Melitaea cinxia (Glanville fritillary): 123662360
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Entry
123662360 CDS
T09237
Name
(RefSeq) probable ATP-dependent RNA helicase spindle-E
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcix03036
]
123662360
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
123662360
Chromosome and associated proteins [BR:
mcix03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123662360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
HA2_C
HA2_N
AAA_11
ResIII
AAA_19
SNase
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
123662360
NCBI-ProteinID:
XP_045453165
LinkDB
All DBs
Position
18:complement(8428695..8467442)
Genome browser
AA seq
1438 aa
AA seq
DB search
MDELRAFLKNPSANVVRLRGPLTGGLRLTKHDNLNDLNRKEEHRQAVLPSGTDYAREVKK
REAEMYLKNETEREVYESMTGGLDSLEKLSSWGASVHNVEQLTAEAMTEVYNKYSFKMSE
DTKNLAINSYHDNILDRIKAFPVVIIEGPTGCGKTTQVPQWILDDAYNNRKPCKIVVTQP
RKIAAISIAKRVAQERGWDVGGVVGYQVGLENRTSNDTRISYVTTGVLLQKLVNTKNMNE
YTHIILDEVHERGQEMDFLLLVVKKLLYTVSPGVKVVLMSATFNCKAFADYFLIPIPGGF
QMSSCLKVVNTQPTFSVKTFYLNNLHKFGAIVQKATPKNDEPVILPEMYHVVIKLINAFE
LIDKQEEYTNRGEADLPSVLVFLPGIYEIEELYNCLTDPILRLKIGDAESANYTWWVLPL
HSTITADEQVRVFQRSPPGHRKIILATNLAESSITVPDIKYVIDFCLMKVLVADPSTNFT
SLQMSWASKTNCDQRAGRAGRVRDGRVYRLVTDTFYETFKKECQPELIRCPLERLVLIAK
MLDMGPPSDILALAMDPPDMSNIYRTILVLKEMGALKKTLNDEWCASDGDLTYLGRIMAK
LPIDVRSSKLIVLGHIYGCLEESIIMAAAMSVKNIFSSPFRERLNAYNSRLTWADGSTSD
CIALLNVYRVWSHLRQQKYFKQQGTSEVQWARRFFVQVRALREVDDLSRELRSRLAREGI
DPAQPTSPWSQHELPLVLKVIIAGAFYPQYFVQTTTDEARERDAVRALGGLDPRCSVYLR
GFPDGQPPQVYAAAVRTAVRAHIGDEPRVSFDRNSRKIFLTFQDNNQNGKTDKVKGGDPT
IPGQVVLPVYKAIKARQLKMDIRIPLLPIEKANALAAAMEEEKKSVDMQKFVPRLPEIDD
THFPLKISQLIDVGRFWVQYDDASTANELRNIQAVLNRKSGLPCVQGVQVDDLVAAPYAD
ASGTQMYRARVTKILPRDMLEVLYIDYGSAARVGTCSVRGVPGAARDTPPLAMRCALAGL
APAPLLHAHAHWAPAARQLLADLVAHGRLLAKIYSVTHGIVSIELLAKGGEININEELLK
RGYAISCEESYDSKLNHDLRQTATELNLAQKRAYNKEQTELAYSRLREIEAPSYKECVSD
VCLKGPDSPLESIVHNMMYSSRDKQVQIEWNSVNSVLLDTEPQEVYERLLVAAEVGQNEH
SSKLTLRHTTLMPNIRGLPAIIALLFCPEAELRRDAGGSRYVSVLCGLGGAPDASPRFPE
HDLLVNIDADLDVDDIGLINHIRYLMDYMMFCNEGQDIPTPDDFRPKVPKYIRDELMQLL
QKRRKKRDPQAVRNAWEWKSIPEEDIMEITNPDMVERSVVYPLHVPLELYPVSRDQLIAL
KQDNEELKMLVSRSLLSSVSNLVCKLCETLPMSTQAMRLHLCSNAHIEKEEDLRTVQS
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctacgtgcatttctcaaaaatccctctgctaacgtagtcagacttagaggt
ccacttactggcggacttcgtctaactaaacatgataatctaaatgacttgaatagaaag
gaagaacatcggcaggctgtactgcccagcggcactgattacgcacgtgaagttaaaaaa
agagaagctgaaatgtacttgaagaacgaaacggaacgagaggtatatgaaagcatgaca
ggaggattggattctttggagaaactttcatcatggggagcttctgtacataatgttgag
cagttgacagcagaagctatgacagaagtttacaacaaatattcttttaagatgagcgag
gacacaaagaacctagctataaattcctatcatgataatatattggatagaataaaagca
tttccagttgtcataattgaagggccaacaggatgcggtaaaacgactcaagtaccgcaa
tggatacttgatgatgcttacaataacaggaaaccttgtaagattgtcgtaacacaacct
agaaaaatagctgctatatctattgcaaagagagtggctcaagaaagaggctgggatgtg
ggtggagttgtcgggtatcaggttggccttgaaaacagaacatcaaatgacactagaatc
agctatgttactactggagtcttattacaaaagctggtaaacacaaagaatatgaatgaa
tacacacatataatacttgatgaggtccacgaacgagggcaagaaatggatttcttgtta
ttagttgttaaaaaattactttacacagtgtctccaggagttaaagttgttcttatgtca
gctacgtttaattgcaaagcttttgctgactactttctcatcccgataccagggggattt
cagatgtcatcatgcttaaaagttgtgaacacccagccgacattctctgtgaaaacattt
tatttaaataatctgcataaatttggcgcgattgttcaaaaagcgacaccaaaaaatgac
gagccagtaattcttccagagatgtaccatgttgttataaaacttataaacgctttcgaa
