggtaaactaagcaataaagtattacgccggctaccggtggtgcgctg
ttcgccgagagcacgctgtcagcgctgcaggcggcgctgcacaactaccgcatacgagtg
cacgagctgcaggttaagcttcaaaacgcaagagaacagctgggaacaagcaggaaacaa
tgtgaagtggctgattccagcatcatcactttggaaagcaaggttcaagatttgcaagga
aaattagaccaagccaacgcagatcttaatcaactgctccaagaaaaggaatctatgcag
aagactctagaagctttgaggatcgataagaacaatcttgagagaaatcgagtcgaaatt
aatgcaatggttgaatcactaacttcagactacgagaaactgcagaagatcaacgctcgt
ttagagaagaatatcgaaactcttgaagaggagaagcgcactttgaacaccgaagtagac
catctgaaacacgaagccgctaatagggagtctgttttgagggcggaggaagagcggtcg
tcccgcctgcgctcggagctggtgtcggtgcgcgaggacctgcacaagacggcgctggcg
cgggacctgctggaccagcagaagctggaggccgatgcggtgctcacgcagttggagaag
aacaggagtgatctagaaatagagttggaaagaatattgctagaacgcggcgacctgcaa
gacctcgtggacaagttgcagtcgttggtgcgtaacttggaggcagacaagaagaagtta
caggaagacgttaaaaacttagaagacgaaaaatcgtccctctcaaatcaatcatcagaa
caacaaggtgaccttaactccttacgcaaggaattgctcgctgcagaacagaatagaatg
gagttagaggcagacaaagcttctctttacgagaagatcaagttccttgaaggggagaga
gagaaggttgagatggagttgagacaagttatgagagaacgtggtgaactcagttctcaa
ttgacagcaatggctcggaagaaggacgcacttaacgaggagattatacgtctgcaacag
agacttgaacaagctaacgaaactattgggagactgaacaggtctctggatgatcatgtc
aaagatgctgaagagaaacagatcctcatagacaatctagataaagacaaacagcatcta
caagagcaactcgccggtgttaggtcagagaaggatgcattagaagcggtgttgtttgac
acggccaacatgttggaagacgccgagagtaaacggagcaagttggaacaagacctgcaa
gagtgtttagttcaacaggagaattataaaggtcaaatctctcgcctaaccaaagacctt
gagaacagcgaaaggaaacttcgagaaacaaggaacagtatgtcccaacagtccgggaaa
aaagaggccgaatatcaacaagttatcacaaatcttaatcgaactaccaacgaaaacata
actaagctcaaggaagagaaggaacaattacgccaatcgttagaacagaaactaagtcag
acaatagcggcgctgacgagtgagaaggacacattggaagcgggtgcgagggagagagag
aaaaaattattagcactgcgcgatcagctgatcttacaacacgatgaagctttgttgaga
gctgagaacgataaacagcaagctttacttatggctcatcaagaacaccaagctctattg
gaacgtctcgaagatgcaaaacgctcgctctgctgcgaacagaacaagttggaacgtgtt
cgcagagacgcacaggcgaggtccgagcaagacaggaataatataaatcagcttaaggac
gatctggccaccttgaagactaggttggaagaggcaaaagcggccgccgaagacgagtgc
gcgcgtctaggaaaccggatcaaagagcttcacctagagaaggaagcagtgacccgcgag
tgcgtggaggcgcgcgcgcagctggcgctggcggaggaccggcgcgacgcgctgcacgtg
cagctgcaggacgcgctgcggaggatgaaggagctggagaacgagtcagacagtctgcgc
aaggagctgacagacgtgcggcgacaactgtccaactgcacggcggagcgcgacaagtac
aacagcgcgtgtcgcgagctccgcgatcacgtgaaacggtccgaactggagcggagggag
gcggcgcgggcgagggacgaggcctaccataagattgcgggtttggaagagaaccgcacg
tctctcgaattggagctctcccgtgttcagacgatgctcaaggagtcggagagtggtgga
gagcacgcggagagatctctccgcgcaacagaggctcagctgaagagagaacgcgccgcc
