Melitaea cinxia (Glanville fritillary): 123667156
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Entry
123667156 CDS
T09237
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123667156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcix03041
]
123667156
Spliceosome [BR:
mcix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123667156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
123667156
NCBI-ProteinID:
XP_045457082
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Position
27:complement(1278153..1305223)
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AA seq
534 aa
AA seq
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MSDDEEVIAVKKPRQVHYGSLEEQEKARLAALAAAAKEGVEEGGKELGDIQISNEYMELE
DEMSKDKKALLDEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRDL
LSYLGEDAIHKKLEEEEARIERDRGREGTWYHEGPPELRDARLWIARYSLPRAKRRLNKA
REELQLAGSVRAAAKQESQRRASAISIYCSQIGDTRPISFCRFSGDSQMLITSSWSGLVK
VWSVPDCKLLQTLAGHTCNVSAAVFHPNAEMPHHFRQMVENENNEEMKSTTDMDTSDESS
KTVSMASCAYDGSVHLWNFASKSPMASLEGHGPSRVARVEFHPSGRFLATTVFDHSWRLW
DLETQKEVLHQEGHAKPVYSIAFQCDGSLVVTGGLDAFGRVWDARTGRCVMFLEGHLGAV
LGADWAPAGHRCATAGADHQAKIWDLRRRAPIYTIPAHTHLLSDVRYQKSHGHFLLTSSY
DKSVKLWSNPAWHPLRTLSGHDNKVMSADISMDNKYIATCSYDRTFKFWSPELA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagaagtgattgccgtgaagaagcccagacaagtccattatgggtcc
ctcgaggagcaggagaaagcccggctggcggctctggccgcggccgctaaagaaggagtc
gaagaaggtggaaaagaacttggagatatacaaatctccaatgaatacatggagttagag
gatgaaatgtcgaaggacaaaaaggctttactcgatgagtttgagagacggaggaaggct
cgccagttgaacgtgtccactgacgatgatgaggtaagaaggagtctccggcagctcggt
gagccggtctgcctgttcggagagggtccggctgagcggagagtgaggttgagggacttg
cttagctatctgggtgaggacgcaatacacaagaagttagaagaagaagaagctcgtata
gaaagggacagaggtcgggagggcacctggtaccacgaaggccctccagagctgagggac
gctaggctgtggatagctaggtattcgttacctagggccaagcgtaggttaaataaagca
cgtgaggaactacagttagctggcagtgtaagagcggccgctaagcaagagtcgcagagg
agggcgtccgctatctccatatactgcagtcagatcggtgacacgagaccaataagcttc
tgcagatttagcggtgacagtcagatgttgatcacgtctagctggtctggtctggtgaag
gtctggtcggtgccagactgcaagctgcttcagaccctagcgggtcacacgtgtaacgtc
agcgccgccgtgttccacccgaacgctgaaatgccccaccattttaggcaaatggtggag
aatgaaaataatgaggaaatgaaatcaacaacagacatggacacaagcgacgagtcgtcg
aagacggtgtcgatggcgtcctgcgcttacgatggctccgtacatctgtggaactttgcc
agcaagtcccccatggcttccctggagggtcacggcccgtcccgcgtggcgcgcgtggag
ttccacccgtcgggccgcttcctcgccaccacggtcttcgaccactcctggaggctgtgg
gacctggagacacagaaggaagtactgcatcaagaaggccacgccaaacccgtgtacagt
atagccttccagtgcgatgggtctctcgtagtgactggcggcctggacgcgttcgggcgc
gtgtgggacgcgcgcacgggccgctgcgtgatgttcctggaggggcacctgggcgccgtg
ctgggcgccgactgggcgcccgccggacaccgctgcgccaccgccggcgccgaccaccag
gccaaaatctgggacctacgtcgacgcgctccaatatataccatacccgcccatacgcac
ttactgagtgatgtgagatatcaaaagagccacggccacttcttgctgacgtcgtcatac
gacaagagtgtcaagctctggtcgaacccagcctggcaccccttgaggacattatctgga
cacgacaataaggtgatgagcgcagatatatctatggataacaagtacatagctacctgc
tcctacgacaggaccttcaaattctggtctccggaactagcttaa
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