Melitaea cinxia (Glanville fritillary): 123660799
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Entry
123660799 CDS
T09237
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123660799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123660799
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123660799
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123660799
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123660799
U7-dependent histone pre-mRNA processing factors
123660799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
123660799
NCBI-ProteinID:
XP_045451791
LinkDB
All DBs
Position
16:complement(11465427..11481128)
Genome browser
AA seq
1096 aa
AA seq
DB search
MSSKYQQGSNVTAQNQLIQWMNEAGMAEGNKKANLLRKIIEVLLHQTPQMVPVYMENILS
LVSDKSTEVKKQVVTFIEELSKAFPHLLPKIIGQLQLLVIDHVVAVQKRAIQAASIVYRN
VLLWICKGNAEVSEMQYVWEHLTELKLLILNMIDSDNEGIRTHSIKFLEEVVLLQSSNPS
DDSDNGFSLENLPTHLPFLKRNSMEEESEHIFQLLLKFHNSQHISSVNLMACMTTLCLVA
KLRPKYLPNVVQALGDLHTTLPPTLSQSQVNSVRKHLKMQLLVLVKHPSSNEMMPQLTQL
LSDIGMTPQEIHKAIPKERRNKRLGEIKNGDTPAKRFRVDSPQSAAGSDSNSRSEFNIFD
DDSSQSSVTKATASEESIFEGLNSVENVVNLVTSTLRNNLPNSIPSHFMSLYKPIPNSGT
NTQKRGLAKMLLALIKDEPLVPPEVTTSTSILSDFGAKIPLLREDDEKTTLKNAVAKLQE
TSKADKQIENAVSKLMKETRQEHLKEEERKAKEKEKLIPPPTPTVPKLKQKVKLLKLQEI
TRPIPKEIKEKLMIQAVDRILKAEKEAAIGGAAQTRSKFITIFASSYTPDLRELVLNYIL
EDPMNRMDLALSWLYEEYAFMQGFNRHPSTLQPKLHEKHDENYNQLLCALITQISEREEP
VIESNKDVLLRKIYMEAPVVTDEAIDYLKHLITEDKSSLAMELLEELSIMRPPRSHKYVA
ALVCNVLSENEEIRDLTLKACVKIYKQGTEAAKKVIEKHALLYLGFISLSTPPQELFGNR
YMNRPWSDDLYKICLNLVMALFPEKEELIMEMGRVYGAAGAEAKRCVLRALEAPLRAAPG
AAPLRPALAALLADCPRGAETLLTRLVHILTDRAPPSAELVSRVRELYATRVSDVRFLIP
VLNGLSKKEILAALPKLIKLNPAVVKEVFNKLLGLQNPNNEQLPVSPEDLLVALHLIDPN
KAELKYIIKATALCFAEKNTFTQSVLSAVLQRLAEETEIPVLMMRTVLQALTLYPGLGPL
AINILQVLIEREVWTNKVAWEGWLKCAERLGAPAAPALAALPPRARALLPPHVAALGPQE
VPYAPNPVEPLPPGME
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaatatcagcaaggatccaacgtaactgctcaaaaccagttgatacaatgg
atgaacgaggctgggatggcagaggggaacaagaaagcgaacctcttgaggaaaatcata
gaggttttattacaccaaactccacaaatggtgcctgtttatatggaaaatattttaagc
ttagttagtgataaatcgactgaggttaaaaaacaggttgttacttttattgaagaacta
agcaaggcattcccacatctattacctaagataataggccagttacagttgctagtaata
gatcatgtagtagctgtgcagaaaagagcaatccaggcagcgagtattgtgtaccggaat
gttttattatggatctgtaagggaaatgcagaagtctccgagatgcaatatgtgtgggaa
catcttactgaactaaagttacttattctgaacatgatagacagtgacaatgaaggtatc
aggactcactctatcaagtttcttgaagaggtggttctcctacaaagttcaaaccctagt
gatgattcagataatggatttagtctagaaaatctacctacacacttacccttcttgaaa
cgaaactcaatggaggaagaatctgaacatatcttccaactgttacttaagtttcacaac
tcgcaacacatttcaagcgttaatcttatggcttgtatgacaactctatgcttagttgca
aaattgagaccaaagtatttaccaaatgtagtccaagctttaggcgacctgcacacgaca
