Melitaea cinxia (Glanville fritillary): 123670044
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Entry
123670044 CDS
T09237
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
mcix
Melitaea cinxia (Glanville fritillary)
Pathway
mcix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123670044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcix03019
]
123670044
Messenger RNA biogenesis [BR:
mcix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123670044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
123670044
NCBI-ProteinID:
XP_045459508
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All DBs
Position
4:5692576..5697181
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AA seq
375 aa
AA seq
DB search
MKEVFLSNCEKSFIQKIISEGHRLDGRNYNDSRQLNISFGSQYGSCIVSLGETKILSQVS
CEVVQPKQIRPNEGILYINVEISPMAAPQFEANRQTDLTVYLNRLLEKCYKDSKCIDLES
LCIVVEEKVWSLRVDIKVLNHDGNLIECASIATLASLAHFKRPDVTRSGEKVIIHTLAEK
DPIPTVLYHYPVCSTFAIFNNNILISDPSFIEESVCASNSEEGNISGGLLVVGMNQYKEL
CLLNLTGAAIYNSSIVHRATLSAADKCKSIVDLVKKTIISDDNLRQKRVKINFGDIITSD
HVQSLSRKDLSICLKNFDHNVKSLPKDEEMMDDQSDVEIEPSKYDVVPSLPQTAEIKAKK
GASNWIEISSDSEED
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtatttttatcgaattgtgaaaaaagttttattcaaaagattatatcagag
ggtcatagattggatggtagaaattataatgatagtcgtcaattaaatatatcatttggt
tctcaatatggaagttgtatcgtctccctcggtgaaaccaaaatattatcacaagtgtca
tgtgaagttgtgcaaccaaaacaaataaggcctaatgaaggtattttatacataaatgtt
gaaatcagcccaatggctgcgccccagtttgaggctaaccgtcaaacagatctcacagtt
tacctcaaccgattattagaaaagtgctacaaagattctaaatgtatagacctagaatca
ttatgtatagttgttgaagaaaaggtttggtcactgagagtcgatataaaagtattaaat
catgatggcaacctcatagaatgtgctagtatagccacattagcttcattagctcacttt
aagcgtccagatgttacacgcagtggggagaaagttatcatacacacattagcagagaag
gatccaataccaacggtgttatatcattatccagtgtgctcaacatttgctatatttaat
aataacatacttatatcagatccaagttttattgaagaatctgtgtgtgcaagtaattca
gaggagggaaatataagtgggggtttgctggtggttggcatgaaccaatacaaggagtta
tgtttattaaatctcaccggggctgcaatatataactcaagtattgtgcatcgagcaact
ctcagcgctgctgacaagtgtaaaagtattgttgatttagtaaagaagacaataataagt
gatgacaatttaagacaaaaaagagtaaaaataaattttggcgacatcataacaagtgat
cacgtgcagtcattgagcagaaaagatctcagtatttgtcttaagaactttgatcataat
gttaagtcattaccaaaggatgaagaaatgatggatgatcaatccgacgtagaaatagag
cccagtaaatatgacgttgttccatcattacctcaaacagcggaaataaaagcaaaaaag
ggtgcttcaaactggatagaaatatcatcagactccgaggaagactga
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