Melitaea cinxia (Glanville fritillary): 123668621
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Entry
123668621 CDS
T09237
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcix04040
]
123668621
Ion channels [BR:
mcix04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123668621
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
123668621
NCBI-ProteinID:
XP_045458296
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Position
Z:complement(13475447..13495184)
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AA seq
1204 aa
AA seq
DB search
MKTDAGGEMQIMLPNQTQDGINSGDVCLLAESPYRILRAAESGNAEDFKRLYLTEPSRLS
LQDTRGRTAAHQAAARNNTNILQIIVNYGGDLNVTDKSGNTPLHVAVECDSLDAIEFLLS
QXVNPNILNEKSQAPIHLATELNKVTVLQVFVKFKSAFNVDLGGEHGRTALHFAAIHDHD
ICARILITELGAECKRPCNNGYYPIHEAAKNASSRTMEIFLQWGESKGCTRERMIALYDN
EGNVPLHSAVHGGDIRAVELCLKSGAKISTQQYDLSTPVHLACAQGALEIIQLMFSIQPE
EKNACLKSCDVQKMTPLHCAAMFDHPDIVSYLISEGADLNPLDKEKRSPLLLAASRAGWR
TVHVLIQLGADVELKDVNNRNVLHLVVMNGGRLEDFAATCKNRCEKSLTKLLNEKDNTGC
SPLHYASRAGHIRSLQNLIKLGACINLKNNNNESPLHFAARYGRYNTVCQLLNSDKGAFV
INESDGEGLTPLHIASREGHARVVHLLLNRGALLHRDHSGRNPLHLAAMYGYTQTIELLH
SVHSHLLDQSDKDGNSPLHLATMENKPNSIALLLSMGCRLSYNNLDLSAIDYAIYYKFPD
AALAMVTHEQRANEVMALRSDRYPCVTLALIAGMPNVFEAVQDNCITKANCKKDSKSFYI
KYNFRVFSPKTKTDDDNNRKPESALKSQNIPLAALNIKYSFRYYQYSKRRLEALRQARND
PNYRPEPLSVINAMVAHGRVELLAHPLSQKYLQMKWNSYGKYFHLANVLFYCIYLTFVTL
FTYKLMSFLFQKGISDFXERLLMLKLLLILMVKINKMEYTLPDFEAKVVIYTSTVAVLFY
NLMCLIRELCNMKDQKWHYIVDPSNFVSWTLYISSTLTVLPSLYPMYENIQLSAASITIF
LSWFHLLLLLQRFDQVGIYVVMFLEILQTLIKVLMVFSILIIAFGLAFYVLLSKVGDGLM
VFIKSNRSTYNGQHLSFSSIPMSLIRTFAMMLGELDFVGTYVQPYYKSETETNLPFPIPT
FFILVLFMVFMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPKFCLDR
VDKDELIEYPNNKKCKLGFLDLILRKWFCNPFSDESNGLDFVLESEDFISAELDKQKRKL
REMTKSLDQQYTLLRLIVQKMEIKTEADDVDEGVSATEARVVPRWSSPRIRKKLRTASSF
NRGG
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgatgcgggaggggaaatgcaaataatgttgccgaaccaaactcaagacgga
atcaactccggtgacgtatgtcttttggcagagagcccatataggatacttcgggccgct
gaaagtggaaatgctgaagacttcaagcgtttatatttgacagaaccttcgcgactgtcg
ctacaagatacaagaggacgtactgcggcgcatcaagcagcggccaggaataatacaaac
atattacaaattatcgttaattatggcggagatttaaacgttaccgataagtctggaaat
acgccattgcacgtagctgttgaatgtgattccctggatgcaatagaatttttgttaagc
cagtaagtcaacccaaacattttgaatgaaaagtctcaagcaccaatacatctggccaca
gagcttaataaggttactgtactgcaggtttttgtaaaattcaagtctgctttcaatgtg
gacttaggtggagagcatggacgaactgcattacattttgcagccatacatgatcatgat
atatgtgctaggattttgattactgaactgggggcagaatgtaaacgtccttgcaacaat
ggttactatccgattcacgaagcagcaaaaaatgcctcatccagaaccatggaaatattt
ctacaatggggtgaatccaaaggttgtacgagagaacgaatgattgctctctacgacaac
gaagggaatgttccccttcattcggcagtgcatggaggggatataagagctgtggagctg
tgtctgaaatctggtgcaaagatatctacccaacagtatgatctttctacgcctgttcat
cttgcatgtgcgcaaggtgctctagaaattatccagctaatgttcagcatccaacccgag
