Melitaea cinxia (Glanville fritillary): 123659551
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Entry
123659551 CDS
T09237
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123659551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123659551
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123659551
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123659551
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123659551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCHC_2
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
123659551
NCBI-ProteinID:
XP_045450715
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Position
14:complement(15976692..15979530)
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AA seq
288 aa
AA seq
DB search
MEVIVANVDHIKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFFSQPGGCSNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPDGQSCKYMHPRFELPAPPEQTK
DQKRLPVCHYCSEVGHKASSCNKIPPDQREVAQKQEEARYRALGYVKPASDSDDMHRLQR
MIHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSNQSGQNNNNVFKKPN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgattgttgcaaatgttgatcatataaaatttgatatagactacgcattagaa
cagcagtatggagcgttaccgttaccctttcccgggatggacaaatcaacagcggctgtg
tgtgaatttttcagtcaaccgggtggttgcagcaatgggccacaatgcccctataggcac
gtgagaggtgatagaacggttgtgtgtaaacattggctacgagggctatgcaaaaagggc
gaccagtgtgaattcttgcacgaatatgacatgtccaagatgcctgaatgttatttctat
gcaaggtttaatgcatgccacaacaaagagtgtccattccttcacatagatcctgagagt
aaaattaaggactgcccgtggtatgacagaggtttctgccggcatggcccacactgtaga
cacagacatgtcagaagagtgttatgtatgaactacctagccggtttctgtcctgatggt
cagagctgcaagtacatgcatccgaggtttgaactgcccgctcctccggaacaaaccaaa
gatcagaaacgtttgcctgtctgtcattattgctcagaagttggtcataaagcttcatcg
tgtaacaagataccacctgatcaaagagaagtagctcaaaagcaagaagaagcaagatac
agagcactaggctatgtcaaaccagctagtgacagcgacgacatgcatcgactacaacgt
atgatacacaaaccattagaagaggtcacgtgtttcaagtgcggtacaaaaggacactac
gccaataagtgccctaaaggtcaccttgcattcttgtcaaatcaaagcggccagaacaat
aacaacgtgttcaagaaacctaactag
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