Melitaea cinxia (Glanville fritillary): 123666848
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Entry
123666848 CDS
T09237
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123666848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123666848
03009 Ribosome biogenesis [BR:
mcix03009
]
123666848
Enzymes [BR:
mcix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123666848
Spliceosome [BR:
mcix03041
]
Complex A
U2 snRNP components
U2 related factors
123666848
Complex B
123666848
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123666848
Ribosome biogenesis [BR:
mcix03009
]
Eukaryotic type
90S particles
Helicases
123666848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
AAA_22
DEAD
AAA_19
nSTAND3
SRP54
ABC_tran
AAA_25
T2SSE
Flavi_DEAD
AAA_7
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
123666848
NCBI-ProteinID:
XP_045456827
EnsemblRapid:
ENSMCXG00005001719
LinkDB
All DBs
Position
27:7959051..7976723
Genome browser
AA seq
736 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAAKSGSSSGETSDAVATLGTAPPPTATSTPGINQYTG
LPHSVRYHELLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWCVEFAAV
TGMKSHGVACTQPRRVAAMSVAQRVAEEMDVPLGQQVGYSIRFEDCSGPQTVLKYMTDGM
LLREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRTDLKLVIMSATLDAGKF
QQYFDNAPLMNVPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHICEEIAGDILLFLTGQE
EIEDACKRIKREIDNLGPDVGELKCIPLYSTLPPNLQQRIFEPAPPNRANGAIGRKVVVS
TNIAETSLTIDGVVFVIDTGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCF
VRPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNV
RQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQ
LHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELNNFPQCEARRQL
ELLQARLDSKAYQEGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaggagaatagaagttatggatccgtttattaaaaaaaagcgggaagaaaag
gcagcagcagcagcaaaatctggaagcagtagtggtgagacatcggatgcggttgccaca
ttgggaactgcccccccacccactgctaccagtactcctggaattaaccaatatacaggt
ttgccacattccgtgcgttatcacgagctcctgcgtcgtcgtctcggcctcccagtatgg
gaatacaaaaacgactttatgagactcctaaacactcaccagtgtgtcgtattagtcggt
gaaacaggttcaggaaagacaactcagataccacagtggtgtgtcgaatttgcagctgtc
acagggatgaaatcccacggagttgcctgcactcaaccaagaagagtagcggctatgtcg
gtagcccagagagtcgctgaagaaatggacgtgccgttgggtcagcaagtcggttacagc
attcgttttgaagactgctccgggccccaaacggtgctcaaatacatgaccgatggtatg
ttgctccgtgaagctatgtctgatccgatgctggagcaatacagagtgatactcctcgat
gaggctcacgagaggaccttagcgacagatatcctaatgggtgtattaaaagaagtgata
aaacagagaacagatttgaagctggttatcatgtcagcaactttagatgctgggaagttc
cagcagtactttgataatgctccgctgatgaatgtaccgggtagaactcatccggtagaa
atattttacactccccaaccagaaagagactatttagaagcggcgatacgtactgttata
cagatacatatatgtgaagaaatagctggtgatattttactcttcctcaccggtcaagag
gaaatcgaagacgcctgcaagagaattaagcgtgaaatagataatttgggaccggatgtc
ggcgaactgaaatgtattccgctatactcgacactgccacctaacctgcaacagagaatc
ttcgagccggcaccaccgaaccgagcaaatggggcgatcggtagaaaagtggttgtatcc
acgaacatagcggagacatccttaacgatagatggtgtcgtgttcgtgatagatacagga
ttctcgaagcagaaggtgtataatccaaggattcgtgtggagtctctgttggtgtcaccg
atcagtaaggcgtcggctcaacagcgggccggtagagccggtaggacacgtccggggaaa
tgttttagactgtatacggagaaggcttataagaatgaaatgcaagacaacacatacccc
gagattctgagatcaaacttaggatctgtagttttgcagttgaaaaagctgggaatcgac
gatctggtgcactttgacttcatggaccctccggcgcccgagaccctcatgagggccttg
gagcttctcaactacttagctgcactcgatgacgatggcaacctgacggacttaggagct
gtcatggcggagtttcccctggacccacagctggccaagatgttgatagccagctgcaac
cacaactgttctaatgaaatactatccatcactgctatgctttctgtaccacagtgcttt
gtacgtccaaacgaagctcgtaaagcggctgacgaggctaagatgaggttcgctcacatc
gatggcgatcatctcacacttctcaacgtgtaccacgccttcaaacagaatatggaagat
ccgcactggtgctacgataacttcatcaactacagatcacttaaatctggtgacaatgtg
cggcaacaactcagccggattatggacagattcaacttgaaacgtacaagcacagagttt
acaagtaaagactattacatcaatattaggaaggcactcgtcaacggtttctttatgcag
gtagcccacttagagcgcacaggtcattacctcacggttaaggacaaccaggtggttcag
ctacatccatccacctgcctcgaccacaagccagactgggtgatttataacgagtttgtc
ctcacgaccaaaaactatatacggacagttacggatatcaaacctgaatggctactcaag
atcgcaccccagtactacgaactgaacaatttcccacaatgcgaagcacggagacaactc
gaattactgcaggctcgtctggactcaaaggcttatcaagaaggcttctaa
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integrated database retrieval system
