Melitaea cinxia (Glanville fritillary): 123666949
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Entry
123666949 CDS
T09237
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123666949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcix04121
]
123666949
Enzymes [BR:
mcix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123666949
Ubiquitin system [BR:
mcix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123666949
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123666949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
zf-C3HC4_2
Beta-prop_TEP1_C
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_DCAF4
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_5
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_RFWD3
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_10
zf-C3HC4_4
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Zn_ribbon_6
Sina_RING
TRAF3_RING
DZR
DZR_2
WD40_like
Motif
Other DBs
NCBI-GeneID:
123666949
NCBI-ProteinID:
XP_045456918
LinkDB
All DBs
Position
27:8393648..8401913
Genome browser
AA seq
720 aa
AA seq
DB search
MSGAAASGASSAASALGGLGGSLEDKDCDLLCPVCFELIDEAYVTRCGHSFCYACIAKSV
ELHRRCPKCGAALAGRDHYFPNFLLNELVARRRLRSRPQVVSGPVAASPGPDAERLRALL
ASEARHLALPDVEGMLDVLTRRKRLLEAESAAAHHRLLYEFLAQLLRHRTHQLEQLSREA
ALVKKDMEHVAGVLRDLRSGATELGRLPSPSEPPSLSGSVRDVRPRLGELGETAPRSPPA
EEEESFASTGGGTGDALAARWRRLTAHFDDFVQCYFAHRADELYFPGSGSATPAPPGPPG
PPPAPPAGAARGAALADPVPQQASAPETRASSAAGDQRAPEGDPPPSSATVPPAPPVSGG
PPAPPVSGGPPGGGEGFGGLEAFREDLAAFTRYRALRPLATLSYCSDAINYSTIVSTIEF
DKDDEFFAIAGVTKRIKVFEFEAVVRDAVDVHYPVAEMQCSHKISCVSWNAYHKNVLASS
DYEGTVSVWDAGAGVRTRALQEHDKRAWSVHFNRADVHLLASGSDDARVKLWSLNAERSV
ATLEAKFNVCCVRFNPRSSCHLAFGSADHCVHYYDLRAPRAPLAVFRDHRKAVSYVKFVD
ARTLVSASTDSQLKLWRVESPRCVRSFTGHANEKNFVGLATDGRYVACGSENNALYVYYT
GLSRPLLAYRFDAVRGFLERERRDEEPAEFVSAVCWRRSADRPALLAANSQGTIKVLELV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagccgctgccagcggggctagtagcgcggcctcggcgttgggcggtctgggc
ggttctctagaagacaaagactgcgatcttctctgcccggtctgcttcgagctcatagac
gaggcctacgtaactcgatgcggccactccttttgctacgcttgcatcgcaaaatcagtg
gaactccatcgacgctgtccaaaatgtggagcagcgttagccggacgagatcactacttc
cccaacttcctgctaaacgaattagtggcaaggagaagattgaggtcaagaccccaagtg
gtcagtggaccagtggcggcttcaccaggtccggacgcggagcgtcttagagcccttcta
gcatccgaggctaggcatctagcgttgcctgatgtggaagggatgttggacgttttgacg
agaaggaagaggttgttggaggcggagtcggccgctgctcatcacaggctgttgtatgag
tttctggcgcagttgttgagacataggacgcaccagttggaacagttgtcgcgtgaagcc
gcgctggtgaaaaaggacatggaacacgtagccggagtgctacgggatctgcgatctggt
gctactgagctagggcggctaccttcaccctcggagccgccttcgctatcaggctctgtc
agggatgtccgccctagactgggagaacttggggagaccgcacccaggagcccaccagct
gaggaggaagagagtttcgcgagcactggtggaggtacgggagatgctttggcggcgcgg
tggagacgcctcacagcgcactttgatgactttgtacagtgctacttcgcgcaccgcgcc
gacgagctgtacttcccgggctcgggctccgccacgccggcgcccccgggccccccgggg
cccccgcccgcgccgcccgcgggcgccgcgcgcggggccgcgctcgccgaccccgtgccg
cagcaggcttccgcccccgagaccagggcctccagcgctgcaggggaccagcgcgctccg
gagggcgacccgccccccagcagtgcgaccgtgccccctgcccctccagtttcaggaggg
ccccccgcccctccagtgtccggggggccccccggcggcggagagggctttggagggctg
gaggccttccgcgaggacctcgccgccttcacccgctacagggcgctccgccctcttgcc
acgctgtcttactgcagcgacgccatcaactactccaccatcgtgtccaccatagagttc
gataaggacgatgagttcttcgctatcgctggagtaacgaagcgtatcaaggtattcgag
tttgaagcggtggtccgagacgcggtagacgttcactacccggtcgcagagatgcagtgc
tcgcacaagatatcgtgtgtatcgtggaacgcgtaccacaagaacgtactcgcctcctcc
gactacgagggtactgtgagcgtttgggacgcgggggcgggggttcgaacccgcgcgcta
caagaacacgacaaacgcgcctggtccgtacacttcaaccgggccgatgtacacttacta
gcctcggggtccgacgatgcccgtgttaagctatggtctctaaacgcggaacgctctgtg
gctactttggaagctaaattcaacgtatgctgtgttagattcaacccgcgatcctcctgc
catctagctttcggatcggcggaccactgtgtacactattacgatttaagagccccgcgt
gccccgctggctgtgttccgggatcatcggaaagccgtgtcctatgttaagtttgtggac
gcccgtacgctggtatcggcctcgacggattctcagctgaagctatggagagttgagtcg
cctcgctgcgtgagaagtttcacgggacacgcgaatgaaaagaattttgttggattagcg
acggacgggcgctatgtggcttgcgggtcggagaataatgctctgtatgtttattatacg
gggttatcgagaccgctgttggcatacaggttcgatgccgtgcggggatttttggagagg
gaacggagagacgaggaaccggctgagtttgtgtcagcggtgtgctggcgacgatccgca
gaccggcccgcgttactagcagctaatagccagggaaccattaaggtgttggagctggtg
tag
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integrated database retrieval system