cttatagacaagcaagaagaatatacaaacagaggtgaggctgatctgccctctgtgctt
gtatttctaccgggtatatatgaaattgaagagctctataattgtctcacggatcctatt
ttaaggcttaaaataggagatgcagaaagtgctaactacacatggtgggtactacccctc
cattcaactattacagccgatgaacaagtgagggtgttccagcgatccccgccaggacat
cgtaagataatactggccactaaccttgcagagagctctataactgtacctgatattaaa
tatgtgatagacttctgccttatgaaagttttggtcgcggatccaagcacgaatttcacc
tctttacaaatgtcgtgggcttccaagacaaactgtgaccagagggctggacgcgcgggt
cgagtgagggatgggcgcgtttacagactcgttactgataccttttatgaaacctttaaa
aaggaatgtcaacctgaactaattcgatgtcccttggaacgcctcgtgttaatagcgaag
atgttagacatgggccctcctagcgacatactagctctggctatggacccgcccgacatg
tccaacatataccggactatacttgtgcttaaagagatgggtgcattaaaaaagacttta
aatgatgaatggtgtgcatccgacggtgatttaacatatttgggacgtataatggcaaag
ttacccattgatgtacgaagctctaagctgattgttctcggacacatatatggttgtttg
gaagaaagtattataatggccgctgcaatgtctgtaaagaatatatttagcagtcctttc
cgagaacgtttgaacgcgtacaactctaggcttacttgggctgacggttctactagcgat
tgtattgctctacttaatgtttatcgggtgtggagccacctccgtcagcagaagtacttc
aagcagcagggcacgagcgaggtccagtgggcgcgccgcttcttcgtgcaggtgcgcgcg
ctgcgcgaggtcgatgacctttcgcgtgaactgcgctcgcgcctcgcccgggagggcatt
gaccccgcgcagcccacctcgccctggagccagcatgagctgccactggtgctgaaggtg
atcatcgcgggcgcgttctacccccagtacttcgtgcagacgacgacggacgaggcgcgc
gagcgcgacgccgtgcgcgcgctgggcggcctggacccgcgctgctccgtgtacctgcgg
ggcttccccgacgggcagccgccgcaggtgtacgcggccgccgtgcgcaccgccgtgcgc
gcgcacatcggggacgagccgcgcgtctccttcgacaggaacagcagaaaaatatttttg
acattccaagacaataatcaaaatgggaagactgataaggtcaaaggcggtgacccaacg
attccaggacaagttgtcttaccagtgtacaaagcgattaaagcgagacaactgaaaatg
gacattagaattcctttactacccattgaaaaagcaaatgctctcgctgctgctatggag
gaagagaaaaaaagtgtagacatgcaaaaatttgtgcctcgtcttccagagatagacgat
actcatttcccgttaaaaatatctcagctaatcgacgtcggccgtttctgggtgcagtac
gacgacgcatccacggctaacgaactccggaacattcaagcggttctcaaccgcaagagc
ggcctcccctgtgttcagggcgttcaagtggacgacctggtggccgcgccctacgcagac
gccagcggcacccagatgtaccgcgcgcgcgtcaccaagattctgcctagggatatgctg
gaggtgctgtacatcgactacggcagcgcggcgcgcgtgggcacgtgcagcgtgcgcggc
gtgccgggcgcggcgcgcgacacgccgccgctggcgatgcgctgcgcgctggccggcctg
gcgcccgcgccgctgctgcacgcgcacgcgcactgggcgcccgccgcgcgccagctgctc
gccgacctcgtggcgcacggccggctgctggccaagatttactctgtaacacacggcata
gtttcaatcgaactgctggccaaaggtggggagataaatataaacgaagagcttttaaaa
agagggtacgcgatatcatgcgaagagagctatgactctaagttgaatcacgatctgcga
cagacagcaacggaattgaatttggcacagaagcgcgcctacaacaaggagcagacggaa
ctggcgtacagtcgactgagagaaatcgaagcacccagttacaaggagtgcgtttcggat
gtgtgcttgaagggacctgatagtccgttggaatcgatcgtacacaatatgatgtactcg
agccgcgacaaacaagtgcaaattgaatggaactctgtcaactccgtgctactcgacacc
gaaccacaggaggtctacgaaagactcctcgtggcagcggaagtgggtcagaacgaacat
agcagtaaactcacactgcgacacaccacacttatgccgaacatcagaggcctacctgcc
atcattgctttgctgttttgtcccgaggcggagctgcggcgcgacgcgggcggctcgcgc
tacgtgagcgtgctgtgcgggctgggcggcgcgccggacgcctcgccgcgcttccccgag
cacgacctgctcgtcaacatcgacgcggacctcgacgtcgacgacatcggcctcataaat
catattcgctatctaatggattacatgatgttctgcaatgaaggccaagacataccgact
cctgatgatttcagaccaaaagtacccaaatacatacgagacgaactaatgcagttgctt
caaaaacgccgtaagaaacgtgatccacaagccgtgcgaaacgcatgggagtggaagtcg
attcctgaagaggatataatggaaatcacgaacccggatatggttgaaagatccgtagtg
tacccgctgcacgtgcctttagaattgtatccagtttccagagaccaactgatcgctttg
aaacaagataatgaagaactaaagatgcttgtcagcaggtcacttctgtcatcagtatcg
aatcttgtctgcaagttatgcgaaacactccccatgtcgactcaagctatgcggctacat
ctctgctctaacgcacacattgagaaagaggaagacttacgcaccgttcaatcttag
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