Melitaea cinxia (Glanville fritillary): 123662047
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Entry
123662047 CDS
T09237
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix04137
Mitophagy - animal
mcix04140
Autophagy - animal
mcix04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123662047
04137 Mitophagy - animal
123662047
04148 Efferocytosis
123662047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcix03000
]
123662047
Transcription factors [BR:
mcix03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123662047
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
PAS_9
PAS_4
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
123662047
NCBI-ProteinID:
XP_045452892
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All DBs
Position
18:10313788..10441045
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AA seq
963 aa
AA seq
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MLVNGEPLYERCPVVGGFEETGWNVQCPVSNQWSRPPVNNLCNYDVYNGYSDLAVQCYTR
NCYVQDNPPQYYQQRVVYQPPSFQSELPCRQSQEWDYTSMCYNVDGQPCQYTNVVDLEDF
MNNEKRKEKSRVAARCRRTKEMQIFAELTAALPAKKEEVDQLDKASVMRLAISFLRVRDV
VSMLPEDKEAPKLQSPKGLEEVQSELSYMKALDGFVLVLSQQGDIVYCSENIAEHLGVSQ
MEIMGQSVFEFSHPCDHDEIREALRAGKDGKRDLLLRLKCTLTSKGRNVHLKSASYKVIH
VTGHMLTPSEEKEQMKSDVEDDKVNEIKKYTKSGALVAVGRPIPHPSNIEVPLNNMTFLT
KHSLDMKFTDIDECLMNTLGYDTEELIGRSLYDYHHAADSASLIQQFKSLFSKGQCETSQ
YRFLAKTGGYAWVQTQATVITDKQQKPISVICVNYIISGIECKDEVFAAHQVQHADLKPV
VVPTVPAPALQEVCVSTEPANGAIVAAILPEEERPIPVTELIFAPRKKEMNKGFLMFSQD
EGLTMLKDEPEDLTHLAPTAGDACIPLENSPFDMFDEFILSDNYCSLLGDDLANGSPVDS
LIGDSLLSSPEPQENESSCEQSSLLTELSLDAFDSNRSDNDVEDGNSPFIPTTDELPLLA
PAVMWGALPDNVSQARPQPSEAQTSAPALQRLLVAPPTGPPPQDLITNIYSDQGLIPSKN
ISTWDTGVKRVLKQEEEPTAKRAKRSPSPAPPPKSPSSSVLMNLLDTHPQEGKQMNQQPP
NYQLIMNSKRVPQSPVNRNIPISVINILQSSKPVMRDNTSMSNGQIIRSTISSPMSPLTL
NVGSPMYSLPSSPNTPNYSPAISPAPKDRVLSPYSTPQSLSPAGSYQTYSPGRLLSPTGV
MQGYDPYLTHKMQTSPEFMIQPNDMLLASNIPLPSTDFWPDSDIFSNQSTSDLLIAFDDV
KLV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgaacggggagcctctttacgagcgatgcccagtggtaggcggcttcgaagaa
acgggatggaatgtgcagtgtcctgtgtctaatcaatggtcgagaccgccagtgaacaac
ttgtgcaattacgatgtctacaatggctacagtgatttagcagtacaatgttacactagg
aactgttacgtacaagacaatccaccacagtactatcaacagagggtggtttaccaacca
ccaagttttcaatcggagctaccgtgccgtcaaagtcaggaatgggactatactagcatg
tgctataatgttgatgggcaaccgtgccaatacacgaatgtcgtcgacctagaagacttt
atgaacaatgagaaacgaaaagagaaatcgcgcgtggccgctcgatgtcgtcgtacaaag
gaaatgcagatttttgctgaactgactgctgcgttaccggcgaagaaagaagaggttgac
cagctggacaaggcatctgtgatgcgcctggcgatctcttttcttcgtgtacgcgatgtc
