Melitaea cinxia (Glanville fritillary): 123662010
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Entry
123662010 CDS
T09237
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03013
Nucleocytoplasmic transport
mcix03015
mRNA surveillance pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123662010
09122 Translation
03013 Nucleocytoplasmic transport
123662010
03015 mRNA surveillance pathway
123662010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123662010
03041 Spliceosome [BR:
mcix03041
]
123662010
03009 Ribosome biogenesis [BR:
mcix03009
]
123662010
03012 Translation factors [BR:
mcix03012
]
123662010
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123662010
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123662010
mRNA cycle factors
Stress granule specific factors
123662010
Spliceosome [BR:
mcix03041
]
Complex C
Other components
EJC/TREX
123662010
Ribosome biogenesis [BR:
mcix03009
]
Eukaryotic type
90S particles
Helicases
123662010
Translation factors [BR:
mcix03012
]
Eukaryotic type
Initiation factors
eIF-4
123662010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
UvrD-helicase
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
123662010
NCBI-ProteinID:
XP_045452863
LinkDB
All DBs
Position
18:4144512..4147094
Genome browser
AA seq
405 aa
AA seq
DB search
MTASEVSYNRKIISEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtcagaagtatcttacaatcgtaaaataatatcagaagacttgtcgaatgtg
gaattcgatacaagtgaagatgtcgaagttataccaactttcgattctatgggtctacgc
gatgaattattacgtggaatatatacctatggtttcgaaaagccatcagctatacagcag
agaagtatattgccaatagtaaaaggccgtgatgtgatagctcaagctcagtctggtaca
gggaaaactgcaaccttttccatatcaatacttcagtcgctagatactacactacgtgaa
acacaagtattagtcctttcaccgactcgtgagttggctacacaaatccagaaagttata
ttggctttaggtgactttatgaacgtccagtgccatgcctgtattggcggcactaacctc
ggggaagatataaggaaactggactatggtcaacatgtagtatcaggaacaccaggacga
gtttttgacatgataagaagacgtgtgcttcgtacaaggtcaatcaaaatgttggtgctt
gatgaggcagatgaaatgttaaacaaaggttttaaggaacagatctatgatgtctaccgt
tatctacccccagcaactcaagttgtgcttatttctgctacactacctcatgaaattctg
gaaatgacatcaaagtttatgacagatcccataaggatacttgtaaaacgtgacgagttg
actctggaaggcatcaagcagttctttgtggctgtggaacgtgaggaatggaaatttgat
actctctgtgacctttatgatactctaacaataacacaagccgtgatcttttgtaatact
aagaggaaggttgactggttaacgcaaaagatgcaagaggccaacttcacagtaagctct
atgcacggagacatgccacagaaagaaagagataatattatgaaagagtttagatctggc
caaagccgagttctcattacaactgatgtctgggcgaggggaatagatgtccagcaagtt
tccctagtcattaattatgatctgcccaacaatcgtgagttgtacatccacagaatcggc
cgttcaggtcgttttggacgtaaaggtgtagctatcaactttgtaaaatcagatgacatc
aggattttaagagatattgaacagtactattcaacacaaattgatgaaatgccgatgaat
gtagctgacttaatttaa
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integrated database retrieval system
