Melitaea cinxia (Glanville fritillary): 123663084
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Entry
123663084 CDS
T09237
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03030
DNA replication
mcix03410
Base excision repair
mcix03420
Nucleotide excision repair
mcix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123663084
03410 Base excision repair
123663084
03420 Nucleotide excision repair
123663084
03430 Mismatch repair
123663084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcix03032
]
123663084
03400 DNA repair and recombination proteins [BR:
mcix03400
]
123663084
DNA replication proteins [BR:
mcix03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123663084
DNA repair and recombination proteins [BR:
mcix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123663084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
PTCB-BRCT
AAA_22
AAA_14
AAA_30
AAA_5
AAA_17
AAA_18
RuvB_N
AAA_16
AAA_33
AAA_19
NTPase_1
RNA_helicase
RCF1-5-like_lid
BRCT_2
AAA_7
AAA_6
AAA_11
Motif
Other DBs
NCBI-GeneID:
123663084
NCBI-ProteinID:
XP_045453780
LinkDB
All DBs
Position
2:4223584..4236709
Genome browser
AA seq
1019 aa
AA seq
DB search
MSRDIRSFFTVKKEKKAKDEDSDVIPESPNVQIIQKKKPNRKRRQIKDDSDEEIFTSKKK
IQSPPKAKLKEVKPTELFGSAPIKRTEPLVKKSKKKTEIAIHSDEEFEQSLLQIDEINCI
ENEKKTPEKNQVNNIKKNGTKSTQNHDSINNKISKPSPKKSPKPSSKRKLDTSIDVKKEI
ETIPKQIEKSCADFSEFVNDEEHDDNDQSSVPKSKKFKMDKSLNESVLSDEERHERKRYS
AALYQKYLNRSGPKHLGSKEIPEGAPNCLKDYAFLLTGVLDSFERDEIVAAITKYGGCVK
SGISKKVTHVLAGEDAGPAKLAKAQELGIKIISEDEFLSVIKDSTNKKHSPRDKKPSHNE
NKRSDKKSNENKNESSTKRNKKSPKSEEKNKITVNKIKKESLSPKKNVSKEIVKSDERKV
KSEDTKSKSEIIEKSVQSGNKLNGEFSKSSSSIDASNALMWVDKYKPQNLKQIIGQHGEA
SNVKKLLNWLTKWYANRKAKLPKPNPWAKNDDGGYYKAALLSGPPGVGKTTTVSLVCKEL
GFDMVEFNASDTRSKNLIKDQISDLLTTTSLSGYAKGNSGKGAVTKKHVLVMDEVDGMAG
NEDRGGLQELISLIKSTSVPIICMCNDRNSEKMRTLVNYCYDLRFTRPRLEQIKAAMMSI
CFKEGLKLPGDALSQLITASGNDVRQTLHRLALCAASPHVCSDASSVRKDVKTSPWEAIR
KVFSSEEHKGMSLNDKSDLFFSDYSLAPLFVQENYLNVAPHCPKQEILERISKAAESISI
GDIIDAKIRGQQAWSLLPLQAMYSSVIPGNILEGHVAGQIQFPSWLGKNSRKNKMHRLCQ
EIHAHTRLSTSGSKSSIYLDYAYHLRDAVVNPLIKDKADGIEKSLDVLESYHLLREDLDS
LVELSLWPGQRNPTILIDSKVKAAMTRTYNKKATALPYAPATVKKGSKVAQEDTEYSQED
EEQASEDSDPENDALIKKKKNKETEKPSSSKTSKGKQNEASSPTKGKGKKTAPKGGKKK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggatataagatcatttttcacggttaaaaaagaaaagaaagcaaaagacgag
gatagtgatgttataccggaatcaccaaatgttcaaattatacaaaagaaaaaaccaaat
agaaaacgcagacaaatcaaagatgactcagatgaggaaatttttacatctaaaaagaaa
attcaatcacctccaaaggcaaaacttaaggaagttaaacccactgaattatttggcagt
gctccgataaaaagaacagaaccattggttaaaaaatcaaagaagaaaacagaaattgct
atacattcagatgaagaatttgaacagagtttattacaaattgacgaaataaattgcata
gaaaacgaaaagaaaacaccagaaaaaaatcaagtaaacaatattaaaaaaaatgggaca
aaaagtactcaaaatcatgactcaatcaataataaaatttcaaaaccatcaccaaaaaaa
