Melitaea cinxia (Glanville fritillary): 123657934
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Entry
123657934 CDS
T09237
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123657934
03009 Ribosome biogenesis [BR:
mcix03009
]
123657934
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123657934
Spliceosome [BR:
mcix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123657934
Ribosome biogenesis [BR:
mcix03009
]
Eukaryotic type
90S particles
Helicases
123657934
Pre-60S particles
123657934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Helicase_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
123657934
NCBI-ProteinID:
XP_045449374
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All DBs
Position
11:9211051..9214913
Genome browser
AA seq
461 aa
AA seq
DB search
MNDEEINHYNFNMLEGKIDSRLLKSLSTMGIEKPTPIQAKTLPHILIGEDIIGAAKTGSG
KTLAFLVPVVDKLINLGFSKNKGVGCLIISPTRELALQTNEVLKKLLVNIPLTHSLIIGG
EKKLKEVVLLQKGVNIIVGTPGRILDHLENTRNFSYKNLKCLVLDEADKLLEAGFEKHIV
GIIKKLPSNRQTVLFSATIDDKIESLAKLALKNNPKVIAVKDYKQSTVTGLQQGYCICPV
ENRICWLYKMLKKSKKKKVMVFFSSCKSVDFHYEFFKTHCKASVLSIHGKQSQPRRKNCY
NTFVNADKGTLFCTDVAARGLDIPSVDWIVQYDPPTDMKEYIHRVGRTARGLNSSGNAVI
LLRPEEEDFIEYLKREKVYLDKYNFGDPPVEVQKMLEDLIKKDGTMKVLARKAYLSFLRC
YNKHPLNKVFNIKKLDLKAAAKAFGFIEQPHVDFLKARKRI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaagagataaatcattataacttcaacatgttggaaggtaaaatagacagt
cgcttattaaaaagcttatcaacaatgggtatagaaaaaccaacacccatccaggctaaa
accttgcctcatatactgatcggcgaagatataataggagctgcaaagactggtagtggt
aaaacattagcatttttagtaccagttgtagacaaattaattaatttaggattttctaaa
aataaaggtgttggttgtttgattatttcacctacaagagaattggcacttcaaaccaat
gaggttttaaagaaacttctagtaaatattccattaactcatagcttaatcattggtggt
gagaagaagttgaaagaagtagtactattgcaaaaaggtgttaatataatagttgggaca
ccgggtcgtatcttagatcatttagaaaatacaaggaactttagctataaaaatctaaag
tgcctcgtcttagacgaagctgacaaattactcgaagctggttttgagaagcatatagtt
ggaattattaaaaaacttccaagtaatagacaaactgtcttgtttagtgcgacaattgat
gataaaatagaaagcttagcaaagctagcattaaagaataatccaaaagtaatagctgta
aaagattataaacagtcaactgtaacaggtctgcagcaagggtattgcatttgtccagtc
gaaaatagaatatgttggttatataaaatgctcaaaaagagtaaaaagaaaaaagtaatg
gtgtttttttcttcttgtaaatctgttgattttcattatgaattcttcaaaacacattgt
aaagcatcagtactaagtatacatggtaagcaaagtcaaccaagaaggaaaaattgctat
aacacatttgttaatgctgacaaggggactctattttgtactgatgtagctgcaaggggc
ttggatattccatctgttgattggattgttcaatatgatccacctacagacatgaaagag
tacatacacagagttggacgtacagcaagagggttgaatagcagtggcaatgcagtcata
ttattaagacctgaagaagaagactttattgaatacttgaagagggaaaaagtttattta
gataaatataattttggagatccacccgtagaagtgcaaaaaatgcttgaagatctcata
aaaaaagatggaactatgaaagttttagcacggaaagcgtatctttcatttttgagatgt
tataataaacatccacttaacaaagtgttcaatattaaaaaactggacttaaaagcagca
gctaaagcttttggctttattgagcaaccacatgttgatttcttaaaagctaggaaaagg
atttga
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