Melitaea cinxia (Glanville fritillary): 123657936
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Entry
123657936 CDS
T09237
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123657936
03009 Ribosome biogenesis [BR:
mcix03009
]
123657936
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123657936
Spliceosome [BR:
mcix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123657936
Ribosome biogenesis [BR:
mcix03009
]
Eukaryotic type
90S particles
Helicases
123657936
Pre-60S particles
123657936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_30
AAA_22
Peptidase_M78
Motif
Other DBs
NCBI-GeneID:
123657936
NCBI-ProteinID:
XP_045449377
LinkDB
All DBs
Position
11:complement(9247863..9251668)
Genome browser
AA seq
476 aa
AA seq
DB search
MGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAFLIPAIELIYKLKFKPRNGTGVII
LSPTRELSMQTFGVLMELMKYHHHTYGLVMGGSNRTTEAQKLSKGINILVATPGRLLDHL
QNTPDFLYKNLQCLIIDEADRLLEIGFEEEVKQIIRLLPSKXRQTMLFSATQTKKTEQLT
ALAIKHEPVYVGVDDHREQATVDSLEQGYIVCPSEKRMMVLFTFLKKNRKKKVMVFLSTC
MSVKYHHELFNYIDLPVMSIHGKQQQSKRTTTFFQFCNAESGILLCTDVAARGLDIPAVD
WIIQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPEELGFLRYLKQSKVTLNEFEFSW
NKVADIQLQLEKLISKNYFLNQSAKEAFKSYLRAYDSHHLKTIFDIDTIDLAKVAKSFGF
TVPPAVELKVTSKGPTQKRKGGGGFGYFKTLNKPNHKKAEKTKIYRQKGNNKKSIS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcacaaccatgactgaaatacaggctaaagcaataccacctttactggaagga
agagatctcgtaggagcagctagaacaggctcagggaagacactcgcttttctcatacca
gctatcgaattgatatacaaattgaaattcaagcctagaaatggcactggagtcattatt
ctttccccaactagagaactgtcaatgcaaacattcggagttttgatggaattgatgaaa
tatcatcatcacacatatggcttagttatgggaggttcaaacagaaccactgaagctcaa
aagctttcaaaaggcatcaatatattagtagcaacaccagggcgtctactagaccatttg
caaaacactccagacttcctatataaaaatttgcagtgtcttataattgatgaggctgat
agattactagaaattggttttgaagaagaagtaaaacaaattattagattgctaccgagt
aagtaacgacagaccatgctttttagtgctacacagactaaaaagaccgaacaattgacg
gctttggcaataaaacacgagcctgtgtatgtgggggttgatgaccacagagaacaagct
accgtggactctttagaacaaggatatattgtctgtccctccgaaaaacgaatgatggtt
ctattcacattccttaaaaagaatagaaaaaagaaggttatggtgtttttgtcaacatgt
atgtctgtgaagtatcaccatgaactgttcaactacattgatctgcctgtcatgtctata
catggtaaacaacagcaatcaaaacgaactacaactttcttccaattctgtaatgcagag
agtggtatcctactttgcacagacgtagccgcaagaggtttagatatcccagcagtggat
tggattatacagtacgatccacctgacgatccaaaggaatatattcatagagtaggtaga
actgcgagaggtctgggaactagtggtcacgctctgctgttcttgcgacctgaagagttg
ggctttcttaggtacttaaaacagtctaaggtcacattaaatgaatttgagttctcttgg
aacaaagttgctgatattcagttacagttggaaaaattgatttccaaaaactatttctta
aatcaatcggctaaagaagcattcaaaagttacctgcgggcttacgattctcatcaccta
aaaactatttttgatattgacactatagacttagcaaaagttgctaaatcattcggcttc
actgtaccaccagctgttgaattaaaggttacttctaaaggtcccacgcagaaaaggaaa
ggaggaggcggatttggatatttcaaaacattaaacaaaccaaatcataagaaagcagag
aaaactaaaatttatagacaaaaaggaaacaataaaaaatcaataagctaa
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