Melitaea cinxia (Glanville fritillary): 123668309
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Entry
123668309 CDS
T09237
Name
(RefSeq) TBC1 domain family member 1
KO
K17902
TBC1 domain family member 4
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcix04131
]
123668309
Membrane trafficking [BR:
mcix04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123668309
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
123668309
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
123668309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
BORCS8
PTB
SIN1_PH
Motif
Other DBs
NCBI-GeneID:
123668309
NCBI-ProteinID:
XP_045458026
LinkDB
All DBs
Position
30:complement(3278655..3348529)
Genome browser
AA seq
1408 aa
AA seq
DB search
MHPNRPLFGSHSDTSAINMKQLVTDLFTQMREPSPGAPSPKGSTGSLNVTRNAGFQQQNG
AEHLPWSNPAMSLSGNCSSNLTNETSGLVRTVSNASALTSLCADLSPSDSHFFEVLYIGK
VRISQRKVPESLIDDALNKFAQHEAEKIKNSRRHSLLSSSRASQDSTDSDLKNSPEHAIE
QFGRNNLIPSTTPLEPDKNIAWKSAENLQKAENNEIDKEFDVFTKERVEKNCKQYVPLEP
TVLVINVPKNNLGTVTENEERHDDITESPNINQIINSTDSKDLTNVSKNHCKGTDVNNQT
GVDPLLHVPVEVKSNVKTCEVKLNKKKVENENKIFGEINRKPNNVDEERNNLVTENKPYL
RDRSASIGTLNLKTPLAHLIGEQNRTMLFQVGRSELRLISPDRKQILLHRAFKDVASCVL
GRINKEHFGFVCRETNDYACYVFKCESDSVATEVVNAIKQAFVAHADLLKKSRDKSPNMT
CEHCPMLWYHRLCHDIEGLNEKKIHAFILRRIEQLPDDEQELIITKYQGGTNHMYEVSEH
NAFLMMLLRAHCEAKQLRHVHDTAENRSEFLNQYLGGSTIFMKAKRSLSSGFDHLLKRRL
SKDDVHKKETSPIQSPSVIETPTDPNNSDLLTPTDTNRCKSLSPNNAMDQPSSPKSNNVS
FDDGVEDNKEETSVNSPMMDIFLKVSDSRATANESGNESDATWRQAIYEKVVQPGKDEGD
LQQTNLLGHPVSPPGKRTKEQLRQLWKMAIDQTILLVRMEKENAKLKEKEESSAVRRIKL
EYTELGTCDTGATCMWDSLLARDSSHPIAKVDRHMLKQAVRQGIPRTSRGGVWYFLAEQA
ALAGAPPDARAFPLYHTPYRALLAGLTKHQHAILIDLGRTFPKHSYFASALGPGQLALYN
ILKAYSLLDPDVGYCQGLSFVAGVLLLHMDEAEAFTLLRHLMFRRGIRKQYLPDMSALQV
QLYQLSRLLRDHEPELHAKLESLDISPALYAAPWMLTLFTSQFPLGFVVRVFDLIFLESF
EVVFSVSLALLSAHRDGLMMCESCEEAAEYLKHKLPDMDKAIYEKVMKTVSKLDISRQLT
EYAVEYSVLREEMPRLATLTEQNRHLQEDVNKMSAELDSAMDAIENYQKTQTRLETQNKM
MEQHLTLLSRYISAHHKQDLPNEIKKIVQNYSKKLSFGSKIITKLTSNDTDDDFRKNFKQ
GMSTPNLFSKITNEDVLNAINKERNIEDRKQFLMKKSQSVHSGLISNKHFPLKVLEEKTE
EVPRRDSLRIDNLANDNIRNLGRKTSGFFANTHEQIRQERLFEQQLKHDFDENLKKLDEK
LTKSLTPKSYLDDLAIFQSKKSMSLNLNANNVQDKVNDSGFVTPLSPNDSFKKDNITISH
PLSGCDVDIKFDGQLTKLKQIRPLKSNN
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgaatagacctttattcggatcccactccgatacatcggctataaatatgaaa
cagttggtgacagatctcttcactcagatgcgggagccttccccaggggctccaagcccc
aagggatcaaccgggtcactgaatgtcaccagaaatgcagggtttcaacagcagaatggc
gctgaacatctaccttggagtaaccctgcgatgtccctgtctgggaactgtagttcaaat
ttgaccaatgaaacatcagggctggttcgtacagtgagcaacgcctctgctctgacgtca
ttgtgtgctgatctctcgccatctgactctcacttttttgaggttctgtatattggaaaa
gtacgaatctcccaaagaaaggttccagaatcattaatagatgacgctttaaataaattc
gcccagcatgaagctgagaagatcaaaaatagcagacgacacagcttattgtcttcctct
cgggcttcccaagatagcaccgattcggacctaaaaaattcacccgaacatgcaatagaa
caatttggacgtaacaatttaataccaagcacaacaccattagaaccagacaagaacatc
gcttggaagagcgctgaaaacttacagaaagcagaaaacaatgaaatcgataaagaattc
gatgtttttactaaagagcgtgttgaaaagaattgtaagcaatacgtgcctttagaacct
acagtattagtgattaacgtgccgaaaaacaacttgggcactgttacggaaaatgaggaa
agacacgatgatataacagaaagtcctaatataaaccaaataataaatagtactgattct
aaagatttaacaaatgttagcaaaaaccattgtaaaggaacagacgtaaataaccaaaca
ggagtcgatccgttgcttcatgtaccggtcgaagtaaaaagcaatgtcaaaacatgtgaa
gttaaactaaataaaaaaaaagtagaaaacgaaaataaaatttttggagagataaataga
