Melitaea cinxia (Glanville fritillary): 123663370
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Entry
123663370 CDS
T09237
Name
(RefSeq) LOW QUALITY PROTEIN: cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123663370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcix02000
]
123663370
Transporters [BR:
mcix02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
123663370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
MMR_HSR1
Imm_superinfect
Motif
Other DBs
NCBI-GeneID:
123663370
NCBI-ProteinID:
XP_045454015
LinkDB
All DBs
Position
20:13212742..13278957
Genome browser
AA seq
1853 aa
AA seq
DB search
MSDPNGGLGTRDDGRRTPASTEQLTKCEKEPDCVAIGSRLRGPMGTRPPAAFWPQLWATV
VRNLLLKKRDTRKTLAEVLVPLYSLGVLIFLKMLMPNPNFPEVSKPGRLLRIHHDAISEN
HSVAVVADWENANGTLGFLDDINSMLIESNQHPINWIKYNNTTELNDAYHNDAKHFPLAV
IFHTDPGAYGEPLRYTIRTNPSRDGGTPSTRTLTTSPAKCRERTGFKDWSSDWSRGQLIP
LSEMHREDTCPVLQYYYTGFLALQTLIDYVKIKMDTGTRFFPPRVDLRQFPKRQHTGDWL
VIFRVIMPMYMVMTLSQFITYLLMFVVGEKEKKIREGMRIMGLKDSVYWGSWFLIYAVFV
TILSLVSTVLLFTLKVFQHSSYILIFLLMLLFGFTIITFAFMLTPFFDKARTAGILGSFA
VNLMSALYFIQVFVSNADSLAFWFVSLISSSCYALAMDKALVLDMAGVGVTWDNLWSGPG
VPFGGSLIMMAVDTVLYGLAAYWLDAVVPSEYGIKQKPWFCLLPSFWFGRRARVCDHLHS
NGDVNNKDVEPVPKELQDKEAIRIVGLQKSFRHCRRPEVKAIDGIDLSIYEGQITAVLGH
NGAGKSTLFNILTGLTAPTAGTAYVYGLDVRDPNDMHEIRQMIGVCPQQDVLFDLLSVKE
HLQFFAAVKGIPRRRIPDEVHKAMSEVGLLEQAAMFSKHLSGGQKRKLSIAIAFIGDPKI
IILDEPTAGVDPVSRRQTWRILQRARRGRVLLLTTHFMDEADILGDRKAVISKGRVRCAG
TSLFLKNKFGIGYHLTLVLDGACREHQITRLVRGHVPRAEKARRHGRELSYILPHYAVHL
FPPLFHAIELEIRDKTNRLGITSYGVSMTTLEEVFLSLEGENAEETEAVEGVSSVKLVRA
RALSRSLSLQSKTLSYQELNDKDQQNTTSLPTPPASHALHSTTHGIEHVKVTPEVPVSVD
VLGETVKTNPSCWRTFCALVYIRTVRMIRDPYKLYVMIFMPIISCALGLYMKSRQIVFFR
MQPLKLDPNAYFNKTPIALYSEQDNFKEIMDFKDSLETLGAHPIDQFDGNFSSLLDMENF
GAFSLNYSLVPFGKIMAYYNSTYTHSLPIIINLLDNSIYRVLMSASDQLDSFKPIEVLTH
PFQQTEQQEEFNLGNMVCAIFMGMIFALVPVTLAVDIVYDREIKAKNQLRVNGLSMSMYF
LTYFTILIFIMIVTSAGVLVLVILNDIPSLTNGSAITMLSGLLLLYSPSAILFNTCLSYI
FDKMDSAQSIMPNITTWVGVIPFILVAVLDTFKWGSDIAFYLHLVFSFLDVMYIPYAIIY
YVDRVYVTCNLRGLCTVPSLSSYFTAEVWVLIVAMLVHVPVCGAALLAADRLKSGGRICP
GGAPQRDDGEAEAGGEASEDDDVRRERRRVAALLHARDRAAPALLVHNLRKEYKLRGDRS
NAACCGGGEALRRAALARLSLAVQGGEVFGLLGHNGAGKTTTMKIITAEERLTCGTVMLG
GQNIEEAQSSAFQMLGYCPQHDALWKNVTIREHIECYAAIRGISKADTPRIVEAYLQGLQ
IAEHAGKNAEECSGGTRRKLSFALAMVGSPRVVLLDEPSTGMDPRSKRFLWDTILASFQG
RKGAILTTHSMEEADALCSRVGIMVKGGLRCIGSTQHLKNLYGAGYTLEMKIGQQNQKPT
MMDSDISLSPSPLRSANHSPSLGEADEGNAXLLLVGSGDGSPTVEGDVEGEGEGEGEGET
VDVSIHTPLVGNTPSVRLHHQRTESSGGARSEAAIALVAQLFPAAVLEESFAERLVFSVP
QRSVSSLASCFQQIEDAKEKLNIVEYSFSQTTLEQVFLKFAQSENVESSDQEH
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcccaatgggggcctgggtacgcgggatgatggacgccgtacgccggccagc
accgaacagttaacaaaatgcgagaaggagccagactgcgtggcgataggtagcagactg
cgcgggccgatgggcacccgtccgcccgcggccttctggccgcagctgtgggccaccgtc
