KEGG   Melitaea cinxia (Glanville fritillary): 123662622
Entry
123662622         CDS       T09237                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
mcix  Melitaea cinxia (Glanville fritillary)
Pathway
mcix03030  DNA replication
mcix03410  Base excision repair
mcix03420  Nucleotide excision repair
mcix03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123662622
   03410 Base excision repair
    123662622
   03420 Nucleotide excision repair
    123662622
   03430 Mismatch repair
    123662622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcix03032]
    123662622
   03036 Chromosome and associated proteins [BR:mcix03036]
    123662622
   03400 DNA repair and recombination proteins [BR:mcix03400]
    123662622
DNA replication proteins [BR:mcix03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123662622
  DNA Replication Termination Factors
   ELG1-RFC complex
    123662622
Chromosome and associated proteins [BR:mcix03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123662622
DNA repair and recombination proteins [BR:mcix03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123662622
  Check point factors
   HRAD17(Rad24)-RFC complex
    123662622
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Rad17 RCF1-5-like_lid AAA_24 RuvB_N Viral_helicase1 AAA_11 AAA_5 Mg_chelatase nSTAND3 MeaB DEAD AAA_19 AAA_18 AAA_assoc_2 RNA_helicase MipZ IstB_IS21 NTPase_1 ResIII AAA_28 ABC_tran AAA_30 AAA_25 AAA_23 MCM DNAX_ATPase_lid CbiA AAA_3 SRP54 ATPase_2 AAA_7
Other DBs
NCBI-GeneID: 123662622
NCBI-ProteinID: XP_045453393
LinkDB
Position
19:complement(15423372..15426448)
AA seq 351 aa
MSDDDVSIMEVDEVEPTPKKLIGGPSKSTSNLPWIEKYRPQTFADIVGNEDTVSRLSVFA
RTGNAPNIIIAGPPGVGKTTTILCLARALLGSAFKEAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPAGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSR
CAVLRYTRLTDAQILAKVIEVCEKEQLSYTEEGVNAIVFTAQGDLRSALNNLQATAQGFA
HVSPDNVFKVCDEPHPMLVRGMLESCIRQDIHEAYKVIAKLCKLGYAAEDIVGNVFRVCK
TLDVDEDVKLALIREVGRTHLRVADGLASPLQLAALLARACRAAARRPPDW
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgagtgacgacgatgttagtataatggaggttgatgaggtggaaccgacaccaaaaaag
ctgattggaggtccaagtaaatcgacgtctaatttgccgtggatagaaaaatatcgacct
caaacgttcgctgatattgtaggcaatgaggacaccgtgtcgcggttgtctgttttcgcc
cgcactgggaatgctccaaacataatcatcgccggtccgcctggtgtcggcaaaacgacc
acaattctctgtttggcgcgagcactgctcggatccgcatttaaagaggccgtgcttgaa
ctcaacgcttctaatgatcgcggtatcgatgtcgtccgcaacaaaatcaaaatgtttgcc
cagcagaaagtaactctgcctgcggggcgacacaaaatagtgatactagacgaggcagac
agcatgactgatggtgcgcagcaggcactgcggcggacgatggagctctactcgagcaca
acgcgatttgctcttgctgccaacaacagtgaaaagattattgaaccaatacaatcccgc
tgcgccgtactgcggtacaccaggctcacagatgcccagatattggccaaggtgattgag
gtatgtgaaaaggagcagttgtcttacacagaagagggcgtaaatgccatagtgtttaca
gcacaaggtgacctgcgctccgccctgaacaacctgcaggccacggcgcaggggttcgcg
cacgtcagccccgacaacgtgttcaaggtgtgcgacgagccacaccctatgctcgtacgt
ggcatgctcgagtcttgtattcgccaagatattcacgaggcttacaaggtgatagccaag
ctgtgcaagctgggctacgcggcggaggacatcgtcggcaacgtgttccgcgtgtgcaag
acgctggacgtggacgaggacgtgaagctggcgctcatccgcgaggtggggcgcacgcac
ctgcgcgtggcggacgggctcgcctcgccgctgcagctggcggcgctgctggcgcgcgcc
tgccgcgccgccgcgcgccgcccgcccgactggtag

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