ttaccgccaacgttatcacaatcacaagtcaattcagttcgtaaacatttgaaaatgcaa
ctattagtcttggtcaaacatccatcttcaaacgagatgatgccccagttgacgcagcta
ctatccgacattggtatgactcctcaggaaatacataaagcgataccgaaagaaagaagg
aataagcgtttgggagaaattaaaaatggagatacaccagctaaacggttcagagttgac
tctccacaaagcgctgccggcagcgacagtaacagtaggagtgaatttaatatttttgat
gatgacagtagtcagtcaagtgtaactaaagcaacagccagcgaagaatccatattcgaa
ggactcaatagcgtagaaaatgtcgtcaatctcgttacgtcgaccttgcgtaataatcta
cccaacagtatcccaagtcatttcatgtctttatacaaaccaataccaaattctggtact
aatacccagaagcgtggcttagcaaaaatgttactggctctaataaaggacgaaccactt
gttcctccggaagttaccacttctacttctatactatcggatttcggtgctaaaattcca
ctactacgagaagatgatgagaaaactactctgaaaaatgcagtagcgaaactccaagag
acatccaaagcggacaaacaaatagaaaatgctgtgtcgaaactgatgaaggaaactaga
caagaacatttgaaggaggaggaaagaaaagctaaggaaaaggaaaaactaattccacca
cctacaccgacggtgccaaaactcaagcaaaaagttaagttattaaaactgcaagaaata
acacgaccaatacctaaggaaataaaggaaaagttaatgatacaagctgttgatagaatt
ttgaaagcggaaaaagaggcagccataggtggagcggctcaaacacgctcaaaattcata
actatatttgcttcgagttacacacctgaccttagagagttagtgctaaattatattcta
gaagatcctatgaatagaatggacttagctttgtcatggttatatgaagagtatgccttc
atgcaaggctttaacagacacccgtcgaccttacaaccgaaacttcacgaaaagcatgac
gaaaattacaatcaattactttgtgctttaataactcaaatatcagaacgagaagagcca
gtaatagaatcaaataaagatgtacttttacgaaaaatttatatggaagctccagtagta
acagatgaagcgattgattacttaaagcacttaataacggaagataagtcaagtttagca
atggagttgttagaggaattgagtataatgaggcctccgagatcacacaagtatgttgct
gcattggtatgtaatgtgttaagtgaaaacgaagaaatccgcgatttaactcttaaagcc
tgcgtaaaaatctacaaacagggtacagaggcagctaagaaggttattgagaaacacgct
ctcttgtacctcggctttatatctctatctacacctccacaagagttgttcggaaacaga
tacatgaacaggccttggtcagacgacctttacaagatatgcttaaatctggtgatggca
ctgtttccggaaaaagaagagctgataatggagatggggcgcgtgtacggggccgcgggc
gcggaggcgaagcgctgcgtgctgcgcgcgctggaggcgccgctgcgcgccgcgcccggc
gccgcgccgctgcggcccgcgctggccgcgctgctggccgactgcccgcgcggcgccgag
acgctgctcacgcgcctcgtgcacatcctcaccgacagagctcctcctagtgctgaacta
gtgtcgcgtgtacgtgaactatatgctacacgtgtatccgacgtacggttccttatcccc
gtactaaatggactgtctaaaaaagagatcttagccgctttaccgaaactgataaaattg
aacccagctgtagtgaaagaagtatttaacaaactcctaggattacaaaatcctaacaat
gaacaattgccagtatccccggaagatctcttggttgctctgcacttaatagatcctaac
aaggctgaactcaagtatatcatcaaagcaactgcactctgttttgctgagaagaacacg
tttacacaaagtgtactgtcagcagtgctacaacggttggcggaagaaactgaaattcca
gtcctgatgatgagaacagtactccaagctctcacactctatccgggtctaggacctctg
gcgattaatatattacaagtgcttatagaacgagaggtgtggacgaacaaggtggcgtgg
gagggctggctgaagtgcgcggagcggctgggcgcgcccgccgcgcccgcgctggccgcg
ctgccgccgcgcgcgcgcgcgctgctgccgccgcacgtggccgcgctgggcccgcaggaa
gttccatacgcaccaaatcccgtcgaacctttaccgcccggtatggaataa
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