KEGG   Melitaea cinxia (Glanville fritillary): 123663681
Entry
123663681         CDS       T09237                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
mcix  Melitaea cinxia (Glanville fritillary)
Pathway
mcix03030  DNA replication
mcix03410  Base excision repair
mcix03420  Nucleotide excision repair
mcix03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123663681
   03410 Base excision repair
    123663681
   03420 Nucleotide excision repair
    123663681
   03430 Mismatch repair
    123663681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcix03032]
    123663681
   03036 Chromosome and associated proteins [BR:mcix03036]
    123663681
   03400 DNA repair and recombination proteins [BR:mcix03400]
    123663681
DNA replication proteins [BR:mcix03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123663681
  DNA Replication Termination Factors
   ELG1-RFC complex
    123663681
Chromosome and associated proteins [BR:mcix03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123663681
DNA repair and recombination proteins [BR:mcix03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123663681
  Check point factors
   HRAD17(Rad24)-RFC complex
    123663681
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_22 AAA_30 Mg_chelatase AAA_24 RuvB_N bpMoxR AAA_11 Rad17 Gp44_lid SLFN-g3_helicase AAA_5 AAA_3 AAA_19 DUF815 nSTAND_NTPase5 AAA_assoc_2 AAA_25 INTS1_INTS2-bd AAA_7
Other DBs
NCBI-GeneID: 123663681
NCBI-ProteinID: XP_045454307
LinkDB
Position
2:complement(7282362..7285034)
AA seq 350 aa
MQAFLKTGKISNADKPSSSGTKAVKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRECLAG
GDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKAFSQL
TASNKRPDGRPCPPYKLVILDEADSMTSAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLQEVCEAEGVDVGNGDILQDAVDTCEGDLRRALTALQCC
QRLIGKITPEGLIEVTGLVPQELVDKFLSTKNYSELEAFVESFLMDAYSASQLLEQLSAT
VVQSGHLTNKQKCTISEKIAVCSHRLLDGGAEVMQLTDLGCTIIMANNDP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaggcatttctcaaaactggtaaaatttcaaacgctgataaaccttcatcatctggc
actaaagcagtgaaaaagaaaccgccagcgccctgggttgaaaaatatcggccgaaaacc
atcgatgatattgtcgatcagggagaagtcgtgcaagttcttcgcgaatgtttggcgggt
ggggacctacctcacttattgttttacggaccgccaggaacaggcaaaacgagtgcaatt
ctcgcggcggcgcggcagctgtttggggacattactcgtgatcgtgtccttgaacttaac
gcatctgatgagcgcggtattcaagttataagagacaaagtcaaagcattttctcaatta
acagccagcaataagagacccgacggaagaccatgtccaccttacaaattagtgatatta
gacgaagcagactcaatgacatcagcagcacaggctgcattgcgtcgtactatggaaaga
gagacacgcacaactagattttgtctcatatgcaactatgtgtccaggattatacctcca
atcaccagtagatgttcgaaatttaggttcaaaccactcgcaagagaaaatgttatcaaa
agattacaagaagtatgtgaagcagaaggcgttgacgttggcaatggtgatatactgcaa
gatgcagttgatacgtgtgagggggacttgcgtcgtgcacttactgctttacaatgttgc
cagcgattaattggcaagattacccctgaaggattaatagaggtaactggtcttgttcct
caagaattggttgataagttccttagcactaaaaactacagtgagttggaggcatttgtt
gaaagtttcctaatggacgcatactcagcatcacaattattagaacagctaagcgctaca
gtggtccaaagtggtcatcttaccaataaacagaaatgcactataagtgaaaaaatcgcc
gtttgctctcatcgcttactagatgggggtgcagaagtcatgcaacttactgacttaggt
tgcactatcattatggcaaacaacgatccttaa

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