Melitaea cinxia (Glanville fritillary): 123657900
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Entry
123657900 CDS
T09237
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123657900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123657900
03036 Chromosome and associated proteins [BR:
mcix03036
]
123657900
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123657900
Coactivators
SAGA/TFTC/STAGA complex
123657900
Chromosome and associated proteins [BR:
mcix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123657900
STAGA complex
123657900
TFTC complex
123657900
SAGA complex
123657900
SLIK complex
123657900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
TFIID_NTD2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR41
WD_LRWD1
Beta-prop_HPS5
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
123657900
NCBI-ProteinID:
XP_045449347
LinkDB
All DBs
Position
11:7266947..7278508
Genome browser
AA seq
651 aa
AA seq
DB search
MKRTRNDAVKAAVTSYLERRNYPDIDFFNNNSSSRSAEEMAVSTIIQCEASRANSILFSC
INNDPGHYDVQYTRLVNFIKDIKSENVKNELLGLLTPLLCHLYLEMLRGGHGGAAQMFLK
RQSATLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLDDI
GTVYTLQEIESRPTIAAFRSCKYDIYLSQDALNILKAYLAKHGHVLLIQVFQTWFHIDIN
NENKKNTEDDEEQIENERNILKTNCAEKVNNINDIFSKCNGHTEYQSVDKDLRELQDAIK
GVRETTAPLKLYKIAAPDTHLICAKTDQYCNVLCGGFDNSEVRLWHLGQNNVKKRINRNI
SEIELACCIPLEPETQLDTTFQIGTGIPLRGHSGPIQAVSILSKEEIVLSASHDSSMRAW
RLSDYSCASIYRGHNYPIWCMDVSKNGLFIVTGSHDKTAKLWSLDRTFTVRVFVGHTSDV
TCVKFHPNEAYLATGGADRSVRLWSVCDARLVRMLLGHRAAVRALAFAPAGTHLASAGDD
KKIKVWDLAACNCVHEYRGHHGKVTSLDWSAVAKPSLCNRVSVDPNDPNTENSTLCSAGM
DGIVKVMWDTNMKNKQVSNQDITTSTYNTKCSHLVDVQVQPDWILAIGSKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaactcgaaacgatgcagttaaggctgctgttacttcctacttagaaaggcga
aattatccagatattgatttcttcaataacaattcttcaagtcgtagtgctgaagaaatg
gcagtgtcaactatcatacaatgtgaagccagtcgagctaattctattttgttttcatgt
ataaacaatgatcctggacactatgatgttcaatacacaaggcttgttaatttcataaag
gatataaagtctgagaatgtgaaaaatgagttactaggcttactgactccacttttgtgc
cacttgtacctagaaatgttgcgtggtggtcatggaggggcagctcaaatgtttttaaaa
aggcagtctgcaacccttccacaaaaagacttatcttatcatcagcctatagatggaaac
ttgccatcagctctctatcgtccaaatagtctggaacagttgttcaactcattacaaaat
ggaactatcgacaatgaaacaccagagaaagattatatgaaccaattactagatgatatt
ggaacagtttatacattacaagaaattgaatctcgcccaactattgcagcctttaggtct
tgtaaatatgatatttatttatcacaagatgctttaaatatcctaaaggcatatttagct
aaacatggccatgtcttactaattcaagtttttcaaacttggtttcatatagacataaat
aatgaaaataagaaaaatactgaagatgatgaagaacagatagaaaatgaaagaaatata
ctgaaaacaaattgtgctgaaaaagtaaataatattaatgatatattctctaaatgcaat
ggccatacagaatatcagtctgttgacaaggacttgagagaattacaagatgcaatcaaa
ggtgtaagagaaactactgcacctctcaaactgtataaaatagctgctccagatacacac
ctaatatgtgcaaaaactgatcaatactgcaatgtgttatgtggaggatttgataactca
gaagtaagactgtggcatctcggacaaaacaatgtaaagaaaagaattaaccgaaatata
tcagagattgaattggcttgctgcattccacttgaacctgaaacacagttggacacaact
ttccaaataggtacaggaataccattgcgaggtcactctggtcccatacaagctgttagt
attctctcgaaagaagaaatagtactttcagcatcacatgacagcagcatgagagcttgg
agattatcagattactcgtgtgcctctatttatagaggtcataattatcccatctggtgt
atggatgtgtcaaaaaatggtctgtttatagtaacaggatctcatgacaaaacggcaaaa
ttatggtcactggatcgaacatttactgtaagagtatttgttggacatacgtctgatgta
acgtgcgtgaagttccacccgaacgaggcgtacctggcgacgggcggcgcggaccgcagc
gtgcggctgtggagcgtgtgcgacgcgcggctcgtgcgcatgctgctggggcaccgcgcc
gccgtgcgcgcgctcgccttcgcgcccgccggcacgcacctcgctagcgccggggacgat
aagaagataaaagtatgggatttggctgcatgtaattgtgttcatgaatacagaggacac
cacggaaaagtcacatccttagattggtctgcagttgcaaaacccagcttatgtaacaga
gtttcagtagatccaaatgacccaaatacagaaaattctacactgtgttcagctgggatg
gatggaattgtcaaagttatgtgggacactaatatgaaaaataagcaagtatcgaaccaa
gatattaccacgtctacctacaatactaaatgttcacatttagtcgatgtgcaagtacaa
cctgattggatattagcaataggaagtaagaaataa
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