ttggagcaggcgcagcatgacatcaaggaacttcaatctaggcttcagaacgagaacgag
gaacgcgaacgttgtgcgggcgacgcggctactgctaaacgacacggcgcagagttagag
gcgatgttgggcgccgctcgcgccgacctcgccgccgcgcgccagcgggccgccgagttg
gacgaggcgtgccgcgcccgggaccaggaattagtgctacgccttgaagactgtcgatcc
aaagagcgtcggttggaagaactgaaacataacttagaagtatgtcttgctgatgcgaca
caacagatacaagaattaaagacgcggttgggaggttgtgaaggccgctgccgcggcgtg
gaggcggcgctggcgcacagcgaggcggcgcggcgcgatgcggaggcgcgcctgtcgtcc
gtggcgctggcgctgcgccgcgtgtgcggcgtgcagcccgacggcagcgtgcagccgcag
gcgcgccgccgcctcgccagccccgcgcgccgctacagcccgcacagaggtcgtgatcat
tcagaagaccgtaacgaaattatcgacgttgatcccgaattgatcaaaaagggcattcgt
aatttgatgcatgaggtgtgtcaaattgagagggaaaaggatgattacaaatcgcaattg
actgtcctgaaaaaacagttgaaggatgtcacagaacagcagggcaagggtgaaggtcgt
cttcagtctctcaacaataacttgcgtggtttacaggaggaaaaatctcgcttacagact
gctctcggacaaaaggaagctcaaatgaccgccttgaatgagtcggtgcaaacaaagaca
gtggaaattagcaatttgagggacaagataacgagcctcgaagctgctctgagttctaca
agtgaagataaagtacaaaatgagaacaaatccgaaagtctacgagttcaattagccgag
cgtgtgcaagaagttggtcagctacgtgaagcccttgcagcagctgaaggtcgagcggca
cgactggacgtgcgtcgcgcacaactggagggcgacgtgcagcgcgcggccgtggcggca
agagaccgcgaccaggcgctcaagaaactccaagagcgatgcgaaggttaccaacgtact
atcgcttcgttagaagacagatgtacgtctctaaagggcacagtggaacagctctcaact
tccctacaaaaggcagccacagcagaaagtgagctcagagcggaactgagcaaaactcaa
agactgctcaatgaggctaagaataacgaaggcaatgctatggacaagttgcggcaatta
cagaagaatgttgcaaattgcgagaacgaacgtcgcgttctgactgagaagttggagagc
gctaagtcagcgctgagtgagctgaagcgcctcaactgtaccttagaagaccaggtgcat
cgccttactaaccaactggcaaatattgaagcacagagagctgacttagaatcccaacta
cgtatgactacgtgggacggtaaggagagcaatgacagcggtgaactcgaacgcgaatta
cacacattacagcgtgaaagatcagaattgaaagcaaagaatgacgcgttacaagatact
gtcagaaaattagaggccgaaaggcgtatgacaagaccgtcggtgcttcgtagtaagagt
catgacagaaccgagaagagtgtttattattcgtctgatttggattctggtgcagattca
acaaaagattcacggggctacaaagattacaaggactacaaggaagtgccttgcaaagac
aagtcttacagctctgatttcagtcttttagagttagagaatagagaactgaaaatgaaa
atcaggcgtcttgagaaggaacttgctgataaagagtcagaactagccatggctcgtaac
cgctacttcagcgacaagtcctcgtgtagcggcaatagacaagacatagagcagtaccgt
caggcggcgctacaggccgagaggctcctggaggcgcgggaggcgagtcatagacaacag
attatgcgtcttgagaatcagctgtcgtcgctgcgcgcgcagctgtcggcggagctgcgg
cggcgcgcggcgtacgtgtcgcgcagcggccgcgcggcgcgcgacgtgcagcgcctgcgc
gccgcgctcggggactcgctgcgcgccgtcgagcaggatccagcgctagattcttacact
ttggaacacgaagccaggaagctagacaacaccctgacgcacagtctcccgcctctcaat
gacagctttggttcatcaaaataa
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