Melitaea cinxia (Glanville fritillary): 123662077
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Entry
123662077 CDS
T09237
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123662077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123662077
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123662077
U7-dependent histone pre-mRNA processing factors
123662077
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
123662077
NCBI-ProteinID:
XP_045452922
LinkDB
All DBs
Position
18:complement(12901608..12924855)
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AA seq
729 aa
AA seq
DB search
MTSIIKLHCLSGAGDESPPCYVLQIDEFKFLLDCGWNEKFDMDFIKELKRHVNSIDAVLL
SHSDPLHLGALPYAVGQLGLNCPIYATLPVYKMGQMFMYDLYQSHRNVSDFDLFTLDDVD
TAFDRITQLKYNQSVDMKGKGLGLRITPLPAGHLLGGTVWRIAAPGEEDIVYAPDFNHKK
ERHLNGCEIERIMRPSLLLLGAMNADYVQQRRRLRDEKLMTTILSTLRGGGSVLVCTDTA
GRVLELAHMLDQLWRNKDSGLVAYSLLLLSNVSYNVVEFAKSQIEWMSDKLTRAFEGARS
NPFALRHLHLCHSVVEVTRTPGPKVVLASFPDLETGFARDLFLQWAPNPQNSIVLTARTS
PGTLARDLIEKGGDRIIELTVQRRLRLEGAELEEFLQQRSRLNSAVNKEEVGGISSDSES
DGELEMWVVTGRHDIPVRSDSRPTGCFKTNKRHHAMYPCHEERARVDDYGEVIRPEDYRL
AEIVDAEGEIRDVPPAPAQKIEPQEEITEIPSKCVSSMRQVQIRANIQYIELEGRCDGES
LLRVVAHAKPRAIIGLRAGPAALKTLAKHCESEGIEQIFTPKRGEIVDATTESHIYQVKL
TDGLLAGVWWKQAGDAELAWLSAVVTAPRAREPAAGTEGEAAVDEPVSLEPAAGAPHAAS
FVNAVRLSELRAAIARLGLNAEFSAGALECCNGTVAIRRLENGRVALEGVLSEEYFKIRE
MLYDQFAIV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacttctattataaaactacactgcctatccggagctggagatgaatctccaccatgt
tatgtgctccaaatagatgaattcaagtttcttctggactgcggatggaatgaaaaattt
gacatggattttataaaggaacttaaaagacatgtaaacagtattgatgcagtcctcctt
tcacattctgatccgttacatctcggggcactaccttacgctgttggccagcttggtcta
aactgtcccatatatgccacactgcccgtttacaagatggggcaaatgtttatgtacgac
ttgtaccagtcacacagaaacgtctcagattttgatctgtttactttggatgatgtggat
acagcttttgatagaataacacagctgaaatacaatcaaagtgttgatatgaaaggtaaa
ggcctaggactccgcataactcctttaccggctggccacttactcggaggcacggtgtgg
cgtatcgccgcgcccggtgaagaagatatagtctatgcaccagacttcaaccacaagaag
gaaaggcatctcaacggatgtgaaatagagagaatcatgagaccatcactgctcttactt
ggagctatgaatgctgattatgttcagcagagacggagattgagagatgaaaaactaatg
actacgatcctcagtactcttcgcggaggtggatcagtactcgtgtgtacggacactgcg
ggtcgagtgttggaattagctcacatgttagaccagttatggagaaataaggactcgggg
cttgtcgcctactcgctgcttttgttgtctaacgtcagctataatgtcgtagagttcgct
aaatcacagatagaatggatgagtgacaaactgacacgtgcatttgaaggtgctcgcagt
aacccatttgcattgcgacatctacacctctgccactcagtcgttgaggtcaccaggacc
ccaggtcccaaagtcgtattagcatcttttccggacctcgagacaggctttgcaagagac
ctatttttacaatgggcgccgaatcctcaaaactcaatagttctgactgctaggacgtct
ccaggtacactagctcgagatctgatagagaagggtggtgaccgcattatagagctgaca
gtacagcgtcgtttgagactcgaaggtgctgaattggaagaattcctccagcagaggagc
cgcctcaacagtgctgtcaacaaagaagaggtaggtggaatatcgtcggattcagaatca
gacggcgaactggaaatgtgggtggttaccggtagacatgatatacctgtgaggagtgac
tccaggcctactggatgcttcaagaccaacaagagacaccatgcgatgtacccatgccat
gaagagagggccagggtagatgactatggggaagtcatacggccggaagattaccgattg
gctgagattgttgacgcagaaggggaaatacgagacgtgccgcccgccccggcgcagaag
attgaaccacaagaagaaataaccgagataccgagcaagtgcgtcagttcgatgcgtcaa
gttcaaataagggccaacatccagtacatcgagctagaaggtcgctgcgatggagaatcg
ttactaagagtagtggcccacgccaaaccccgcgccataatagggcttcgagccggaccc
gcagccctaaagacactagctaagcactgtgaaagtgaaggtattgagcagatattcact
ccgaaacgaggggagattgtcgacgccaccacagagtcccacatatatcaggtgaagctg
acggacgggctgctggcgggcgtgtggtggaagcaggcgggcgacgcggagctggcgtgg
ctgtccgccgtcgtgaccgcgccgcgcgcaagggagcccgccgccggtactgaaggtgag
gcggcggtggacgagccggtgtcgctggagccggcggccggcgcgccgcacgccgcgtcc
ttcgtgaacgccgtgcgcctgtccgagctgcgcgccgccatcgcgcgcctcggcctcaac
gcagagttctcggccggcgcgctcgagtgctgcaacgggaccgtcgccatacggaggttg
gaaaatggacgtgtcgctctcgaaggcgtgttgtctgaggaatatttcaaaatcagagaa
atgctgtacgatcaattcgctattgtttaa
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