tcaccaaaaccatcatcaaagagaaaattggatacaagtattgatgttaaaaaagaaatt
gaaacaattcctaaacaaatcgaaaaatcttgtgcagatttcagtgaatttgttaacgat
gaggaacatgacgataatgatcaatcaagtgtaccaaaatcaaagaaattcaagatggat
aaaagtcttaatgagtctgttctttcagatgaagaaagacatgaaaggaaacgatactct
gctgctctttaccaaaaatatttgaacagatccgggcccaagcacttagggtctaaagag
atacctgagggtgcaccaaattgcttaaaggattatgcgttcctactgaccggtgtccta
gattcgtttgaacgtgatgaaattgttgctgccattacaaagtacggaggctgtgtgaag
agtggcatcagtaaaaaggtaacacatgtcttagccggtgaagacgccggtccagctaaa
ttagcgaaagcacaagagctcggcataaaaatcatcagtgaagacgaatttctatcagtc
ataaaagattcaactaataaaaaacattcgcctagagacaaaaaaccatcacataatgaa
aataagagaagtgacaaaaagtcaaatgaaaataaaaatgaatcaagtaccaaaagaaat
aaaaaatctccaaagtctgaagaaaagaataaaatcactgtaaataaaattaagaaagaa
tctttatcaccgaaaaagaatgtaagtaaggaaatagtgaaatcagatgagagaaaagta
aagtcagaagatacaaaatctaagtctgaaataatagaaaaatcggttcaatcaggaaat
aaacttaatggtgaattttcaaagtcaagtagttcaatagatgcttctaatgcactaatg
tgggttgataagtataagccgcagaacttgaaacagatcatagggcagcatggagaagcc
agcaatgttaaaaagttattaaactggttgacgaaatggtatgcaaatagaaaagcaaaa
ctgccaaaacccaatccgtgggcaaaaaatgatgatggaggatattataaagctgcactg
ttgtccggaccaccaggagttggtaaaacaaccacagtgtcgctagtgtgcaaggagtta
gggttcgacatggtagagttcaacgcctcggacaccaggagcaagaaccttattaaggac
cagatcagtgatctgttgaccactacttccctgtcgggttatgctaaaggtaacagtggc
aagggcgcggtgacaaagaaacacgttctagtgatggatgaagtggacggtatggctggg
aacgaagatagaggtggtctccaagagttaatatcgctgatcaagtctacatcagtgccg
attatatgcatgtgtaatgaccggaatagcgagaagatgcggaccctcgtcaactactgc
tacgacctaagattcaccaggccgcgactggaacagatcaaggcggcgatgatgtcgata
tgcttcaaagaaggtctgaagctccccggagacgctctgtcacaactaatcacagcgtca
ggtaacgacgtgcgacagactctacaccgcctggcgctgtgtgctgcctcgccgcatgtc
tgcagtgacgccagctctgtgaggaaggatgtcaagacgagtccgtgggaggccatccgc
aaggtgttcagctcggaggaacacaagggaatgtcgctgaacgacaagagcgacctgttc
ttcagtgactacagcctcgcacctctctttgtacaggaaaactatctaaacgttgcgccg
cactgccctaagcaagaaatcttagaaaggataagtaaagcagctgagagtattagtata
ggagacataatagacgctaagataagaggccagcaagcctggagtttgctgccattgcag
gcaatgtacagcagcgtgataccgggtaacattctagaaggtcacgtagctggacagata
cagtttccatcgtggctcgggaagaactctagaaagaataaaatgcatcggctctgtcag
gagatacatgcgcataccagactgagtacatcaggctctaaatcttcaatatacctggac
tatgcataccatctccgagatgcagttgttaatccattgataaaagataaagcagacggc
atagaaaagtccttagatgtactggaatcttatcatcttttaagagaagatctagattcg
ttggtggagttatctctgtggcccggtcagaggaatcctacgatactgattgattcaaag
gtaaaagcagccatgacgcgtacatataataagaaagcgaccgccttaccttatgcaccg
gcaactgttaagaaaggcagtaaggttgctcaagaggatacggaatattctcaggaagat
gaggagcaggcgtcagaagatagtgaccccgagaatgatgcgcttataaaaaaaaagaag
aataaagagacagaaaaacccagtagtagtaaaacaagtaaaggaaaacaaaatgaagca
tccagtcccactaaagggaaaggcaaaaaaactgcccctaaaggtggcaaaaagaagtaa
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