Melitaea cinxia (Glanville fritillary): 123669441
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Entry
123669441 CDS
T09237
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123669441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcix03021
]
123669441
03036 Chromosome and associated proteins [BR:
mcix03036
]
123669441
Transcription machinery [BR:
mcix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123669441
Coactivators
SAGA/TFTC/STAGA complex
123669441
Chromosome and associated proteins [BR:
mcix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123669441
STAGA complex
123669441
TFTC complex
123669441
SAGA complex
123669441
SLIK complex
123669441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_HPS5
VPS8_N
Beta-prop_Vps41
Beta-prop_DCAF4
DUF7165
eIF2A
Tricorn_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123669441
NCBI-ProteinID:
XP_045459001
LinkDB
All DBs
Position
3:complement(10086239..10096293)
Genome browser
AA seq
651 aa
AA seq
DB search
MGDKSTPLLAVLQLLRKYDLKGTEEILRKEANLGDAEYENLDLPEVELASILTAHHTESD
PYSYEFAYESLKKFVENSLDVYKYELSTFLYPVFVHMYLILILYDHKEHAVKFLDKFGPE
QEDYYQEDLKRLAMVENKEQIKGNELAEIYNSNKFQVQLSRDASTQLKRYLHEQKSSPVI
INIINNHIQIDIHDGPGRTQAQVKSTIGGLLGEASRNDNRTKVYYGLLKEPDIQVLPPPV
EDEDEADETPDKPKKKKAKKDNIFMKKPKSDPNAPPNDRIPLPELKETDKIEKGKAIREA
SKRVPLGPDSLPSICFYTLLNSGQTAICADICDDSTLLAVGFNNSSIKVWTLTTNRLRGM
KSADKLQDIDREAGDVLVRMMEEKDRDTCRTLFGHSGPVYKVAFDPFKTMLLSCSEDSTV
RLWSLQCWTCLVVYRGHVWPVWDVRWSPYGHYFASGGHDRTARLWATDHHQPLRIFAGHH
SDVDCIQFHPNSNYIATGSSDRTVRVWDCLTGSQVRIMTGHKSTPFTLAFSTCGRWLASG
AGSGEIVVWDISTGLPTATLPPMHVAPVHALAFSRDGTLLCSGSLDSTIKLWDFSLITDE
NTSDEGGANNATQKEEKFLLRSFATKNSPIKNLHFTRRNLLLAVGSYEGSS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggagataaatcaactccacttttagctgttcttcaacttctacggaagtatgacttg
aagggtactgaagaaattttaagaaaagaagctaatttaggtgacgccgagtatgaaaat
ttagatttacccgaagttgaacttgctagtattctaacagcacatcatactgaaagtgac
ccttatagttacgaatttgcatacgaaagtctgaaaaaatttgtcgaaaattctttggac
gtatacaagtatgaactttcaacattcctgtatccagtatttgttcacatgtatttaatc
cttatattatatgatcacaaagaacatgcggttaaatttctggataaatttggtccagaa
caagaagattattatcaggaggaccttaaacggttggcaatggtcgaaaataaagaacaa
ataaagggcaatgaattagcagagatatacaactctaataagttccaagttcaactgtct
agagatgcatctacgcagttaaaaagatatttacatgaacaaaaaagttctcctgttatt
ataaatattattaataaccacattcagattgacattcatgatggtccaggtcggacgcaa
gctcaagtaaaatcgactataggtggactattgggagaagcttcaagaaatgataaccgt
acaaaagtttactacgggcttcttaaagagcctgatattcaagtgcttcctcctcctgtt
gaagacgaagatgaagctgatgaaactccagataaaccaaaaaagaaaaaggctaaaaaa
gataatatatttatgaaaaaacccaaatctgaccctaatgctcctcccaatgacagaata
ccattaccagaattaaaagaaacggataaaatagaaaaaggtaaagctattagagaagct
tcaaaacgtgtgccactgggccctgacagcctgccttctatttgcttctacacactacta
aatagtggccaaacagctatttgtgcggatatctgtgatgattccacgttactcgctgta
ggctttaacaattcttctattaaggtttggacattaactacaaatagattgcgtggtatg
aagtcagcagataaattacaagatattgatagagaagcaggtgatgttttggtgaggatg
atggaagaaaaagatagagatacatgtcgtacactatttggacactctggtccggtgtat
aaagttgcctttgatccatttaaaactatgctgttgtcctgctctgaagattctactgta
agactatggtctcttcagtgctggacatgcctagtagtgtatcgcgggcatgtgtggccg
gtgtgggacgtgcgctggtccccctacggccactattttgcgtcaggcggccacgaccgc
acagctcgcctctgggcgactgaccatcatcagcctctcagaatatttgccggtcaccat
tctgatgttgattgtatacaatttcacccaaattcaaattacattgccactggatccagt
gatcgcactgtcagagtttgggactgtttaacagggtcacaagttcgaataatgactggt
cacaaatcaacaccattcacattagccttttccacatgtggaagatggctggcctcaggt
gctgggagtggagaaatagttgtgtgggacatctcgactggcttgcctacagcaacgtta
ccaccaatgcatgtggcgcctgtacatgcgttagcttttagccgtgatggaaccctatta
tgttctggttccttagactctactatcaaactttgggattttagcttaataacagatgaa
aacacatctgatgaaggaggggctaacaatgcaacacaaaaagaagaaaaattcttgcta
cgatcttttgcaacaaaaaattcgcctattaaaaatttacattttactagacgaaactta
ttgttagctgttggatcatatgaaggaagttcataa
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