Methanothrix soehngenii: MCON_0086
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Entry
MCON_0086 CDS
T01468
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mcj
Methanothrix soehngenii
Pathway
mcj00220
Arginine biosynthesis
mcj00240
Pyrimidine metabolism
mcj00250
Alanine, aspartate and glutamate metabolism
mcj01100
Metabolic pathways
mcj01110
Biosynthesis of secondary metabolites
mcj01240
Biosynthesis of cofactors
Module
mcj_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
MCON_0086 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MCON_0086 (carB)
00220 Arginine biosynthesis
MCON_0086 (carB)
Enzymes [BR:
mcj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
MCON_0086 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
ATP-grasp
CPSase_L_D3
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_3
ATP-grasp_5
ATP-grasp_2
DUF4176
Motif
Other DBs
NCBI-ProteinID:
AEB66999
UniProt:
F4BTW6
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All DBs
Position
complement(83111..86323)
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AA seq
1070 aa
AA seq
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MPKREDINKIMIIGSGPIVIGQACEFDYSGTQACKALKALGYKIVLVNSNPATIMTDPGM
ADATYIEPLNVERLAQIIEKERPDALLPNLGGQNGLNLSLELARAGILDKFNVMVIGVKL
DAIERGEDRIIFKETMNSLGIEVPKSTAIYTVEDAEKVALDLGYPVVVRPAYTMGGTGGG
LVYNAEELRTVVSRGIAASLIGQVLIEESVAGWEELELEVVRDSKNHMITVCFIENVDAM
GVHTGDSFCTAPMLTISQELQDKLQDYSYRIVEAIKVIGGTNIQFAHDPKTGRVVVIEIN
PRTSRSSALASKATGFPIALISAKLASGLTMDEIPYWKEGTLEKYTPSGDYVVVKFPRWA
FEKFRGSKDVLGTQMKAVGEAMSIGKSYKEAFQKAIRSLENSRYGLGFARDYNSRSPEEL
MMLLKETSSERQFILYEAIRKGADIQKLYQLTHIKPWFLQQMKELVQLEEEILAYKGKPL
VDLPDELLSQAKKDGFADRYLSKLLAVPEAEIRARRKSLGIVQGWEPVPVSGVENAFYYY
STYNAPDRTPSSSRRKVMVLGGGPNRIGQGIEFDYCCVHAAFALRDMGIETIMVNCNPET
VSTDYDTSDKLYFEPLTVEDVLSIYEKEKPEGVIVQFGGQTPLNISRELEDAGVKILGTS
VDAIDLAEDRDRFRMMMEELDIPMPESGMASNLDQALEVAKRIGYPLMVRPSYVLGGRGM
EVIYDEEMLERYVAAAVDVTPERPILIDRFLENALETEADALSDGKEAFVPAVMEHIEQA
GIHSGDSACVIPPVSISGEHLQTIEEYTRKIAQKLHVVGLMNMQYAISHDVVYVLEANPR
ASRTVPLVSKVCNVSMARIATQMMMNKRMDELGLKKRNIPHYGVKESVFPFNMFPEVDPL
LGPEMRSTGEVLGLADSFGMAFYKAEEAAKPSLPQEGTVMITVAAKDRSMELVEVAREFQ
KLGFRIMATSGTRAVLKENGIPSEMIKKIYEGRPNIDDAIKNKEIQLVINTPIGKASQYD
DSYIRKAAIKYKVPYITTIAAASAAAKGISASRAGHSAAKSLQEYHSDIK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgaagatataaacaagatcatgatcatcgggtctggccctatcgtaatc
gggcaggcctgcgaattcgattactctggcacccaggcctgcaaagcgctcaaggccctg
ggatacaaaatagtccttgtcaactccaatccggccaccattatgaccgatccgggcatg
gcagatgccacctatatcgagccactcaatgtcgagaggctggcccagatcatcgaaaag
gagcggcctgatgccctgctaccgaacctgggcgggcagaacggcctcaacctgagcctt
gagctcgcccgcgcaggcatcctggacaagttcaatgttatggtcataggggtgaagctg
gatgccattgagcggggggaagacaggatcatcttcaaggagactatgaactccctgggg
atcgaggtacccaagagcaccgcgatctatacggtggaggacgcagaaaaggtagccctg
gatctcggctacccggtggtcgtccggccggcctacaccatggggggaacaggaggcggt
