Melitaea cinxia (Glanville fritillary): 123659866
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Entry
123659866 CDS
T09237
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcix04147
]
123659866
00535 Proteoglycans [BR:
mcix00535
]
123659866
00536 Glycosaminoglycan binding proteins [BR:
mcix00536
]
123659866
Exosome [BR:
mcix04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123659866
Proteoglycans [BR:
mcix00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123659866
Glycosaminoglycan binding proteins [BR:
mcix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123659866
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
123659866
NCBI-ProteinID:
XP_045450987
LinkDB
All DBs
Position
14:5370071..5415011
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AA seq
918 aa
AA seq
DB search
MKIKVISVNKMAMVISQTTKVAIGGILALMILVAVLVAGAAFGWFDHKREDEDTPAKISA
RLQGRTSFVTHRAVNPDENRLPIISHSSPYVHKGGKDEIGFGEISPSGKERTDDRVSLSS
QCQCSVNDISRILETIPALVGPPGPQGPTGADGTTGVPGKTGQMGDPGPIGPSGPKGDRG
EKGDTGAPGVEGQIGPKGEPGNDGTPGFQGPPGPPGPPGAVASALMETTGLYASDRGIQG
PPGERGPMGLAGPQGERGYPGNKGERGLHGTKGDKGERGYVGLRGSHGAKGERGPPGKDG
TPGLPGAHGRPAEKGEKGARGLPGPPGTTVLGISENSITDLSQLGNLKGDRGDKGEKGEK
GSRGMEGPQGFPGTDGKPGVRGDIGPSGLPGAQGNTGLPGTKGDKGDAGPPGPVAISREE
ATIMTKGDKGETGPRGKRGHPGAPGPRGPPGLPGPPGSPGTNGHSGDIGLPGWTGPPGAP
GQPGPPGPKGEKGDSGITAADLEKVKGEKGERGYDGAQGSPGKEGPRGPPGPPGAPATSM
QYLPVPGPPGPPGPPGPPGAFTNEPSDTLTDSPGINRNEPSLGKPRDSLQILRNLNNLMQ
LRQEQFGFRDPLDPLAENFDFDDEDDGRTIVGTILFKSTESLLRLGTNSPRGTLAYVLRE
QALLLRVNKGWQYVAMGSLLEVQSPLGKGPTLTPLQSILETSSLVHNKNSGGGGPVLRLV
ALNEPHTGDLHGVSSTNYDCHRQAERAGFEGNFHAFIASRVQNIDAIVSWVDRETPVMNI
RGDMLFNSWGEMFDGSGALFTHAPKIYSFNGKNVMTDSDWPTKAVWHGATPTGEPAMDAF
CDAWHTSNPSKFGLASSLRSNKLLDQETYPCSTRLIVLCIEATPVNTVRRKKRSKYHISD
KTHHMKDIEERNETYNSL
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagtgataagtgttaacaaaatggcgatggtcatatcacaaacgactaaa
gttgcgattggcggaattttagcgttgatgatacttgttgccgttctggtcgctggagca
gcgtttggctggttcgatcataaaagagaagatgaagatacaccggcgaagatcagcgcc
agacttcaagggagaacttcttttgtcacacatcgtgctgtaaatccggatgaaaataga
ctaccaattatatcgcattcatcaccatatgttcacaaaggaggaaaagatgaaatcggt
tttggagaaattagtccatccgggaaggaacggacagacgaccgagtatcattgtcatct
caatgtcagtgcagcgtgaacgatatatctcggatcctggaaacaattcctgcattagtg
gggccccctggaccacaggggcctactggtgctgatgggaccactggtgtacctgggaaa
accggtcaaatgggagatccagggcctataggtccttcaggtcccaaaggagatcgggga
gagaaaggtgatactggagcaccaggagttgaggggcaaattggtcccaaaggagaacca
ggcaacgatggcacacccggttttcaaggaccgcctggacccccagggccccctggagct
gttgcttcagcacttatggaaacaacgggcctatatgcgagcgatcgtggaattcagggg
cccccgggtgaaagggggccaatgggacttgcagggcctcaaggcgaaagaggctatcct
gggaataaaggtgaaaggggattacatggtactaaaggcgataaaggcgaacgggggtac
gtcggcttgcgtggatcacatggtgcgaaaggggaacgcgggccacccgggaaggatgga
acacctggcttacccggagcgcacgggcgtcccgctgaaaagggtgaaaaaggtgctaga
ggactaccaggacctccaggaaccacagttcttggaatttctgaaaattcaataactgac
ctttctcaattaggtaatttgaaaggcgacagaggcgacaagggtgaaaagggagaaaag
ggcagcagaggaatggaaggcccacaaggttttcctggcacagacggtaaacctggcgtc
cgaggggacatcggaccgtctggtttaccaggagctcaaggaaatactggtctgcctgga
acaaaaggggacaaaggagacgcgggtccaccgggaccggtggctatatcacgcgaagaa
gcaactattatgacaaagggtgataagggtgaaactggtcctagaggcaaaagaggtcat
ccgggagctcctgggcctagagggcctccggggcttcccggccctcctggctcacctgga
acaaatggacattctggggacatagggttaccaggatggacgggtccgccgggcgcgcca
ggtcagcccggcccaccgggaccaaaaggtgaaaagggagactctggaatcacggcagcg
gacctcgaaaaggtaaaaggtgagaaaggcgaacgtgggtatgatggggcccaaggttct
ccagggaaagaaggaccgagaggcccacctgggccaccgggggcgccagctactagcatg
caatatcttcctgtacctggccccccagggcctcctgggcctcccgggccccctggtgct
tttaccaacgaaccgagtgacacgttgactgatagtccggggattaatagaaacgaaccg
tctttagggaaaccgagggattcgttacaaattctaagaaacttgaacaatttgatgcag
ctcaggcaagaacaatttggttttcgagatccacttgatccgctagcggaaaattttgac
tttgatgacgaagatgacgggagaacgattgttggcaccatactgtttaaatctacggag
tctttgctacggttgggaacgaacagtccaagaggaacattggcttatgtgttacgagag
caagcccttctcttacgagtcaacaagggatggcagtacgtcgccatgggatctcttctg
gaagttcagagtccgctgggaaaaggtccgactctaactccattacagagcattttggaa
acttcaagtttggttcacaacaagaactccggcggtggaggtcctgtgttgcgtttagtg
gcactaaacgaacctcacacaggtgacttgcatggcgtgagtagcactaactacgactgt
cataggcaggctgaaagagctggcttcgaaggaaacttccatgcatttattgcctcaaga
gttcaaaacatcgacgctatagtcagctgggtagatagagaaacgccagtgatgaatata
agaggtgacatgctgttcaactcgtggggagagatgtttgacggatcaggtgcactgttc
acgcatgcgcctaagatttacagcttcaatggcaaaaatgtgatgacagattctgattgg
cctacaaaagcagtatggcacggtgccactcctacgggcgagccggccatggatgcgttc
tgtgacgcgtggcacacaagcaatcctagcaagttcggacttgcctcctcactgcggtct
aacaagttacttgaccaagaaacatatccgtgcagtacgagattaatcgtgctgtgtatt
gaagctacaccggtgaatacagttagaagaaaaaaacgttcaaaatatcacatatccgat
aaaacgcatcacatgaaagacatcgaagaacgaaatgaaacatataattctttatag
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