Melitaea cinxia (Glanville fritillary): 123659438
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Entry
123659438 CDS
T09237
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123659438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123659438
03009 Ribosome biogenesis [BR:
mcix03009
]
123659438
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123659438
Spliceosome [BR:
mcix03041
]
Complex A
U1 snRNP components
U1 related factors
123659438
Complex B
123659438
Ribosome biogenesis [BR:
mcix03009
]
Eukaryotic type
Pre-60S particles
Helicases
123659438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123659438
NCBI-ProteinID:
XP_045450609
LinkDB
All DBs
Position
14:15380288..15396104
Genome browser
AA seq
688 aa
AA seq
DB search
MYPLYDDRRGGGRGGGRGGPRGRGMSRGGASSRGRSSDRSQERVSRFSGNSRGRDMGRGG
RGGSRGGRDNRDDFRGKFNNDQPGGGLRKIRWDNVQLTPFEKNFYVPHPNVQRRSLAEVE
AYRSQHQITVKGRDVPAPSMCFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDM
VGIAQTGSGKTLAYILPAIVHIINQPRLLRDEGPIVLVLAPTRELAQQIQQALLSMNGIT
SIEGNPNNMEIVAQEFGQSVQVRNTCIFGGAPKGPQGRMLERGVEIVIATPGRLIDFLEK
DTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQNLAEEFL
HDYIQINIGSLSLSANHNILQIVDVCEDWEKNEKLLTLLTEISSEEETKTIIFAETKRKV
DEITKTINRAGYRALAIHGDKNQQDRDYVLQQFRHARSSILVATDVAARGLDVEDVKFVI
NYDYPNNSEDYVHRIGRTGRSHNTGTAYTLFTPNNSAKAKDLLSVLQEANQVVNPKLLEL
AQCGMGFKGKYGRGRFRERDDSSSRDRGRGRGRGGSRFSGGDRGSRWDNNSNGQGNFSQG
SSGSGYSRENSYNNRSNFNNREGGGFNRDREGGSFRGRGGRGGRGGRGGYGGSGGYNQNQ
SGFNQSNQGFNSQPNSYYNMYSQPPPAN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccttgtacgacgatagacgtggtggtggtcgcggtggaggacgtgggggtcct
cgaggtcgggggatgagtcgcggaggcgcaagttcaagaggcaggtctagtgatagatct
caagagagagtctccaggttcagtggaaatagtcgcgggcgcgacatggggcgaggcggt
agaggaggcagccgcggtggacgcgacaatcgtgacgatttccgtggtaaattcaataac
gatcagcccggcggcggactgcgaaagatacgctgggacaatgtccaattgacgcccttc
gaaaagaacttttacgtcccacatcccaatgtgcaaaggaggtcattggcggaagtcgag
gcgtaccgcagtcagcaccagattacagtgaaagggcgggacgtccctgcccctagcatg
tgtttcgaggaaggtggttttcctgactacgctatgaaggagattctcaagcaaggtttt
cctaatccaacaccgattcaagcgcaaggttggccgatagccttatcaggtcgtgacatg
gtcggaatcgcgcagactgggtcaggaaagacgttagcatatattttgccggcaatcgtt
catatcatcaatcaaccgaggctattgagggatgaaggtccaattgtacttgtattagct
ccgacgagagaacttgcccagcagatacaacaggctctgctttcaatgaacgggataaca
tcaatagagggaaacccaaacaacatggaaatagtagctcaagagtttggtcagagtgta
caagtccgtaatacttgtatctttggcggggctccgaagggtccacagggaaggatgtta
gaaagaggcgtggagattgtcatcgctacgcccggacgactgattgatttcttggagaaa
gatacgacaaacctccgtcgttgtacatatttagtattagatgaagccgacagaatgttg
gatatgggcttcgagcctcagatcaggaagattattgaacaaatcagacctgaccgacaa
gtactgatgtggtctgcaacatggccaaaggaagttcagaatttagctgaagagtttctc
catgactacatccagataaacattggttctctatctttatcagccaatcacaacatctta
caaatagtggatgtctgcgaggactgggaaaagaatgagaagctcttgacgttgcttact
gaaatatcttcagaagaggaaactaagacaatcatctttgcggagactaagagaaaggtg
gatgagattacgaagaccattaaccgggcgggctatcgggctctcgccatccacggcgat
aagaaccagcaggaccgcgactacgtgctgcagcagttccgccacgcgcgctcctccatc
ctcgtcgccaccgacgtcgcggcgcgcggactcgatgtggaagacgtaaagttcgtgatc
aactacgactatccgaataattctgaggactacgtgcatcgcatcggtagaactggtcgt
tctcacaacaccggcacggcttatacactgttcacacctaataattccgctaaggccaag
gatcttctctcagttcttcaagaagccaaccaagtcgtcaacccaaagttattggaattg
gcgcaatgtggaatgggattcaagggaaaatatggtcgcggtagattccgtgaacgggat
gacagttcttctcgtgatcgtggtcggggtcgcggtagaggcggcagtcggttctctgga
ggagaccggggatcaagatgggataacaactctaacggccaaggaaacttcagccaaggt
tccagcggttctggttacagccgagagaacagttacaacaaccggtcaaacttcaacaac
agagaagggggaggttttaacagagacagggagggggggagtttcagaggccgaggtggt
agaggcggtaggggtgggagaggtggatatggcggttcagggggttataaccaaaatcaa
tctggtttcaatcaaagtaaccaaggtttcaactctcaaccaaacagttactacaatatg
tactctcaaccaccacctgctaattga
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