gtcaggaatctgctgctcaagaagcgggacactaggaagaccctcgctgaagttctcgtt
ccgttatactctctgggcgtgctgatattcctcaagatgctgatgccgaatccaaacttt
cctgaagtcagtaaaccgggtaggctactgaggatccaccacgatgccatatccgagaac
cattccgtcgctgtggtggccgattgggaaaacgctaatggaacactgggttttctagac
gatatcaactcaatgctcatcgagtccaaccaacacccaatcaattggatcaaatataac
aacacgactgagctaaacgacgcttatcacaatgacgcaaaacattttcctctcgcagtt
attttccatactgatcctggtgcttatggcgaaccactcagatacacaatacgcacgaat
ccctcccgcgacggaggaacgccttccacacgaactcttacgacatcaccagctaaatgt
cgagagaggactggcttcaaggactggtcctcggactggtcgagagggcaactgatacct
ttgtcggaaatgcacagagaagacacatgtcctgttctccagtattactacacaggtttt
ttggcgctgcagactttgattgattatgttaaaatcaaaatggacacagggacacgtttc
ttcccacctcgagtagacttacgacaatttcccaaacgtcagcacacaggcgattggctg
gtgatattcagagtgatcatgccaatgtatatggtgatgacgctctcacagttcatcacc
tacctcctgatgtttgtggtgggggagaaggaaaagaaaatacgggaggggatgaggatc
atgggattgaaggatagtgtttactggggatcgtggtttttgatatatgctgttttcgtt
acaatcctctcccttgtcagtactgttttactctttacgttaaaggttttccaacattcg
tcttacatcttgattttcctgttgatgcttctgtttggatttacaatcataaccttcgcg
tttatgctcacgcctttcttcgacaaagctaggactgctggaatcttgggtagcttcgcc
gtgaacctgatgagcgctctgtacttcatccaggtttttgtctccaacgctgactctctt
gccttttggttcgtctctcttatcagttccagttgttatgctcttgctatggacaaggca
ctagtgttagacatggcgggagtgggagtgacctgggacaatctttggagtggaccgggg
gtgccatttggaggcagtcttatcatgatggcagtggatacagttctttatggcctcgct
gcatattggctggatgctgtagtacctagtgagtacggcatcaagcagaagccgtggttc
tgcttgctaccatcattctggtttggaaggcgagcgcgcgtgtgcgatcaccttcactcc
aacggagacgttaacaacaaggacgtcgaacccgtgcccaaagaattacaagacaaagag
gcgatcaggatcgtaggtctgcaaaagagtttccggcattgtcggaggccagaagtgaaa
gctattgatggtatcgacctgagtatatatgaaggacagatcactgcagttcttggacat
aacggcgctgggaaatctaccctttttaatatccttactggtcttactgctccaactgca
ggaactgcttatgtatatggtttagatgtaagagatccaaacgacatgcacgagatccgt
cagatgatcggcgtgtgtccgcagcaggacgtcctgttcgacttgctctccgtaaaagaa
catttgcagttctttgctgctgttaagggcataccacgacgaagaatacctgatgaagtc
cacaaggcgatgtcagaagtcggactcctggagcaagcggcaatgttctcgaaacacctc
tctggtggacaaaagaggaaacttagtatagctatcgcgtttataggtgacccaaaaata
ataatcctggacgagccgacagcgggcgtggacccagtatcgcggcgccagacgtggcgc
atcctgcagcgcgcgcgccgcggccgcgtgctgctgctcaccacgcacttcatggacgag
gccgacatcctgggtgacaggaaggccgtcatcagcaagggacgggtgcggtgcgctgga
acgtcattgtttttgaaaaacaagtttggaataggatatcatttaacgttagttttagat
ggcgcgtgccgcgagcaccagatcacgcggctggtgcgcgggcacgtgccgcgcgcggag
aaggcgcggcgccacggccgcgagctgtcctacatcctgccgcactacgccgtgcacctg
ttcccgccactcttccacgccatcgagctcgagatacgcgacaagaccaaccgcctcggt
ataacaagctacggggtatcgatgacaacgttggaggaggtgttcctcagcttggaagga
gaaaacgcggaggagacggaggcggtggagggcgtgtcgtcggtgaaactagttcgcgcg
cgcgctctatcacgcagtctttcgctgcagagcaagaccttaagctaccaggaattgaac
gataaggaccaacaaaacacaacatctctgcctacgccgccggcatcgcacgcgttgcat
tccaccactcacggcattgagcatgttaaggtaacaccagaagtccccgtatcagtggac
