Melitaea cinxia (Glanville fritillary): 123658578
Help
Entry
123658578 CDS
T09237
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123658578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcix03400
]
123658578
DNA repair and recombination proteins [BR:
mcix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123658578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
MnmE_helical
DUF2452
Motif
Other DBs
NCBI-GeneID:
123658578
NCBI-ProteinID:
XP_045449909
LinkDB
All DBs
Position
12:9140446..9177376
Genome browser
AA seq
918 aa
AA seq
DB search
MSSLQPIHALNLDSVQQQAFIKYFHSLPDKPPTTVRIFDRNDYYSVHGIDATTAAREVFS
SISNIKKMGIEPNRLDYLVLSKGNFEILIRKLLLVRRYRVEIYVPEGSVKACDWSVKYKG
SPGYLSQLEEVLGEGLGSSNERAPCLMAVNIKSDPVTRSRLLGVACITSGEYLLSVSEFT
DDDLLTELETITVQMAPSECLIALAENDDYKALKKVMERANVTLTKVKKGEFSTEGLNQD
LNRLLKFKEGQQQDANAFPELRKQVAMTSLAATIRYTSLLNDNTNFGRFRITTIQPDCFL
HLDSAALTALNVLPELGDTSNAPSRSLYGLLDRCRTQHGKRLLAQWLRQPLRDINLINER
LDIVELLMENSQLRLQLHEDHLRRIPDLQLLARRLTRKKANLQDCYRIYQAINRLPSLLQ
CLGDADNATLHSSLAEPISELNNDLDKYQQMIEATVDMDAIDRGDFLVKPSFDEQLQNLA
EQLEKLQSSAEKELNKAARDLGLDAGKSIKLESNAQNGFNFRVTLKDEQSIRGNKKYVII
DAVKGGARFKTNALESITEDYLQTKTAYEKEQDKVVTEIIGIAAGYSECLFCLSHILSRL
DVLVSFAVAATTAPLPYCRPIVTEDLDEFILKDVRHPCLEVQEGVSYIPNDVIFKRDSCI
MHIVTGANMGGKSTWMRSCGVAALLAHAGCPVPASSATLPLLRALCARVGAADREDKGQS
TFMLEMIETAALLRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEKLATESKCFCLFATH
YHELTRLPSLHPNVIVNSHAEASVVDQQLLLLHKIAPGPATHSLGLHVAKLADLPDSIIQ
YAEQKQAQLETNLFEVEAAVDTEETSIGQKIITEFLKKCKKIHETIASDEEMLTEINKYK
QELLRSESKYVQSIISAL
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcactacaaccgattcacgcactcaacttagattccgtgcagcagcaagcattc
attaaatactttcattctttacctgataaaccaccaacaactgttagaatattcgatcgc
aatgattactacagcgttcacggcatcgatgcaacaacggcggctcgtgaagtgttctcg
tcgatttctaacattaagaagatgggcatcgaaccaaatcgacttgattatttagttctt
tctaaaggaaacttcgaaatacttataaggaagttattactggttcgtcgatatagagta
gaaatatacgttccagaaggttctgtaaaagcctgcgattggtcggtcaaatacaaaggc
tcaccgggatatttgtctcaactggaagaggttttaggagaaggtctaggttcctccaac
gaacgagctccttgtttgatggcggttaatataaagagtgatcctgtaactaggagtcgt
ctattgggtgtggcgtgtatcacatcaggggagtatttgttgtctgtatcagagtttact
gatgacgatcttctaactgaattagagactatcaccgttcaaatggctccatctgaatgt
ttaattgcacttgctgaaaatgatgactataaagctctgaaaaaagtaatggaaagagcg
aacgtgaccttgacaaaagtgaaaaaaggagagttttcaactgaaggccttaatcaagat
ttaaacagattactaaaattcaaggagggacaacaacaggacgccaacgcttttccagaa
ttaagaaaacaagttgcgatgacaagcttggcagctactatcagatacacatctctatta
aatgataacactaattttggaagatttcgcataacaacaatacaaccagattgcttttta
catctggattctgctgcactgacagctctcaatgttttaccagaattgggtgacacgagt
aacgcgccctctagaagtttatacggtcttctggatcgatgcaggacgcaacatggtaaa
cgacttttagcgcaatggctaagacagcccctccgcgatataaacttaataaacgaaaga
ctagatatcgtagaactactaatggaaaactctcagctccgcttgcaattacacgaggat
cacttaagaaggataccggacttgcaactattggcgagacgacttacaaggaaaaaggcc
aatttgcaagattgctatcgaatttatcaggctatcaacagactaccatcgttattgcaa
tgtctaggagacgccgataacgcaaccttgcattcctctctagcggaaccgatatctgaa
ctaaacaacgacctagataagtatcaacagatgatcgaggctactgtggatatggacgct
attgacagaggtgatttcctagtaaaaccatcatttgacgaacagctacaaaatttagcg
gaacaattggaaaaattacagtcttctgctgagaaggaattaaacaaagccgctcgagat
ttaggcctggatgctgggaagagtattaaacttgagagcaatgcacagaatggatttaat
tttagggtgactttaaaagatgaacaaagcattcgtggtaataaaaagtacgttataatt
gatgcagtgaaaggtggagcaagatttaaaacgaatgctttggagagtattactgaagat
tacttgcaaacgaaaacggcgtatgaaaaggaacaggacaaagttgttacggaaattatt
ggaattgcagctggatattcggaatgccttttctgtttatcacacatactgtcaagattg
gatgtactggtatcgtttgcagtagcggccacaactgcaccgttgccttattgtagacca
attgttactgaggatctcgatgaattcattttgaaagacgttcggcatccttgtttagaa
gtacaagagggagtttcttatatacccaatgatgtcatttttaaacgagactcctgcatc
atgcacatagtaactggagcaaatatgggcggtaaatcgacatggatgcgttcgtgcggc
gttgccgctctgctggctcacgccggctgcccagttcccgctagcagcgcgacgttgccg
ctcctccgcgccctgtgcgcccgcgtgggcgccgccgaccgcgaggacaagggacagagc
accttcatgctggagatgatcgagaccgcggccctactgaggacggcgactccagactcc
ctagtattggttgatgaacttggtagagggacatcaacttatgaaggctgtggaatagct
tgggcaatagcagaaaaattagccacagagagcaaatgtttctgtttattcgcgacgcat
taccacgagttgacaagactcccgagcttacatccgaatgtgatagtaaactctcacgct
gaagcctcagtggtcgatcaacaattgctcctattgcacaaaatagcgcccggaccggcg
acgcattccctcggtctacatgttgctaaattagcagatctccccgactcaataattcag
tacgctgaacaaaaacaggctcaattagaaacaaacctttttgaagtcgaagcagccgtc
gacactgaagaaacaagtataggacagaaaattattacggagtttttaaaaaagtgtaaa
aaaatacatgaaacaatagcttcagatgaagaaatgttaacagaaataaataaatacaaa
caagaacttttgcggagtgaaagtaaatatgtacaatcgataatatctgcattgtaa
DBGET
integrated database retrieval system
