Melitaea cinxia (Glanville fritillary): 123663227
Help
Entry
123663227 CDS
T09237
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123663227
03016 Transfer RNA biogenesis [BR:
mcix03016
]
123663227
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123663227
Spliceosome [BR:
mcix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123663227
Transfer RNA biogenesis [BR:
mcix03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123663227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
CMS1
PGK
Motif
Other DBs
NCBI-GeneID:
123663227
NCBI-ProteinID:
XP_045453877
LinkDB
All DBs
Position
20:complement(3237641..3249440)
Genome browser
AA seq
731 aa
AA seq
DB search
MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQEGKTGKVVAATSTEWTMSLFDRTDALAVTPDGLRCQSRDQNGWHGCRA
TKGIHTKGAYYYEAIVTDEGLCRVGWSTQAARLDLGTDNFGYGYGGTGKKSNAKNFEDYG
TAYGKNDVIGCLLNLNTGEISFTKNGEDLGVAFNLNQSRRCDCYFPAVVLKNAEMSFNFG
KIPFVYPPKGDYIAICQAPKEFVKQNVVSAVASTGIKQVNNAPQAIIIEPSRELAEQTCS
QITLFKKYLNNPKVRELLVVGGINVKDQINQLNSGVDIVVGTIGRLEDLIQGGYLALTHC
RFFVLDEADGLLKAGCGESIERLHRQIPKITSDGRRLQMVVCSATLHAFEVKKMAEKLMY
FPTWVDLKGEDAVPETVHHVVVNVDPQRDRLWETLRRQIQTDGVHAKDNIRSGNTTPETL
SEAVKILKGEYVLRAIQEHKMDRAIIFCRTKLDCDNLERHLRGAGGAGGELSCVCLHGDR
KPQERKHNLEQFKRAQVRFLICTDVAARGIDVSGLPFMINVTLPDEKSNYVHRIGRVGRA
ERMGLAISLVSTVPEKVWYHGEWCSSRGRNCWNTNLVSDRPKGCCMWYNEPQYLADIEDH
LNITIQQIEPDMKVPSNEFDGKVVYGQKRTQVGTGYQDHVSQMAPVVKSLQELESQAQMY
YLKMHHKVAVA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattcgaagaatttggtgttttgcccgaaatagggaaagctatagaagaaatg
gactggacgcttccaactgatgtacaagccgaagctattccacttattctcggtggtggt
gatgtccttatggctgctgagaccggtagcggaaagaccggtgctttctgccttccaata
ttacaaatagtttgggaaacattaaaagacatacaagaaggaaagacaggtaaagttgta
gctgcaacttcgacggaatggacgatgtcgttattcgaccgtacggatgcactggctgtc
actccagatggtttgcggtgtcagtctcgagatcaaaacggatggcatggctgcagggcc
acaaagggtattcacacgaaaggagcttattattacgaagctatagttacggatgagggc
ttatgtcgtgtagggtggtccactcaggctgcccgactagatctaggcacagacaacttt
ggctatggttatggtggtacaggaaagaaatcaaatgcaaaaaattttgaagactatggc
accgcatatggaaaaaatgatgttatcggttgtctcctaaatctgaataccggtgaaata
tctttcacaaaaaatggtgaagatttaggcgtggcatttaatctgaaccagtcacgtcgc
tgcgattgctacttccccgctgttgttttaaaaaatgcagagatgagcttcaactttgga
aaaataccatttgtgtatcctcccaaaggagattacatagcaatctgccaggctccaaaa
gaatttgtgaaacaaaatgttgtgtcagcagtagcgtctactggaataaagcaagttaac
aacgctccccaggcaatcattattgagccatcaagagaattagcagaacaaacctgctca
caaataacactattcaaaaagtaccttaacaaccctaaagtgagggaactgcttgttgtc
ggcggtattaacgttaaggatcagatcaaccagttgaactccggtgtagacatagttgtg
ggtactattgggcggcttgaagaccttattcaaggaggttatttagctttaactcattgt
cgcttcttcgtactggacgaggctgacggtctcctgaaggccggttgtggtgagtcaatc
gagagactgcatagacagataccgaagattacatcagatggccggcgcttacaaatggtc
gtctgttcggcgacactacacgctttcgaagttaagaaaatggcggagaagctgatgtac
ttccccacgtgggtggacttgaagggcgaagacgcagtcccggagactgtccaccacgtg
gtcgtcaacgtggacccccagcgagatcgcctctgggagacgctccgcagacaaatacag
actgatggtgttcacgcaaaagacaacattcgtagcggaaatactaccccagagacactg
tccgaagcggtcaagatactaaaaggagaatacgtactcagagccattcaagaacacaaa
atggacagagcgataatcttctgccgcacgaagctggactgcgacaacctggagcggcac
ctgcgcggcgcgggcggggcgggcggcgagctgtcgtgcgtgtgcctgcacggcgaccgc
aagccgcaggagcgcaagcacaacctggagcagttcaagcgcgcccaggtgcgcttcctc
atctgcaccgacgtcgccgcgcgcggcatcgacgtgtccggcctgcctttcatgatcaat
gtcacgttgccggacgagaaatcgaactacgttcatcgtatcggtcgcgtgggtcgcgct
gagcgtatggggctcgccatcagcctcgtgtccactgtgcccgaaaaggtgtggtaccac
ggcgagtggtgttcctcgcgaggtcgcaactgctggaacaccaacctggtgagcgaccgg
cccaaaggttgttgcatgtggtacaacgagccccagtaccttgcggatatcgaagatcat
ttgaacatcacaatccaacaaatagagcccgacatgaaggtaccgagcaatgagtttgat
ggcaaagttgtttacggacaaaaaagaacgcaagtcggaaccggatatcaggatcacgtg
agtcagatggcgccggtggtgaaatcactacaagaattagaatcccaagcacaaatgtat
tacttgaaaatgcatcataaggtcgcggtggcttaa
DBGET
integrated database retrieval system
