Melitaea cinxia (Glanville fritillary): 123660734
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Entry
123660734 CDS
T09237
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123660734
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
123660734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
RuvA_C
PRORP
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
123660734
NCBI-ProteinID:
XP_045451739
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All DBs
Position
15:complement(11168762..11207947)
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AA seq
574 aa
AA seq
DB search
MSNETDLFISVPRSCLNDFYSKYLNLVETFYYVTLSENKSGNTNVKPDFVSFKVIFNLNP
VDSNFKPRELVDRIQKYVESSLGWAGERGEDSSYDSECDDDGGHRTASRTPSDTLAEEFA
EYVTLAPPPPNQAKIEFAVKLGYSERLARTALQRLGPDPPRNELLAELIKLAAKRPPRAP
SPPPAVEPDPPLERASLRHIVIDGSNVAMSHGNKEVFSCRGIEICVDWFRARGHKDITVF
VPKWRKEASRPDNPVADRDALDRLERNRVLVYTPSRLLGGKRLICYDDRYILKLAAETDG
IVVSNDNYRDLAAESPEFRKVVEERLLMFSFVNDRFMPPDDPLGRSGPTLDAFLRAPPSR
TDPPPACPYGRKCTYGNKCKFHHPERAGRPHKSVAEKLSERAARKARDLHTLSLPPSGRP
SDSKRPLARAHSATPRLADASLVSHFDRAQVPGPSQPPDLNPHRKLARQLTLNPVCDPRL
HAAATRVSSAPVGAAAALGPPLTGVSLSPCASEGALQHWEARRRMHFHLAGIFPEAQVAE
AMSTYPEETDPQKMCAIILDRYRPSEATLPRPTH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaaacagatctgtttatatcggttcctcggtcgtgtttaaacgatttttac
agcaaatatctcaatttagtcgaaactttttactatgttacgctctctgaaaacaaatca
ggaaatacgaatgtgaaaccggattttgtgagttttaaagtgatatttaatttaaacccc
gtggatagtaacttcaagccacgagaactggtggacaggatacagaaatatgtggagtca
tcactgggatgggcaggggaacgcggagaggactcgagctacgattccgagtgcgatgac
gatggaggtcaccgaacagcctcacgcacaccctccgacactctcgcggaagagttcgcg
gagtacgtcacgcttgcaccgccaccacctaatcaggctaaaatcgaatttgcggtgaag
ctgggttattccgaacgcctcgcgcggacggcgttacaacggctgggaccggatcctccg
cgtaatgagttactggcggaactcattaaactcgctgcgaagaggccgcctcgcgcgcct
tcaccaccgcccgccgtcgagcccgatccgccgctcgagcgcgcatctttacgacacatt
gtaatcgacggaagcaacgttgctatgagccatggcaacaaggaggtgttctcgtgtcga
ggtatcgagatatgcgtcgactggtttcgggctcgaggtcacaaagacatcacagtgttt
gtgccgaagtggcggaaggaagcgtcgcggcctgacaaccccgtggcggaccgtgacgct
ctcgaccggctcgaacgtaaccgtgtcctcgtctacacgcccagccgtctcctcggcggt
aaacgcctaatctgctatgacgacagatacatcctaaaacttgcggctgaaacggacgga
atcgttgtctcaaacgataactatagggacctcgcggccgaaagtcccgaattccgaaaa
gtggtcgaagagaggcttttaatgttctcctttgtcaatgatagatttatgcctcccgac
gatcctctaggccgatctggtccgacgctggacgctttcctaagggctccaccatcccga
actgacccgcctcccgcgtgtccctacggacgaaagtgcacctacggaaataaatgtaaa
ttccatcacccggaacgtgcaggaagacctcacaaatctgtagccgaaaaattatccgag
cgcgccgctcgtaaagcgcgtgatttgcacacgttaagtcttccacccagtggtcgtccc
tcagatagtaagaggcccttagctcgagctcattccgcaacaccgagacttgccgatgcg
tcgttagtgtcgcacttcgatagagcgcaagtaccgggcccctcacaacctccagacctg
aatcctcatcgaaaactcgcacgacagctaactttaaacccagtgtgtgatcctagacta
catgcagcggccacacgtgtgtcttcagctccggtaggtgcggccgcagcattaggtccg
ccattgacaggtgtatctttatccccttgtgcttcagaaggcgccctacagcattgggag
gcaaggcgacgaatgcacttccatttagcggggatattccccgaagcacaagttgcggaa
gcaatgtcgacctatccagaagaaaccgacccgcaaaaaatgtgtgcaattattttagac
cgatacagacccagcgaggctacgttacctcgtccgacgcattga
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