Melitaea cinxia (Glanville fritillary): 123662402
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Entry
123662402 CDS
T09237
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123662402
Spliceosome [BR:
mcix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123662402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_1
TPR_16
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
123662402
NCBI-ProteinID:
XP_045453200
LinkDB
All DBs
Position
18:6603697..6627155
Genome browser
AA seq
979 aa
AA seq
DB search
MDDDASSDLQKCLSDGHMDTDEGPLINENSNGLSQLLTDGEFSVDAVVVDESSASNQAFL
NAVELSGSVGDYLDNNTVGFNTDSFDVGDNAVNFPSDSLNNVLSDGDTRFNDAFKTTSDI
DLDFSETQKSEIEAASEPDFNNVIENDLVSASSEDVVKHNDITMETQDNDQMTNDIPKET
NLSEVENGQLLKKKDSEDEMLFSNNGKSNAIENKKTCNEVQDSDSAATKIESDNVSEEKL
QESKIIENEENKKVGGAEETEVVSEDELPTVQKPSVKDAENVSDDELPGPKPAELPADTE
VVSEDELPASKKDTKESRKRKTGEERDGYDPGSPTSEGESSGKKQAIAKNGESKPVPSEK
RSSVDEKPKKKTLPELDKYWKVVNDDPTDFTGWTYLLQYVDQESDVEAAREAYDAFLSHY
PYCYGYWRKYADYEKRKGSKKKCLEVLERGLKAIPLSVDLWIHYLNHVKSTRTEDHVYIR
SQYERAIEACGLEFRSDRLWESYIKWEAENGSALQVTNIYDRLLATPTLGYTSHFDNFQE
HVMSEPVSGVVSAAELVRLRGEVRDAAPAPPPPDLPPGEDEPLDHVASEEEAQAIKERII
ATRRKVHKATGEEVAARWTFEEGIKRPYFHVKPLERCQLKNWKAYLEWEKQNGSFKRALV
LHERCLIACALYEEFWMRLIKFLEERAATQPELVALQREALERACTVHHLGKPELHMLWA
QFEEAHGNAARAADILERFEKSCPTLVQIHYRRINLERRRGDYDKCIQLYEGYISSAKFK
PVASAMAIKYARFLFHVKQDKAAARKVLDEAIIKEPLNARLHMQRLDLALHTPGTPYEEL
EELVMSYEKQEGAEAETVAALAARRRELAEELGPAAAARAAAAQLRAAHKLLRKRARAGK
HDAPAHHAATTDAKKKECAASAVSATAVTCSASSYYQTPAATAQSYDQSYAQPYTPPWGY
QQPPYQHHAHPWPQYPNYY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgacgccagttccgatttacagaagtgtttatcagacggccatatggataca
gatgaagggccgctaattaatgaaaattcgaatggtttgtcacaattattgaccgacggg
gaatttagtgttgacgctgtggttgttgacgagtcgtctgcgtcgaatcaagcttttctt
aacgcggtcgaactgtcgggcagcgttggtgattatttagacaataacacggtcggcttt
aacaccgactcgttcgatgtcggcgacaatgctgtcaacttccccagcgattctttgaat
aacgtgctgtccgatggagacacccgctttaacgatgccttcaaaactacctctgatata
gatttagatttctcagagacccaaaaatctgaaatagaggctgcaagtgagccagacttt
aataatgtgatagaaaatgatttagtgtctgcgtcatctgaagatgttgtgaaacataat
gatatcactatggaaacacaagataatgatcaaatgacaaatgatatacccaaggaaacc
aatttgtctgaagttgaaaatggccagctattaaaaaaaaaggattctgaagatgaaatg
ctatttagtaacaatggaaaatctaatgcaattgaaaataaaaaaacatgcaatgaagtt
caagacagtgatagtgctgctacgaaaattgaatcagacaatgtaagtgaagaaaaacta
