Melitaea cinxia (Glanville fritillary): 123660730
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Entry
123660730 CDS
T09237
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123660730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123660730
03012 Translation factors [BR:
mcix03012
]
123660730
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123660730
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123660730
Translation factors [BR:
mcix03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123660730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
nSTAND3
AAA_19
ResIII
AAA_11
HA2_C
Cas3-like_C_2
AAA_22
ATPase_2
RsgA_GTPase
Rad17
ABC_tran
PhoH
NACHT
DUF2214
AAA_23
Motif
Other DBs
NCBI-GeneID:
123660730
NCBI-ProteinID:
XP_045451735
LinkDB
All DBs
Position
15:complement(9755709..9765391)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSRDFNNWTRPRRPSGRNWSSQNNRPRHPPGLRGVEIGMYYRGLQKKKAKKDVVINLKIP
DAVMTALDNNLRAIVKIATSRNISLPPMKNFDSFKNNTHIKDGSNKEEKINVKYELSDSC
EAGPSQDLDFIPIKQEEEDDYKPDPTICPLRPSSNYKYGYNDIITGTFNDKLEECIAKGI
NINFVNAETEKVNIALCSEYEDMVQSNGYKSMMKFREKLPAYFKANEILEVIEKNQVIVI
SGETGCGKSTQVPQIILDYAIKAKRGANVKILVTQPRRIAASSLAMRVSKERGEKLGNSV
GYAVRLETVEERPRGSIKFCTTGILLAELEVNQSLSNYSHIILDEVHERDVHVDLSMCML
KQVLTKRKDLKLILMSATLDAESLSSYFDNCPLMHIEGLAYPVKDIYLEEILEITKYNLP
PEKAKPEQPKWMMYRNKGSANVMEKNIKYRAEINKWLESRKRDLSSNVYKTLQDSRIEDI
NLDLIVELLIHICKGKPGAILVFLPGIGEITKLIKLLYENNFFIPYNFEIYPLHSKLPTL
DQYKIFERPEEHIRKIIIATNIAETSITIDDIVYVVDCGKIKISGLNVEQNITTLQTEWV
SQANLRQRRGRAGRCQPGICYHLLTTYRAEQIPERLLPELQRSNLLEPVLMIKKLRLGMA
KDALKLVPSPPAETTIQWAVKHLQMCGALDDGETLTPLGWHLARLPVHPAAGKLVLFGAL
FGCLDRAASVAAVWGFKDPFQFVIGKERKIDITKRNLALEEPSDHIAISEAILKWEKCSP
SSRRSFAYDNFLSNNTLELLSDMKKQLAKELRQMGFLKQGNIHSVWENRNANNLSLFKAI
VAASLYPNVAFVKWSNLNKRHKAPKFSVFSPEDGKLSIHPSSVMSGLRGANPCKNPGVNW
VVYWLKQRTSELYLLEVTFIYTLPLLFFGEFAVTDDVESPQNCLLSISNIKVRCNRDSAN
VFMELRSLLDKVLASKITDSSTQSLYYNEFQERVLNAVIRLITAEDEKTMYLGDDFSDSD
NSES
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgattttaataattggaccagacctaggagaccaagcggacggaattggagt
agtcaaaataatagaccacgacatccgcctggtctacgaggcgttgaaattggaatgtat
tacagaggactacaaaagaaaaaagcgaaaaaagacgttgtgataaatttaaaaatcccc
gacgcagttatgacagctcttgacaacaaccttcgagccatagtgaaaattgctactagt
cgaaatatttctttacctcctatgaagaattttgatagttttaaaaacaatactcatata
aaagatggtagtaataaagaggagaaaattaatgtaaaatatgaattgagtgattcttgt
gaagccggtccttctcaagatcttgattttattccaataaagcaagaggaagaagatgac
tataaacctgacccaacaatttgtccattaagaccttcgagcaattacaaatatggctat
aatgatattataacagggacatttaatgacaaattagaagaatgtatagcaaaaggcatt
aatataaattttgtaaatgcagaaactgaaaaagtaaatatagctttatgtagtgaatat
