Melitaea cinxia (Glanville fritillary): 123662626
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Entry
123662626 CDS
T09237
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03015
mRNA surveillance pathway
mcix03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123662626
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123662626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123662626
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
123662626
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
123662626
NCBI-ProteinID:
XP_045453398
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All DBs
Position
19:5415878..5433111
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AA seq
689 aa
AA seq
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MADGGVDIDLYADDIESDFNRQDDFGGENVDLYDDVIAAPAAKPEDGDGPPNSAAPQHSH
PPEETNGTAPYHNNAPSHGHHGRRFQLYVGNLTWWATDQDIANAIADIGVTDFQDVKFFE
NRANGQSKGFCVISLGSDQSIRMIMDRLPKKEIHGQHPVVTLPTKQALNQFESQSKTRST
PPGPNPGMRGPHPGGPPGPHPGEFFGGGPNGPGPNGPRMMMPGPGHHQLRGPPPGPHGPP
HHMPQHQGPPPHHMAPHQGPPPHQGPPQHRPPMQFQGPPQMQRAPGGPGPGPGPRAGPEW
PRPHHMPSPAPQYGPPQHQMPHQMPPPHAPPGQGMPPPHHQLPPHQQGPPRGPAPLPQHP
GVGGAPAPHVNPAFFSQQPPVQPAPQVQPPQPAPQGPGAPYGHPAHGAPPPAQGPPPGAR
QPYGRPPTSYPAGVEARPAHHSAPLGPHAHAAHPLPAHPLPAISEAEFEEVMSRNRTVSS
SAIARAVSDAAAGEYASAIETLVTAISLIKQSKVAHDDRCKILISSLQDTLHGVETKSYG
GERRRSRSRERDARAHHRAPRRRERSASRYRDRSRDRDDRDRYRERSRDRERDRDTYYRD
YRERERDRSRSRDRERTDHYNRGHSREERPRKSPVEPAAEGGAGDAAAKSRTTAAPYYDE
RYRERRDRDPPQTDRDRDRDRDHRRDARH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggcgtggatattgatttatacgccgacgacattgaatctgattttaat
agacaagatgactttgggggggaaaatgtagatttatatgacgacgtaatagcagcacca
gcagcgaaaccggaggatggagatgggccgccaaactcagcagcaccgcagcactcgcat
ccaccagaagaaactaatggcacagctccttaccacaacaacgcacctagccacgggcat
catggccgacgcttccaactttacgtcggcaatttaacctggtgggcaaccgatcaagat
attgctaacgcgatcgccgatatcggcgtgacggattttcaagatgtcaagttcttcgag
aacagggctaatggacaatccaaaggtttctgcgtcatttcgctgggctccgaccagtcc
atcaggatgatcatggaccgtcttccaaagaaggagatacatggacaacaccccgtcgtg
actttgcctactaaacaggcattaaaccaatttgaaagccaatcgaagacgaggtcgact
ccgcctggacccaacccaggtatgagaggtcctcaccctggcggaccacccggcccacac
cctggagaattctttggaggcggaccaaacggccctggaccgaacggtccacgaatgatg
atgccgggtccgggtcatcaccagctccgaggaccgccccctggacctcacgggcctccg
caccatatgcctcagcaccaaggccctccgcctcatcacatggcgcctcatcaagggccc
ccgccccaccagggaccgccacaacataggcctcccatgcagttccaaggccccccacaa
atgcagcgggctcccggtgggccgggacctgggccagggcctcgcgcgggccctgagtgg
cctcgtccgcaccacatgcccagtccggcgccgcaatacggccctccacaacaccaaatg
cctcaccagatgcctccacctcacgctcctcctgggcagggtatgcctccccctcatcac
cagctcccaccacatcaacaaggcccccctagagggcctgcaccactacctcaacaccct
ggcgtgggaggtgcgccggcgcctcacgtgaacccagcgttcttcagccagcaaccgccc
gtacagccggcgccacaagtgcagcctccacagcctgcgccgcaagggccaggtgctcca
tacggacatccggctcacggtgcaccaccgccggcacaaggcccccctcctggcgctagg
caaccatatggaagacctccgacgagctacccggccggcgtggaggcccggccggcgcac
cacagcgcgccgctgggcccgcacgcgcacgccgcgcacccgctgcccgcgcacccgctg
cccgccatcagcgaggcggagttcgaggaggtcatgagccgcaacaggacggtgtcctcg
agcgccatcgcccgcgccgtcagcgacgccgccgcgggcgaatacgcctccgctatagag
acgctcgtcacggccatatctctaattaaacagagcaaggtggcgcacgacgatcgctgc
aagattctaatctcatcgctacaagacaccctacacggagttgagaccaaatcttacgga
ggcgaaagacgtcgatcgcgatctagagaaagagatgcacgtgcgcatcaccgcgcgccg
cgccgtagagaacgatccgcctcgcgataccgagatagatcaagggacagagatgatcgg
gaccggtacagggaacggtcgagggatcgtgaacgcgaccgtgatacgtattatagagat
taccgtgagagggaacgcgacaggtctagatctagagaccgggaacgtaccgatcactat
aacaggggacacagtcgggaagaacggccacgcaaatcgccagtggaaccggcggctgaa
ggcggagccggcgatgcggcggcaaagagtcgcacaactgcggctccttactatgatgag
cgatatcgcgagcgacgcgaccgcgacccgccgcaaaccgaccgcgatcgcgaccgcgac
cgcgatcaccgccgcgacgcgcgacactag
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