Melitaea cinxia (Glanville fritillary): 123665515
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Entry
123665515 CDS
T09237
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcix03036
]
123665515
03400 DNA repair and recombination proteins [BR:
mcix03400
]
123665515
Chromosome and associated proteins [BR:
mcix03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
123665515
DNA repair and recombination proteins [BR:
mcix03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
123665515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
HEAT_RRP12_N
SCD
CandA_N
Motif
Other DBs
NCBI-GeneID:
123665515
NCBI-ProteinID:
XP_045455764
LinkDB
All DBs
Position
24:complement(5024489..5049891)
Genome browser
AA seq
1190 aa
AA seq
DB search
MAEIVYPQGCRPITDDLGPDELVRRLKALAHTLQGLGQDEGMYQQYIPLALHLADEFFLT
HPSRDVQLLIACCIADVLRVYAPEAPYKDQEQVKTIFLFLINQLQGLRDPKDPAFKRYFY
LLENLAYVKSFNMCFELEDCQEIFCALFSLMFKIVNTEHSSKVKSFMLDVLCPLITESDV
VSNELLNVILVNLVEPNKREHKHAYSLAKELIVKTSETLEPYIQAFFNHVLILGKEEKNL
LIFSKVYELIYELNQCCPSVLLSVLPQLECKLKSAHFQERLSAVALLARMFSEPGSNLAQ
QYPALWRAFLGRFNDISVQIRIKCVQYCMHFLVHHPHLRKDITETLKLRQHDAHEQVRYE
VVMAIIATAQRDFQAVAESEDLLHFVRERTLDKKFKIRKEAMSGLAMIYKKFLTEESVPP
ATEKAVQWIKDKILHGYYMTALEDRLLVERLLNTSLVPYTLPPAVRMKKLYYLMSNVDDN
ATKAFIELQKHQLAVRRTVAEWIELHRKPPTPAVQKEMIAKVLHISSKFLPESVKAQEFL
NKFSTHMQSLPELLQGMETILNPNVSCEVCVRTTSNVLKKLGQPVMTNLYYNTVKMLLER
VSSVMVDHDSLLILVGYVEGAVRGTDLSIAEECGIDIEKAAERGLKLLVMLSFVFPAHFL
HEDVLHRLTSLLELDDESVAPHILAALTFLGKYRPLSEACPALFPKLITLCKAYAEVGTP
KQAKNAVRCLFVNVPDQRTAIFTEILETLKSTLSPHSEHYRTAIVTLGHIAHNLPDNFPV
HIKNIVSRKIVKELLVREGGGGPNAPEGDWCPEEELPEETRCKLEGLKCMARWLLGLKKD
ELSAQKTFRMLNAFIVHKGDLLQQMQVSKAEMAHLRLAAGAAMLKICEQKGVGDQFTADQ
FYNLSHLMVDEVPQVREGFAAKLHKGLSKGIPNKCLPLDFMGVYALAGREPDRRIRGIIR
QYMLADVVRRREYVRNITIGTKVERAVSQLPHILPDYMMVFAVPVLAHDPAFTAYDNVAQ
LKVVKQCLWFVLEPLITRNDFYCYGFYKSLVERMKNHKDALNETDDAMNYKLWATCDLAM
SVIWARSTSFELRDFPTDARIPTMYFAPQPDFFINTRVFLPPELQFQPKRQPVAPEVVPR
ARKRARTTDTLDNVNDVEPSEASETQIILPGIEQPPETELEEPQVKRAND
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatagtgtacccgcaaggctgccgcccaatcaccgatgaccttggaccagac
gagctcgttcgaagacttaaggccctggctcacaccctccagggtctgggtcaggatgag
ggcatgtaccaacagtacataccgcttgccctccatttggccgacgagttcttcctaacg
catccctcccgcgatgtccagttgctcatcgcttgctgcatcgctgatgtactcagggtt
tacgccccagaggctccatataaagatcaggaacaggtgaaaacaatattcctgtttctt
ataaatcagctacaaggactccgagatccaaaggacccggcgttcaaacgctacttttat
ttacttgagaacttggcgtatgtaaagtctttcaacatgtgttttgagttggaagactgc
caggaaatattctgcgctttgttctctctcatgtttaagattgtcaatacggaacattca
tcaaaggtcaagtctttcatgctggacgtcctctgtcccctcatcactgagtcggacgtg
gtctccaacgagctcctcaatgtcatactcgtaaacctagtggagccaaacaaacgtgaa
cacaaacacgcctattcgcttgctaaggaactaattgtgaagactagtgaaacattggaa
ccttatatacaggcgttcttcaatcatgttttaattctgggaaaggaagagaagaatctt
ctgatattctctaaagtgtatgaattaatatacgagttaaatcaatgttgtccttcagta
cttctgtcagtactgccacagttagagtgtaaacttaagtctgctcattttcaagagcga