gaagatatggtacaaagtaacggttataaaagcatgatgaagtttagagaaaaattacca
gcatattttaaagctaatgaaattttggaggtgattgaaaagaatcaagtaattgtcatt
agtggggagacaggctgtggcaagtcaacacaagtaccacaaattattttagattatgca
ataaaggccaaaagaggagctaatgtaaaaattttagttactcaaccaagacgtattgct
gcctcttctttggctatgagagtttctaaagagagaggggagaagcttggtaattctgtt
ggttatgctgtgagattagaaacagttgaagaaagacctcgtggaagcataaagttctgt
accactggtatattattagcggagttggaagttaatcaaagcttatccaattatagccac
attatcttagatgaggttcacgaaagagatgtccatgtagacttgtctatgtgtatgtta
aaacaagttctaacaaagcgaaaagatttaaaactaattcttatgagtgcaactctagat
gcagaaagtctgtcgagttattttgataattgtcctctgatgcatatagaaggtctggca
tacccagttaaagatatttatttggaagaaatattggaaataacaaagtacaatttgcca
ccagaaaaagctaagccagaacaacctaaatggatgatgtataggaataagggaagtgct
aatgtaatggaaaagaacatcaaataccgagctgaaattaataaatggttggaatcaaga
aagagagatttaagcagcaatgtatacaaaactctacaagactctagaattgaagacata
aatttagatttgattgtcgaacttttgattcacatatgcaagggaaaaccaggcgctatt
ctcgtttttttgccaggtattggtgaaattacgaaacttataaaattattatacgaaaac
aatttttttataccatataatttcgaaatatacccattacattcaaagttaccaacgtta
gatcagtacaagatatttgaaaggcccgaagaacatattaggaaaattataatagcaact
aacattgctgaaacatcaataacaattgatgatattgtgtatgttgtggactgtggtaag
atcaaaataagtggcttgaatgttgaacaaaatataaccactctacagactgaatgggtg
tcacaagccaatttacgccaaaggcgtggtcgcgctggtcgatgtcagccaggtatatgt
taccatttactaacaacgtatcgcgcagaacaaatccctgagagactcctaccggaactg
caacgaagtaatctattggaaccagtgttaatgattaagaaacttcgtttaggaatggca
aaggatgccttaaagttagtgccgtcaccgccagcagaaacaactattcagtgggctgta
aaacatttgcagatgtgtggagccttagatgatggagaaacattgacacctcttggttgg
catttagcaagattgccagtacaccctgctgcaggaaaactagtgctttttggtgccctc
tttggttgccttgaccgagcagccagtgtagctgctgtttggggtttcaaagaccccttt
caatttgtcataggtaaagagagaaaaattgacattacgaaacgtaatttagcacttgaa
gagccaagtgaccatatcgcaatttctgaagctattttaaaatgggaaaaatgttcccca
tcatcaaggcggtcatttgcgtatgataatttcctttcgaataacacattggaattgcta
tctgatatgaagaaacaactcgctaaagagctacgtcaaatgggatttttgaagcagggt
aatatccattccgtatgggaaaatcgaaacgcaaataatttgagcttatttaaggctatt
gttgctgcatcgttatatccaaatgtagcgtttgtcaagtggtcaaaccttaacaaacgt
cacaaggcaccaaaattttcggtattcagtccagaagatggaaagttatctatacatcca
agtagtgtaatgtccggattaaggggtgcaaatccctgtaaaaatcctggagttaactgg
gtcgtctattggttgaagcaaagaacatcagaactgtacctattagaagtcacctttata
tatacactaccattattattttttggagagtttgctgttactgatgatgtagaaagcccc
caaaactgcctgctgtcaatatcaaatatcaaagttcgatgtaatagagacagcgccaat
gtattcatggaattaagaagtctactggacaaagtgttagcatcaaaaattacggactca
agtactcagtcgctctattacaatgaatttcaagaacgggtccttaacgctgttattcga
ctaatcacagcggaagatgaaaaaactatgtatttaggtgacgatttttctgattctgat
aattcagaaagttag
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