gtactgggtgaaacggtgaaaacaaacccgtcgtgttggagaacattctgcgcactcgtg
tacatccgtaccgtcaggatgatacgggacccctacaagctttatgtgatgatcttcatg
cccatcatttcctgtgccctaggtctctacatgaaatcgcgtcaaatcgtcttttttcgt
atgcagccgctcaaattggatcctaacgcttatttcaacaaaacaccaatcgcattgtac
agtgaacaggacaattttaaagaaatcatggattttaaagattcattagaaacactagga
gctcatcccatagatcagtttgatggaaacttctcgagtctcctagacatggagaacttt
ggagcgtttagtttaaattacagcctagttccctttgggaaaatcatggcctactacaat
agcacttatactcatagcttgcctattattataaacttattggacaatagcatatacagg
gtattaatgtcggcctccgatcagctggacagttttaaacccatcgaggtcctgacccat
ccgttccagcagacagaacagcaagaagaattcaatttggggaatatggtctgcgccatc
tttatggggatgatctttgctctggtcccggtgactttggctgttgatatcgtgtatgat
cgagagataaaagctaagaaccagttacgcgttaacggcctctcgatgagcatgtacttc
ttaacgtacttcactatacttatcttcatcatgatcgtcaccagcgccggggtgttggtt
ctcgtaatcctcaacgacataccgagcctcacaaacggttccgcgatcacgatgctctcc
ggcctgctgctgctgtacagcccttctgccatcttgttcaacacgtgtctctcctacatc
ttcgataagatggactccgctcagagcatcatgcccaacatcaccacttgggtcggcgtc
atccccttcattcttgttgctgttttagatacttttaaatggggtagcgacatcgccttt
tatcttcacttagtgttcagttttctagatgttatgtacataccgtatgccatcatatat
tatgttgatagggtgtacgtgacgtgtaacctgcgcggcctgtgcacggtgccgtcgctg
tcgagctacttcacggcggaggtgtgggtgctcatcgtggccatgctggtgcacgtgccc
gtgtgcggcgccgcgctgctggcggccgacaggctcaagtccggcgggaggatatgtccc
ggcggtgcgccacagcgcgacgacggcgaggcggaggcgggcggagaggcgagcgaggac
gacgacgtgcgccgggagcgccgccgcgtcgccgcgctgctgcacgcgcgcgaccgcgcc
gcgcccgcgctgctcgtgcacaaccttcgcaaggagtacaagctacgcggagaccgcagc
aacgcagcgtgctgtggaggcggtgaggcgctgcggcgcgctgcgctggcgaggttatcg
ctggccgtgcagggcggggaggtgttcggcctgctggggcacaatggggccgggaagacc
accaccatgaagattatcacggctgaggagcgcctcacctgtggcacggtaatgcttggc
ggtcagaatatcgaggaggcgcagtccagcgcgttccagatgctcggctactgtccgcaa
cacgacgcgctctggaagaacgtcaccatccgcgagcacatcgagtgctatgcagccatt
cgagggatcagcaaggcagatacccccaggatagtggaggcgtacctgcaggggctacag
atcgcggagcacgccggcaagaacgcggaggagtgctcgggcggcacgcgccgcaagctg
tcgttcgcgctggccatggtgggcagcccgcgcgtcgtgctgctggacgagccctccacc
ggcatggacccgcgcagcaagcgcttcctctgggacaccatcctggcgagcttccagggt
agaaaaggtgctattttgacaacacattccatggaagaggctgacgctttatgttctaga
gtcgggattatggtgaagggaggtttgaggtgtattgggtcaacacaacacttgaagaat
ttgtacggcgcaggttacacgctagagatgaagataggtcaacaaaatcagaaacctacg
atgatggactcagatatatcattgtcaccgtcccctctacgatcagcgaaccattcgcca
tcactgggggaggcagatgaaggtaatgcctaattattgcttgtagggtcaggagacggt
tcacctacagtggaaggggatgtcgagggggagggggagggagaaggagagggggagact
gtggacgttagtatacacacgccgctggtaggcaacacgccatctgtacgtctgcaccat
caacgcacggagtcgagcggcggcgcgcgctcggaggcggcgatcgcgctcgtggcgcag
ctgttcccggccgccgtgctggaggagagcttcgcggagcgcctcgtgttctccgtgccg
cagcgctccgtctccagcctggccagctgcttccagcagatcgaggacgcgaaagaaaaa
ctgaacatcgttgaatatagcttcagtcagacgacgctagagcaggtgttcctgaaattc
gcacaatccgagaacgtcgaatcttcagaccaagaacattag
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