ctggtctataacgccgaagagctgaggaccgtggtcagccggggaattgccgccagcctg
atcggccaggtgctcatcgaggagtcggtcgcaggatgggaggagctggagctggaggtg
gtcagggattccaagaatcatatgatcaccgtctgcttcatagagaacgtggacgccatg
ggagttcataccggcgattccttctgtaccgcccccatgctaaccatatcccaggagctt
caggataagctgcaggactactcctaccggatcgttgaggccatcaaggtcatcggcggg
accaatatccagttcgcccacgatccgaaaaccggaagggtggtggttatagagatcaat
ccaaggacatcccgctcatccgccctcgcctccaaggccaccggctttcccatcgccttg
atctcggcaaagcttgcctctggtctgaccatggatgagataccctactggaaagagggg
acactggaaaaatacacgccctcgggagattatgttgtggtcaagttcccccgctgggcc
ttcgagaagttccggggctcaaaggacgtactcggcacccagatgaaggcagtgggcgag
gcgatgagcatcggcaagagctacaaggaagccttccagaaggccatacgctctttggag
aacagcaggtacggcctgggctttgccagggattacaacagcagatctccggaagagctt
atgatgcttcttaaggagacttcaagcgagcggcagttcattctctatgaagcgatccga
aagggtgccgacatccaaaagctctatcagttgacccatatcaagccctggttcctccag
cagatgaaggaattggtccagctggaagaagagatattggcctacaagggtaaaccactg
gtcgatctcccagatgagcttctcagtcaggccaaaaaagatggctttgcagaccgatac
ctctcgaagcttctggccgtcccagaggctgagatccgggcgcggcgcaagtccctggga
attgttcagggctgggagccggtacctgtaagcggggtggagaatgccttctactattac
tctacatacaatgctcccgataggaccccgagcagcagcaggcgcaaggtcatggtcttg
ggtggagggcccaaccgcatcggccagggcattgagttcgactactgctgcgttcatgcc
gcttttgccctgagggatatgggcattgagaccatcatggtcaactgcaatccagagacg
gtctccaccgattatgacacttcggataagctgtacttcgagcccttgacggtcgaggat
gtgctcagcatctatgagaaggagaagcctgagggggtcatcgtccagttcggcggccag
acgcctctcaatatctcccgggagctggaggatgcaggggtgaagatcctggggacatct
gtggatgccatagacctggccgaggacagagatcgattcaggatgatgatggaggagctg
gacatacccatgccggaatcgggaatggcaagcaacctcgaccaggcgctggaggttgcc
aagaggatcggctatcccctcatggtgcggccttcatacgtcctggggggacgggggatg
gaggtgatatacgacgaggagatgctggagcggtacgttgccgcggcagtggacgtcacc
ccagagaggcccattctcatcgaccgattcctcgagaatgctctggagacggaggcagat
gccctctccgacggcaaagaggcctttgtgcccgcagtgatggagcatatcgagcaggcg
ggcattcattccggcgattcggcttgcgtaattccgccagtgagcatctccggcgagcat
ctgcagaccattgaggagtacacccgcaagatagctcagaagctgcatgtggtgggcttg
atgaatatgcagtatgccatcagccacgatgtggtctatgtgctggaggccaatccccgt
gcttcccggacggtgccgctggtatccaaagtgtgcaatgtatcgatggccaggatagcc
acccagatgatgatgaacaaaagaatggacgagctggggctgaagaagagaaatatccct
cattatggtgtcaaagagtctgtcttccccttcaatatgttccctgaggtcgaccccctc
ttgggcccggagatgagatccactggagaggtcctggggcttgccgactcattcggcatg
gccttctataaagcggaggaggctgccaagccctcgcttccccaggaggggacggtcatg
atcaccgtggccgccaaggacagatctatggagctggtggaggttgcgcgggagtttcag
aagctcggctttagaattatggccaccagcgggaccagagcggtcctgaaagagaatggc
atcccgtcggagatgatcaagaagatctatgagggccggcccaatatcgatgatgccatc
aaaaacaaggagattcagctggtgataaacacccccatcggcaaggccagccagtatgat
gattcttatatccgaaaggcagcaatcaaatacaaggtgccctatattaccaccattgct
gctgcttcggcggcggcaaaggggattagtgcctcaagagcaggccattcagcagcgaaa
tcgctgcaggagtaccacagtgatataaagtag
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