gaaaagaatgcgtgtctaaaatcatgcgacgttcaaaaaatgacaccgctacattgcgct
gccatgtttgaccatcccgatattgtgagctatttaattagcgaaggtgcagatttgaat
cccttagataaagaaaaaagatcgccattacttcttgcagcttcgagagctggatggagg
actgttcacgttttaattcaactgggtgctgatgtagaacttaaagatgtgaataatcgc
aatgtccttcacttggtggtgatgaacggaggtcgtttagaagattttgcagcgacgtgc
aagaatcgctgtgaaaaaagcctaacgaaacttcttaacgaaaaagacaacactggctgt
tcgccactacactacgcaagtcgcgcgggacacatccggtccttgcagaacctcataaaa
ctcggcgcctgcatcaacttaaagaacaataacaatgagagcccgttgcacttcgctgca
aggtacggacgttacaatactgtgtgtcagttattaaattctgacaaaggcgctttcgtg
ataaacgaaagcgatggcgagggactgacacccctgcacatcgcttcacgagaaggccac
gcgagggtcgtgcaccttctgctaaaccgcggtgcgttactgcatcgtgatcacagcggt
cgcaatccgctccatctagcggccatgtacggatacacgcaaacaatagagctgttacac
tctgttcattcgcacttgcttgatcagtcggataaagatggcaattcgcccctacatttg
gctacaatggaaaataaacctaattccatagcattactgctatctatgggatgtcgccta
agttacaataatctagacttaagcgctattgactacgccatctattataaattccctgac
gcggcacttgctatggtaacgcatgaacaaagagcgaatgaagttatggcattgcggtcg
gaccgatacccttgcgtgacacttgctctcatcgcgggaatgccaaacgtcttcgaagca
gtgcaagataactgcataacaaaagccaactgcaaaaaagattctaaaagtttttatatc
aaatacaactttcgggttttttctccgaaaacaaaaacagacgacgataacaacagaaaa
ccagagagtgctctgaaatcccagaatattccattagcagcactgaacattaagtactca
ttcagatactaccaatactcgaagcgtcgtctagaagcgctgagacaggcgcgcaacgac
ccaaactatcgtcccgaaccgttgagtgtgatcaacgctatggttgctcacggacgcgtg
gaactgctagctcacccactaagccaaaaatacttgcagatgaagtggaattcatatgga
aagtatttccacctagcaaatgtacttttctactgcatttatcttacttttgtaacactt
tttacatataaattgatgagcttccttttccaaaaaggtatatcagatttttaagaacga
ctgttgatgctaaaattgttgttaatattaatggttaagatcaataaaatggaatataca
cttccagattttgaagcgaaggtcgttatttacacgagcacagtggcggttctgttttac
aacttaatgtgtctaatacgtgagctgtgcaacatgaaagatcagaaatggcactacata
gtggacccctcaaattttgtttcatggacgttatatatcagctcaacgctaactgtactt
ccgtcattatatccaatgtatgaaaatatacagctatcggccgcatcaataacgattttt
ttgtcctggtttcatcttctacttcttctccaacgtttcgatcaagttggaatatacgtt
gtgatgttcctcgagattttacaaacacttatcaaagttttaatggtgttctcaattctt
atcatagcttttggactagctttctacgtgctgttatcaaaagtgggtgatggcctaatg
gtatttattaaaagcaatcggtcgacgtataatggacagcatttgtcttttagcagcatc
ccaatgtcactgattcgaacattcgctatgatgctgggagaattagacttcgtggggaca
tacgtgcaaccatattacaaatctgaaactgaaaccaatttaccgtttccaatacctaca
ttttttattctcgtactatttatggtatttatgcctattcttttgatgaacttgcttatc
ggtttagccgttggtgacatcgaaagcgtccgacgaaatgcccaattaaaacgcctggct
atgcaagtggtgctacatacggaactagaaagaaaattacccaaattttgtctcgaccga
gtagataaggacgaacttattgaatatcccaacaataagaaatgtaaacttggattcctc
gatcttatcttgcgcaaatggttttgcaacccattttctgatgaaagtaatggcctcgac
ttcgttttggaaagtgaagattttatatcagccgagctagataaacaaaaacgtaagctt
cgggaaatgacgaaaagtcttgaccaacaatatacattattacgcctaatcgtacagaaa
atggaaataaagacagaagcggatgatgtagacgagggtgtctctgcgacggaggctcgt
gtcgtcccacgttggagctcgcctcgaatccgcaagaaattgcgcactgcctcatccttc
aatagagggggctag
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