ctgagcgcagtggcactactcgctagaatgttctctgaacctgggtcgaatcttgcccaa
caataccctgccttatggcgagcattcttaggacgcttcaatgatatatccgtacagata
aggatcaaatgtgtccaatattgcatgcatttccttgttcaccatccacatttaagaaaa
gatataactgaaactttaaagttgagacagcatgatgcccacgaacaagtgcgttacgaa
gtagtgatggcaattatagcaacggcccagagagacttccaagcggttgcggagtcagag
gatctcctacattttgtacgtgaaaggacattggataaaaagtttaaaataagaaaagag
gcgatgtcagggctagcgatgatatataagaaattcttaacggaagagagcgttccaccg
gccactgagaaagcggttcagtggatcaaagacaaaatacttcacggttactatatgacg
gctttagaagatagattgctggttgagagacttttgaacacatcactcgttccgtacaca
ctaccccctgcagtaaggatgaagaaactgtactatttaatgtctaatgtggacgataat
gctacgaaagcgttcatagaactacaaaagcatcaactggcagtaagacgtacggtagct
gaatggatagagttgcatagaaaacccccaacacccgctgtccaaaaggaaatgattgct
aaggtcttacacataagttccaaattcctgcctgagtcggtaaaagctcaagaatttttg
aacaaattttcaactcacatgcagtcgttgcctgaattattgcaaggaatggagactatt
ttaaatcctaacgtcagttgcgaagtttgtgttcggacgacgtcaaatgtccttaaaaag
ttgggccagccagtgatgactaacttgtattacaacacagttaagatgctattagaacga
gttagttctgtgatggtagatcacgactcgctactcattcttgtgggatatgtagagggc
gctgttagagggacggatctttctatagctgaggaatgcggtatcgatatcgagaaggca
gcggagcgcggactcaagctgttagtgatgctctcgttcgtgttccccgctcacttcctg
cacgaggatgtattgcatcgcctcacctcgctattggagctagatgatgaaagcgtggcg
cctcatatacttgccgctctcactttccttgggaaatatcgtccgctgagtgaagcgtgt
ccagcgttatttccgaaactgatcactttatgcaaagcatatgctgaagttggtacaccg
aagcaagctaaaaatgccgttaggtgcctgttcgtgaatgttccggatcagaggacagct
atatttacggagatcctggagacgctcaagagtactctgagtccgcattcagagcactat
cgcactgctattgtgactctaggtcacatcgctcacaatttgcctgataacttccccgtt
cacatcaagaatattgtctcgagaaagatcgtaaaagagctgttagtccgtgaaggagga
ggtggtccaaacgctccagaaggtgactggtgtccagaagaagaattaccagaagagact
cgttgcaagctagaaggcctcaagtgtatggctcgctggttgttaggcttgaaaaaggac
gagctatcagctcagaagactttcagaatgcttaatgcgttcattgttcacaaaggagat
ttattacagcaaatgcaagtgtcgaaggcggagatggcacacttacgtctcgccgccgga
gctgcgatgttaaagatatgtgaacagaagggtgtcggagaccagttcactgccgatcag
ttctacaatctgtcgcatcttatggtggatgaagtgccacaagtgcgagaaggttttgca
gcaaaattacacaaaggtttatcaaagggtataccaaacaaatgcctgccactagacttt
atgggtgtttacgcgctggctggtcgcgaaccggacagacgtatacgaggcatcatacgt
cagtacatgttagctgatgtcgtaagacgtagagagtatgtgcggaatataaccattggt
actaaagttgaaagagcagtgagccaattaccccacattttaccagactacatgatggta
tttgctgtacctgtactggctcatgatcctgcattcacggcttatgacaacgtagcacag
cttaaggtcgtaaaacaatgcctctggtttgtgctggagcctctgataacacgtaatgac
ttttattgctacggtttctacaagagtctggttgagaggatgaaaaaccacaaagatgct
ctcaacgagaccgatgacgctatgaattataaattgtgggcgacgtgtgacctggcaatg
tcggtgatatgggcgcgttcgacgagcttcgagctccgtgactttccgaccgacgcccga
atccctacaatgtacttcgcaccccagcccgacttcttcatcaacacgagggtcttcctg
ccgcccgagttgcagttccaacctaaacgccagccagttgcgccggaagtggttccccgt
gcaaggaaacgtgcccgaactacagacacccttgataatgttaacgacgtagagccatca
gaggcatcagagacacagataatactaccgggaatcgaacagccgccggaaaccgaatta
gaagagcctcaagtgaaacgcgctaacgactga
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