aagcctaataatgttgatgaggaaaggaataatttagtgactgaaaataaaccttattta
agagatcgatctgcgtctattggtactttaaatttgaagacgccgctagctcatttgatt
ggagagcagaatagaacaatgctatttcaggttggtcgctcagagctacgtcttataagt
ccagataggaagcaaatattattacaccgtgccttcaaagatgtggccagctgtgttctt
ggtaggataaataaggagcattttggtttcgtctgtagggagaccaatgattatgcttgc
tatgtatttaagtgtgagagtgattctgtcgctactgaagtcgttaatgcaataaagcaa
gctttcgtagcgcatgctgatcttttaaagaagtctagagacaaatctccaaatatgaca
tgtgaacattgtcctatgttatggtatcatagactatgccatgatattgaaggtttgaat
gagaagaaaatacacgcgttcatactccgacgcatagaacagcttcctgatgatgaacag
gaactaatcataacgaagtaccaaggaggcactaatcatatgtatgaggttagtgaacac
aatgctttcctaatgatgctcctacgtgctcactgtgaagcgaagcaactacgccatgtc
catgacactgcggaaaatagatcagaatttttgaaccaatacctaggtggtagcactata
ttcatgaaagctaaaagatctctgtccagtggttttgatcaccttcttaagcgaaggctg
agtaaagatgacgtacataaaaaggagacatccccaatacaatcaccaagtgtgatagaa
acgccaacagatccaaataactcagatctcttgacaccaactgatacaaaccgctgtaaa
tcattatcaccgaataacgcaatggaccaaccctcatccccaaaatcaaacaacgtgtcc
ttcgacgatggagtagaagacaataaagaggagacatcagtcaactcgcctatgatggat
atttttctaaaagtaagcgactcgcgagctaccgccaacgaaagtggaaatgaatcagac
gcgacatggcgtcaagctatatatgaaaaagtcgtacaacctggcaaagatgaaggtgac
ctacaacagactaatctcctaggacacccagtgtcgcctcctggtaagagaacaaaggaa
caactacgtcagctgtggaagatggcgatagaccaaactatattacttgttaggatggag
aaagaaaacgctaagttaaaagaaaaagaagagtcgtcagcggtgagacgaataaagttg
gaatacactgaacttggaacctgtgatactggagcaacttgtatgtgggattccttgcta
gctagagattcatcccatcccatcgctaaagtggataggcatatgctgaaacaagcagta
agacaaggcatcccccgcacgtctcgaggtggcgtgtggtacttcctggcggagcaggcg
gcgctcgcgggcgcgccgcccgacgcgcgcgccttcccgctctaccacacgccctaccgc
gcgctgctggccggcctcaccaagcaccagcacgccatactgatcgacctgggacgtaca
ttccctaagcactcctacttcgcatcggcccttggaccgggacaacttgcgctgtacaac
atactgaaggcgtattcccttttagaccccgacgtgggctactgccaaggactgagtttt
gtggctggagtcttattgttacatatggatgaagctgaagcgttcactcttttaagacat
ttgatgttcagaagaggtatcaggaagcaatacctgccggatatgagcgctttacaagtt
caactgtaccaactgtcccgcctactccgagatcacgagccagagctccacgctaaactg
gaatctctggacatatctccagctctatacgcagcgccttggatgctgacactcttcacc
agccagttccccctgggcttcgttgtcagggtatttgaccttatcttcctggaatcattc
gaagtggtattctcagtatcgttggcccttttatccgctcatagggacggtctgatgatg
tgtgagagttgtgaggaagcagcagagtacttgaaacacaaattaccagatatggacaag
gcaatatatgaaaaagttatgaaaacggtctcaaaactcgatataagtcgtcagttaaca
gaatacgcagtagaatacagcgtgttaagagaagaaatgccaagattagcaactctgact
gaacagaatagacatttacaagaagatgtcaataaaatgagcgctgaacttgattctgca
atggacgcaattgagaactaccaaaaaactcaaacccgtctcgaaacccaaaacaaaatg
atggagcaacacctgactctactcagtcgctacatatccgcccaccacaaacaggatcta
ccgaatgaaatcaagaaaatcgtccaaaactacagcaagaaactatcttttggatccaag
atcataaccaaattgacctcaaatgatacagacgatgatttcagaaagaacttcaagcaa
ggcatgagcacgccaaatcttttctccaagattacaaatgaggatgtcttaaatgctatc
aataaggaaaggaatatagaagataggaaacaattcctaatgaagaaatcccaatcagta
cattctggattaatatcaaacaagcatttcccacttaaggttctagaagagaaaaccgaa
gaagtcccaagaagagacagtctaagaatagataatctagcaaacgataatataagaaat
ttgggcaggaaaacgtctggatttttcgcgaatacccacgaacagatacgacaggaaagg
ctatttgagcagcaattgaaacacgattttgatgaaaatctaaagaaattggacgaaaaa
ttgaccaaatcattaactcccaagtcgtatttggatgatttggccatatttcagagtaaa
aagagcatgtctctcaatttaaatgctaataatgtacaagataaggttaatgatagcggt
tttgtgactccgctatcgcctaatgatagttttaaaaaagataatataactatatctcat
ccgctcagcggttgtgatgtggatataaaatttgatgggcagttaacaaagttgaagcaa
atacgaccattgaaaagtaacaactaa
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