gtttctatgttgccggaagacaaagaagcgccaaagctgcagagtcccaagggtctcgag
gaagtgcagtctgagctctcgtacatgaaagcgttggatggcttcgtactagtgttgtca
caacaaggagacattgtgtactgcagtgagaacattgcagaacacctcggcgtctcgcaa
atggagattatgggtcagagcgtgttcgagtttagtcatccctgcgatcacgatgagatc
cgcgaagccttgcgcgcaggcaaagacgggaagcgtgacttgctcctacgcctcaagtgc
actcttaccagcaaggggaggaacgtgcacctcaagtctgcttcgtacaaggtaattcac
gtcacgggtcacatgcttacaccatcagaggagaaagaacaaatgaagagtgatgtagaa
gacgataaagtcaatgaaattaagaagtacaccaagtctggggcgctggtggccgtaggt
cgaccgataccacacccatccaacatagaagtaccactcaacaacatgacattcttgact
aaacacagcttggatatgaagtttactgatattgatgagtgtttaatgaatacactgggc
tacgatacggaggagttgattggtcgctctttatacgactaccatcacgcagccgacagc
gcgtctttgattcaacaattcaaatcattgttctcgaagggacaatgcgagactagtcaa
taccgtttccttgctaagaccggcggatacgcctgggtccagactcaggccacggtaatc
accgacaaacaacagaagccgatcagcgtcatatgcgtcaattacatcatcagcggtata
gagtgcaaagatgaggtgtttgccgcacaccaagtgcagcacgcagatttgaagccggtg
gtagttccaacggtaccagcacccgctctccaggaagtttgtgtatccacggaacctgct
aacggagcaattgtggcagctatcctcccagaggaggagagacctatacccgttacagag
ctcatatttgcaccaagaaagaaagaaatgaacaaaggatttctcatgttctctcaagac
gagggacttacaatgcttaaagacgagccggaagatttaactcacttggcgcctacagcc
ggtgacgcatgtatacccctggaaaacagtccatttgatatgtttgacgaattcatacta
agcgacaactactgcagcttactcggtgacgatctcgcaaatgggtcacccgttgattct
ttaatcggtgactccttactatcctcacccgaaccacaggaaaatgaatcgtcatgtgag
caatcgtcacttttgacggaactgtcattagatgccttcgatagtaataggtcggataat
gatgtcgaagatggaaattcaccattcatccctacaactgatgagctaccgctcctcgct
ccggctgtcatgtggggcgccctccccgataacgttagccaagctagaccccaaccatcg
gaggctcagacatcggcaccggccctgcaacgtctactagttgcgcctcctaccggccca
ccaccgcaggatctcattacgaatatttactcagaccaaggtctaattccaagtaaaaac
atatcaacatgggacacaggtgtgaaaagagttttaaagcaggaagaggagcctacagcg
aagcgtgctaagcgtagtccctccccggctcctcccccgaagtcgccttcctcgagtgtc
ctcatgaacctcctggatacacatccgcaagaagggaagcagatgaatcaacaacctcca
aactatcaactcattatgaattccaaaagagtccctcaaagtcccgtcaatagaaatatt
cccatttccgtcatcaatattctacagtcaagtaaacccgtaatgcgagacaacacgtca
atgtctaacgggcaaataatacgttcaacgatcagcagtccaatgtcccctctaacttta
aatgtcggaagccccatgtattccttaccatcaagcccaaacacaccgaactacagtccc
gctattagcccagcgcctaaagaccgcgtcctgagcccatattcgactccccaatccctg
tctccagctggaagctatcaaacgtatagccctggcagactcctgtccccgaccggtgtg
atgcaaggttacgacccatacctcacccataagatgcagacgagccccgaattcatgatc
cagccaaatgatatgctactcgcgtcaaacataccccttccttcaacggacttttggcct
gattctgacatattcagtaatcaaagcacaagcgatttgctaatcgcgtttgatgacgta
aaactagtttaa
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