caagaatctaaaattatcgaaaatgaagaaaataaaaaggtgggtggtgccgaagaaaca
gaagttgtgtctgaagatgagctcccaacagttcagaaaccgagtgtaaaagatgctgaa
aatgtctcggatgatgaactaccaggacctaaacctgccgaactacccgccgatactgag
gttgtatctgaggatgaattgccggcgtcaaagaaagacacaaaagaatctcgaaaacga
aaaaccggggaagaaagagatggttatgatcctggttctccaacatctgagggtgaatcg
tctgggaaaaagcaggcaatagctaagaatggtgaaagcaaacctgtgccttctgaaaaa
agatcatctgtggatgaaaaaccaaaaaagaaaactcttccagaacttgacaaatactgg
aaagttgttaatgatgaccctacagactttacagggtggacttatttattacaatatgtt
gatcaagaaagcgacgtggaggccgcgcgggaggcgtacgacgcgttcctgtcgcactac
ccgtactgctacggctactggcgcaagtacgccgactatgaaaagcgtaaaggaagtaaa
aagaaatgcctcgaggtgttggaaaggggacttaaagctattcccctatccgtggacctt
tggatccattatctcaatcacgttaagtcgacgaggaccgaagaccacgtctacattcgg
tcgcagtacgagcgggcgatagaggcttgcggcttggagttccgctcggatcgcctttgg
gagtcttacatcaagtgggaagcggagaacggatcagctctacaagtcaccaacatctat
gatcgcctcttggctacgcccacactcggttacacttcacatttcgacaatttccaggag
cacgtgatgtcggagccggtgtcgggcgtggtgtcggccgcggagctggtgcgcctgcgc
ggggaggtgcgcgacgccgcgcccgcgccgccgccgcccgacctgccgcccggcgaggac
gagccgctcgaccacgtcgcttcagaggaagaggcgcaggcaataaaggaacgtatcatc
gcaactcggcggaaagtgcacaaagccaccggtgaggaggttgccgccaggtggaccttc
gaagaggggatcaagcgtccctacttccatgtcaaacctttggagaggtgtcagttgaaa
aattggaaagcgtacctcgaatgggagaagcaaaacggttcattcaagagggccttggta
ctacacgaacgatgtttaatcgcctgtgccctttatgaagagttttggatgcggctgatc
aagttcctggaggagcgcgcggcgacgcagcccgagctggtggcgctgcagcgcgaggcg
ctggagcgcgcctgcaccgtgcaccacctgggcaagcccgagctgcacatgctctgggcg
cagttcgaggaggcgcacggcaacgcggcgcgcgccgccgacatcctcgagcgcttcgag
aagtcctgccccacgctcgtgcagatccactacagacgaataaatctagaacgtcgtcgc
ggtgactatgacaagtgtatccagttgtatgagggttacatatcttctgccaaattcaaa
ccagtggcgtcggctatggcaattaaatacgcgcgtttcctatttcacgtaaagcaggat
aaggccgccgcccggaaggttctcgacgaagctataataaaagaacctctaaatgccaga
ttgcatatgcaacggttggacttagctctacacacgcctggtacaccttatgaagaactc
gaagagctggtgatgagctacgagaagcaggagggcgcggaggcggagacggtggcggcg
ctggcggcgcggcggcgcgagctggcggaggagctcgggcccgccgccgccgcgcgcgcc
gccgccgcgcagctccgcgccgcgcacaagctgctgcgcaagcgcgcgcgcgccggcaag
cacgacgcgcccgcgcaccacgcagctacgacggacgcgaagaagaaggagtgcgcggcg
agcgcggtgagcgccaccgccgtgacgtgcagcgcctcctcgtactaccagacgccggcc
gccacggcgcagtcctacgaccagtcgtacgcgcagccctacacgccgccctggggctac
cagcagccgccctaccagcatcatgcgcacccttggccgcagtaccccaactactactaa
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